RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 CD5P06127 495 aa11.48□□□□□ -0.57
CPNE1-201ENST00000317677 FAM157CP0CG43 387 aa11.48□□□□□ -0.57
CPNE1-201ENST00000317677 RD3LP0DJH9 198 aa11.48□□□□□ -0.57
CPNE1-201ENST00000317677 CALCBP10092 127 aa11.48□□□□□ -0.57
CPNE1-201ENST00000317677 ACKR3P25106 362 aa11.48□□□□□ -0.57
CPNE1-201ENST00000317677 CASRP41180 1078 aa11.48□□□□□ -0.57
CPNE1-201ENST00000317677 RAC1P63000 192 aa11.48□□□□□ -0.57
CPNE1-201ENST00000317677 MFGE8Q08431 387 aaPredicted RBP11.48□□□□□ -0.57
CPNE1-201ENST00000317677 HIST3H3Q16695 136 aa11.48□□□□□ -0.57
CPNE1-201ENST00000317677 MST1LQ2TV78 715 aa11.48□□□□□ -0.57
CPNE1-201ENST00000317677 WDR38Q5JTN6 314 aa11.48□□□□□ -0.57
CPNE1-201ENST00000317677 TMEM225Q6GV28 225 aa11.48□□□□□ -0.57
CPNE1-201ENST00000317677 SLC18B1Q6NT16 456 aa11.48□□□□□ -0.57
CPNE1-201ENST00000317677 SLC25A47Q6Q0C1 308 aa11.48□□□□□ -0.57
CPNE1-201ENST00000317677 C11orf40Q8WZ69 217 aa11.48□□□□□ -0.57
CPNE1-201ENST00000317677 HAVCR1Q96D42 359 aa11.48□□□□□ -0.57
CPNE1-201ENST00000317677 FBXO17Q96EF6 278 aa11.48□□□□□ -0.57
CPNE1-201ENST00000317677 SLC25A44Q96H78 314 aaPredicted RBP11.48□□□□□ -0.57
CPNE1-201ENST00000317677 DERL3Q96Q80 235 aa11.48□□□□□ -0.57
CPNE1-201ENST00000317677 ASCL3Q9NQ33 180 aa11.48□□□□□ -0.57
CPNE1-201ENST00000317677 PLA2G3Q9NZ20 509 aa11.48□□□□□ -0.57
CPNE1-201ENST00000317677 MTFP1Q9UDX5 166 aa11.48□□□□□ -0.57
CPNE1-201ENST00000317677 CELSR3Q9NYQ7 3312 aa11.48□□□□□ -0.57
CPNE1-201ENST00000317677 CHD6Q8TD26 2715 aa11.48□□□□□ -0.57
CPNE1-201ENST00000317677 METTL21EPA6NDL7 271 aa11.47□□□□□ -0.57
CPNE1-201ENST00000317677 BTBD17A6NE02 478 aa11.47□□□□□ -0.57
CPNE1-201ENST00000317677 IFITM5A6NNB3 132 aa11.47□□□□□ -0.57
CPNE1-201ENST00000317677 F5H0A9 414 aaPredicted RBP11.47□□□□□ -0.57
CPNE1-201ENST00000317677 RNASEK-C17orf49H0YIS7 233 aa11.47□□□□□ -0.57
CPNE1-201ENST00000317677 RBBP9O75884 186 aa11.47□□□□□ -0.57
CPNE1-201ENST00000317677 RLN1P04808 185 aa11.47□□□□□ -0.57
CPNE1-201ENST00000317677 CSF1P09603 554 aa11.47□□□□□ -0.57
CPNE1-201ENST00000317677 TPT1P13693 172 aaKnown RBP11.47□□□□□ -0.57
CPNE1-201ENST00000317677 VAMP1P23763 118 aa11.47□□□□□ -0.57
CPNE1-201ENST00000317677 F2RL1P55085 397 aa11.47□□□□□ -0.57
CPNE1-201ENST00000317677 CLDN15P56746 228 aa11.47□□□□□ -0.57
CPNE1-201ENST00000317677 WIPI1Q5MNZ9 446 aaPredicted RBP11.47□□□□□ -0.57
CPNE1-201ENST00000317677 CARD17Q5XLA6 110 aa11.47□□□□□ -0.57
CPNE1-201ENST00000317677 FDX2Q6P4F2 183 aa11.47□□□□□ -0.57
CPNE1-201ENST00000317677 DNM1P34Q6PK57 102 aa11.47□□□□□ -0.57
CPNE1-201ENST00000317677 GLB1L2Q8IW92 636 aa11.47□□□□□ -0.57
CPNE1-201ENST00000317677 ZNF679Q8IYX0 411 aa11.47□□□□□ -0.57
CPNE1-201ENST00000317677 IL22RA1Q8N6P7 574 aa11.47□□□□□ -0.57
CPNE1-201ENST00000317677 OR51A4Q8NGJ6 313 aa11.47□□□□□ -0.57
CPNE1-201ENST00000317677 OR5M8Q8NGP6 311 aa11.47□□□□□ -0.57
CPNE1-201ENST00000317677 OR52N5Q8NH56 324 aa11.47□□□□□ -0.57
CPNE1-201ENST00000317677 RNF128Q8TEB7 428 aa11.47□□□□□ -0.57
CPNE1-201ENST00000317677 PIK3IP1Q96FE7 263 aa11.47□□□□□ -0.57
CPNE1-201ENST00000317677 MARS2Q96GW9 593 aaKnown RBP11.47□□□□□ -0.57
CPNE1-201ENST00000317677 PIGQQ9BRB3 760 aa11.47□□□□□ -0.57
CPNE1-201ENST00000317677 SLC25A18Q9H1K4 315 aa11.47□□□□□ -0.57
CPNE1-201ENST00000317677 RHOFQ9HBH0 211 aa11.47□□□□□ -0.57
CPNE1-201ENST00000317677 COMMD9Q9P000 198 aa11.47□□□□□ -0.57
CPNE1-201ENST00000317677 SLC22A13Q9Y226 551 aa11.47□□□□□ -0.57
CPNE1-201ENST00000317677 LRP12Q9Y561 859 aa11.47□□□□□ -0.57
CPNE1-201ENST00000317677 OR2AT4A6NND4 320 aa11.47□□□□□ -0.57
CPNE1-201ENST00000317677 ZNF705EA8MWA4 302 aaPredicted RBP11.47□□□□□ -0.57
CPNE1-201ENST00000317677 IFNA17P01571 189 aa11.47□□□□□ -0.57
CPNE1-201ENST00000317677 ZNF43P17038 809 aa11.47□□□□□ -0.57
CPNE1-201ENST00000317677 S100A2P29034 98 aa11.47□□□□□ -0.57
CPNE1-201ENST00000317677 SUCLG1P53597 346 aaKnown RBP11.47□□□□□ -0.57
CPNE1-201ENST00000317677 PHYHD1Q5SRE7 291 aa11.47□□□□□ -0.57
CPNE1-201ENST00000317677 TMEM69Q5SWH9 247 aa11.47□□□□□ -0.57
CPNE1-201ENST00000317677 FAAP20Q6NZ36 180 aa11.47□□□□□ -0.57
CPNE1-201ENST00000317677 LINC00696Q6ZRV3 163 aa11.47□□□□□ -0.57
CPNE1-201ENST00000317677 OR5AK2Q8NH90 309 aa11.47□□□□□ -0.57
CPNE1-201ENST00000317677 OR14L1PQ8NHC6 308 aa11.47□□□□□ -0.57
CPNE1-201ENST00000317677 ASB17Q8WXJ9 295 aa11.47□□□□□ -0.57
CPNE1-201ENST00000317677 ADGRG7Q96K78 797 aa11.47□□□□□ -0.57
CPNE1-201ENST00000317677 RHOVQ96L33 236 aa11.47□□□□□ -0.57
CPNE1-201ENST00000317677 DCBLD2Q96PD2 775 aa11.47□□□□□ -0.57
CPNE1-201ENST00000317677 ZNF385AQ96PM9 386 aaKnown RBP11.47□□□□□ -0.57
CPNE1-201ENST00000317677 MRPL37Q9BZE1 423 aaKnown RBP11.47□□□□□ -0.57
CPNE1-201ENST00000317677 METTL9Q9H1A3 318 aa11.47□□□□□ -0.57
CPNE1-201ENST00000317677 CACFD1Q9UGQ2 172 aa11.47□□□□□ -0.57
CPNE1-201ENST00000317677 AK6Q9Y3D8 172 aaKnown RBP11.47□□□□□ -0.57
CPNE1-201ENST00000317677 HSPB2A8KAH6 182 aa11.46□□□□□ -0.58
CPNE1-201ENST00000317677 MKRN2OSH3BPM6 223 aa11.46□□□□□ -0.58
CPNE1-201ENST00000317677 H3BSH0 61 aa11.46□□□□□ -0.58
CPNE1-201ENST00000317677 SMAD9O15198 467 aaKnown RBP11.46□□□□□ -0.58
CPNE1-201ENST00000317677 IGHG1P01857 330 aa11.46□□□□□ -0.58
CPNE1-201ENST00000317677 ITGB2P05107 769 aa11.46□□□□□ -0.58
CPNE1-201ENST00000317677 CPT2P23786 658 aa11.46□□□□□ -0.58
CPNE1-201ENST00000317677 CDAP32320 146 aa11.46□□□□□ -0.58
CPNE1-201ENST00000317677 CLDN17P56750 224 aa11.46□□□□□ -0.58
CPNE1-201ENST00000317677 CLRN1P58418 232 aa11.46□□□□□ -0.58
CPNE1-201ENST00000317677 AIMP2Q13155 320 aaKnown RBP11.46□□□□□ -0.58
CPNE1-201ENST00000317677 RBM39Q14498 530 aaKnown RBP11.46□□□□□ -0.58
CPNE1-201ENST00000317677 HSPB2Q16082 182 aa11.46□□□□□ -0.58
CPNE1-201ENST00000317677 ODF4Q2M2E3 257 aa11.46□□□□□ -0.58
CPNE1-201ENST00000317677 THEM4Q5T1C6 240 aa11.46□□□□□ -0.58
CPNE1-201ENST00000317677 ABHD17BQ5VST6 288 aa11.46□□□□□ -0.58
CPNE1-201ENST00000317677 DCXRQ7Z4W1 244 aa11.46□□□□□ -0.58
CPNE1-201ENST00000317677 BAP18Q8IXM2 172 aa11.46□□□□□ -0.58
CPNE1-201ENST00000317677 ZIC4Q8N9L1 334 aa11.46□□□□□ -0.58
CPNE1-201ENST00000317677 OR2M7Q8NG81 312 aa11.46□□□□□ -0.58
CPNE1-201ENST00000317677 OR10S1Q8NGN2 331 aa11.46□□□□□ -0.58
CPNE1-201ENST00000317677 NUDCD2Q8WVJ2 157 aa11.46□□□□□ -0.58
CPNE1-201ENST00000317677 RAB24Q969Q5 203 aa11.46□□□□□ -0.58
CPNE1-201ENST00000317677 MCHR2Q969V1 340 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms