RNA–Protein interactions for RNA: ENST00000317243.9

ZNF554-201, Transcript of zinc finger protein 554, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF554, Length 2,736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-201ENST00000317243 KIAA0141Q14154 515 aaPredicted RBP17.08■□□□□ 0.33
ZNF554-201ENST00000317243 C1orf100Q5SVJ3 147 aa17.08■□□□□ 0.33
ZNF554-201ENST00000317243 ZNF101Q8IZC7 436 aa17.08■□□□□ 0.33
ZNF554-201ENST00000317243 ZNF565Q8N9K5 539 aa17.08■□□□□ 0.33
ZNF554-201ENST00000317243 OR13C9Q8NGT0 318 aa17.08■□□□□ 0.33
ZNF554-201ENST00000317243 OR4K15Q8NH41 348 aa17.08■□□□□ 0.33
ZNF554-201ENST00000317243 TGIF2Q9GZN2 237 aa17.08■□□□□ 0.33
ZNF554-201ENST00000317243 PARP11Q9NR21 331 aa17.08■□□□□ 0.33
ZNF554-201ENST00000317243 RARRES3Q9UL19 164 aa17.08■□□□□ 0.33
ZNF554-201ENST00000317243 IGLV3-12A0A075B6K2 115 aa17.08■□□□□ 0.32
ZNF554-201ENST00000317243 CXorf65A6NEN9 183 aa17.08■□□□□ 0.32
ZNF554-201ENST00000317243 ANKUB1A6NFN9 424 aa17.08■□□□□ 0.32
ZNF554-201ENST00000317243 VSIG8P0DPA2 414 aa17.08■□□□□ 0.32
ZNF554-201ENST00000317243 HSF1Q00613 529 aa17.08■□□□□ 0.32
ZNF554-201ENST00000317243 RSPO4Q2I0M5 234 aaPredicted RBP17.08■□□□□ 0.32
ZNF554-201ENST00000317243 ZNF385CQ66K41 422 aaPredicted RBP17.08■□□□□ 0.32
ZNF554-201ENST00000317243 OR2A2Q6IF42 318 aa17.08■□□□□ 0.32
ZNF554-201ENST00000317243 METTL8Q9H825 291 aaKnown RBP17.08■□□□□ 0.32
ZNF554-201ENST00000317243 SRPK3Q9UPE1 567 aa17.08■□□□□ 0.32
ZNF554-201ENST00000317243 NCOA6Q14686 2063 aaPredicted RBP17.07■□□□□ 0.32
ZNF554-201ENST00000317243 SLC2A1P11166 492 aa17.07■□□□□ 0.32
ZNF554-201ENST00000317243 C17orf67Q0P5P2 114 aa17.07■□□□□ 0.32
ZNF554-201ENST00000317243 MYBPHQ13203 477 aa17.07■□□□□ 0.32
ZNF554-201ENST00000317243 NSUN5P2Q63ZY6 315 aa17.07■□□□□ 0.32
ZNF554-201ENST00000317243 CLEC18BQ6UXF7 455 aa17.07■□□□□ 0.32
ZNF554-201ENST00000317243 KMT5CQ86Y97 462 aa17.07■□□□□ 0.32
ZNF554-201ENST00000317243 CD300LFQ8TDQ1 290 aa17.07■□□□□ 0.32
ZNF554-201ENST00000317243 CDX2Q99626 313 aaPredicted RBP17.07■□□□□ 0.32
ZNF554-201ENST00000317243 SMIM3Q9BZL3 60 aa17.07■□□□□ 0.32
ZNF554-201ENST00000317243 EIF5A2Q9GZV4 153 aaKnown RBP17.07■□□□□ 0.32
ZNF554-201ENST00000317243 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.07■□□□□ 0.32
ZNF554-201ENST00000317243 H7C1Q1 480 aa17.07■□□□□ 0.32
ZNF554-201ENST00000317243 TSPAN15O95858 294 aa17.07■□□□□ 0.32
ZNF554-201ENST00000317243 HOXB5P09067 269 aa17.07■□□□□ 0.32
ZNF554-201ENST00000317243 H2BFMP0C1H6 154 aa17.07■□□□□ 0.32
ZNF554-201ENST00000317243 NDUFB7P17568 137 aa17.07■□□□□ 0.32
ZNF554-201ENST00000317243 HOXA5P20719 270 aa17.07■□□□□ 0.32
ZNF554-201ENST00000317243 NDUFA6P56556 154 aa17.07■□□□□ 0.32
ZNF554-201ENST00000317243 NUP54Q7Z3B4 507 aa17.07■□□□□ 0.32
ZNF554-201ENST00000317243 CPEB2Q7Z5Q1 589 aaKnown RBP17.07■□□□□ 0.32
ZNF554-201ENST00000317243 ST7LQ8TDW4 575 aa17.07■□□□□ 0.32
ZNF554-201ENST00000317243 S100PBPQ96BU1 408 aa17.07■□□□□ 0.32
ZNF554-201ENST00000317243 ADAT3Q96EY9 351 aaPredicted RBP17.07■□□□□ 0.32
ZNF554-201ENST00000317243 OPA3Q9H6K4 179 aa17.07■□□□□ 0.32
ZNF554-201ENST00000317243 METTL7AQ9H8H3 244 aa17.07■□□□□ 0.32
ZNF554-201ENST00000317243 PPP4R1LQ9P1A2 415 aa17.07■□□□□ 0.32
ZNF554-201ENST00000317243 B3GAT1Q9P2W7 334 aa17.07■□□□□ 0.32
ZNF554-201ENST00000317243 MYOTQ9UBF9 498 aa17.07■□□□□ 0.32
ZNF554-201ENST00000317243 SLC5A6Q9Y289 635 aa17.07■□□□□ 0.32
ZNF554-201ENST00000317243 NME2P1O60361 137 aa17.06■□□□□ 0.32
ZNF554-201ENST00000317243 SRSF10O75494 262 aaKnown RBP17.06■□□□□ 0.32
ZNF554-201ENST00000317243 IFNA17P01571 189 aa17.06■□□□□ 0.32
ZNF554-201ENST00000317243 CCL4P13236 92 aa17.06■□□□□ 0.32
ZNF554-201ENST00000317243 S100A2P29034 98 aa17.06■□□□□ 0.32
ZNF554-201ENST00000317243 RPS10P46783 165 aaKnown RBP17.06■□□□□ 0.32
ZNF554-201ENST00000317243 HMGN3Q15651 99 aa17.06■□□□□ 0.32
ZNF554-201ENST00000317243 ZNF239Q16600 458 aaKnown RBP17.06■□□□□ 0.32
ZNF554-201ENST00000317243 TMEM128Q5BJH2 165 aa17.06■□□□□ 0.32
ZNF554-201ENST00000317243 H1FNTQ75WM6 255 aaPredicted RBP17.06■□□□□ 0.32
ZNF554-201ENST00000317243 RABEPKQ7Z6M1 372 aa17.06■□□□□ 0.32
ZNF554-201ENST00000317243 CARFQ8N187 725 aa17.06■□□□□ 0.32
ZNF554-201ENST00000317243 NKAIN3Q8N8D7 197 aa17.06■□□□□ 0.32
ZNF554-201ENST00000317243 SEMA6DQ8NFY4 1073 aa17.06■□□□□ 0.32
ZNF554-201ENST00000317243 KCNK17Q96T54 332 aa17.06■□□□□ 0.32
ZNF554-201ENST00000317243 AHCTF1Q8WYP5 2266 aa17.06■□□□□ 0.32
ZNF554-201ENST00000317243 LOC390937A0A1W2PQ73 354 aa17.06■□□□□ 0.32
ZNF554-201ENST00000317243 LPAL2Q16609 132 aa17.06■□□□□ 0.32
ZNF554-201ENST00000317243 ANKRD55Q3KP44 614 aa17.06■□□□□ 0.32
ZNF554-201ENST00000317243 MIDNQ504T8 468 aa17.06■□□□□ 0.32
ZNF554-201ENST00000317243 ACTBL2Q562R1 376 aa17.06■□□□□ 0.32
ZNF554-201ENST00000317243 UNQ6494/PRO21346Q6UXR6 183 aa17.06■□□□□ 0.32
ZNF554-201ENST00000317243 ANGPTL5Q86XS5 388 aa17.06■□□□□ 0.32
ZNF554-201ENST00000317243 TMEM230Q96A57 120 aa17.06■□□□□ 0.32
ZNF554-201ENST00000317243 PRDM13Q9H4Q3 707 aa17.06■□□□□ 0.32
ZNF554-201ENST00000317243 C5orf66Q9H5L9 145 aa17.06■□□□□ 0.32
ZNF554-201ENST00000317243 SDHAF3Q9NRP4 125 aa17.06■□□□□ 0.32
ZNF554-201ENST00000317243 COLQQ9Y215 455 aaPredicted RBP17.06■□□□□ 0.32
ZNF554-201ENST00000317243 UMAD1C9J7I0 102 aa17.05■□□□□ 0.32
ZNF554-201ENST00000317243 MPZP25189 248 aa17.05■□□□□ 0.32
ZNF554-201ENST00000317243 CRABP1P29762 137 aa17.05■□□□□ 0.32
ZNF554-201ENST00000317243 ACY1Q03154 408 aa17.05■□□□□ 0.32
ZNF554-201ENST00000317243 ZNF248Q8NDW4 579 aa17.05■□□□□ 0.32
ZNF554-201ENST00000317243 OIT3Q8WWZ8 545 aa17.05■□□□□ 0.32
ZNF554-201ENST00000317243 CHST5Q9GZS9 411 aa17.05■□□□□ 0.32
ZNF554-201ENST00000317243 SERINC1Q9NRX5 453 aa17.05■□□□□ 0.32
ZNF554-201ENST00000317243 RHBDD3Q9Y3P4 386 aa17.05■□□□□ 0.32
ZNF554-201ENST00000317243 LIPT2A6NK58 231 aa17.05■□□□□ 0.32
ZNF554-201ENST00000317243 SYT7O43581 403 aa17.05■□□□□ 0.32
ZNF554-201ENST00000317243 ZNF616Q08AN1 781 aa17.05■□□□□ 0.32
ZNF554-201ENST00000317243 GUK1Q16774 197 aa17.05■□□□□ 0.32
ZNF554-201ENST00000317243 HOGA1Q86XE5 327 aa17.05■□□□□ 0.32
ZNF554-201ENST00000317243 LYPD6Q86Y78 171 aa17.05■□□□□ 0.32
ZNF554-201ENST00000317243 OR56B1Q8NGI3 324 aa17.05■□□□□ 0.32
ZNF554-201ENST00000317243 OR10S1Q8NGN2 331 aa17.05■□□□□ 0.32
ZNF554-201ENST00000317243 TMEM234Q8WY98 164 aa17.05■□□□□ 0.32
ZNF554-201ENST00000317243 PTX4Q96A99 478 aa17.05■□□□□ 0.32
ZNF554-201ENST00000317243 MALSU1Q96EH3 234 aa17.05■□□□□ 0.32
ZNF554-201ENST00000317243 POMT1Q9Y6A1 747 aa17.05■□□□□ 0.32
ZNF554-201ENST00000317243 SPENQ96T58 3664 aaKnown RBP17.05■□□□□ 0.32
ZNF554-201ENST00000317243 LYL1P12980 280 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms