RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 TUBA4BQ9H853 241 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 DNAJB12Q9NXW2 375 aaKnown RBP7.92□□□□□ -1.14
COL6A5-202ENST00000312481 ICAM5Q9UMF0 924 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 PKDREJQ9NTG1 2253 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 ZNF705GA8MUZ8 300 aaPredicted RBP7.92□□□□□ -1.14
COL6A5-202ENST00000312481 LEUTXA8MZ59 168 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 ZP4Q12836 540 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 WDR89Q96FK6 387 aaPredicted RBP7.92□□□□□ -1.14
COL6A5-202ENST00000312481 SGIP1Q9BQI5 828 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 RNF186Q9NXI6 227 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 PDCD6O75340 191 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 PITX3O75364 302 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 SLC2A1P11166 492 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 NDUFB7P17568 137 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 CD80P33681 288 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 NTHL1P78549 312 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 NSUN5P2Q63ZY6 315 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 BHLHA9Q7RTU4 235 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 GPR32P1Q8NGA4 272 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 WSB1Q9Y6I7 421 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 GYPBP06028 91 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 BTF3P20290 206 aaKnown RBP7.91□□□□□ -1.14
COL6A5-202ENST00000312481 HOXA6P31267 233 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 BBS1Q8NFJ9 593 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 C16orf52Q8NHV5 167 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 TMEM56Q96MV1 263 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 GPR84Q9NQS5 396 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 FGF21Q9NSA1 209 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 H3BML4 177 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 ST6GAL1P15907 406 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 PTGFRP43088 359 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 PAFAH1B2P68402 229 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 ZXDBP98169 803 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 ZIC1Q15915 447 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 PWWP2BQ6NUJ5 590 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 ERASQ7Z444 233 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 FBXO34Q9NWN3 711 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 MIOXQ9UGB7 285 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 OR52A4PA6NMU1 304 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 MEIS3P2A8K0S8 358 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 TMPRSS11DO60235 418 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 GUK1Q16774 197 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 C11orf40Q8WZ69 217 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 HSD17B10Q99714 261 aaKnown RBP7.91□□□□□ -1.14
COL6A5-202ENST00000312481 VAMP8Q9BV40 100 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 GABRA6Q16445 453 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 TMPRSS7Q7RTY8 843 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 PLPP7Q8NBV4 271 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 OR8D4Q8NGM9 314 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 PFN4Q8NHR9 129 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 SLC37A2Q8TED4 501 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 VCX2Q9H322 139 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 PLAC1Q9HBJ0 212 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 ZNF225Q9UK10 706 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 HCFC2Q9Y5Z7 792 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 EML6Q6ZMW3 1958 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 TMEM210A6NLX4 147 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 EPHA2P29317 976 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 PIGTQ969N2 578 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 PTDSS2Q9BVG9 487 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 HEYLQ9NQ87 328 aaPredicted RBP7.91□□□□□ -1.14
COL6A5-202ENST00000312481 PRDM7Q9NQW5 492 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 TAS2R4Q9NYW5 299 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 SELENOFO60613 162 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 F13BP05160 661 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 SLC25A6P12236 298 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 GZMMP51124 257 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 LINC00303Q3SY05 128 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 ZNF770Q6IQ21 691 aaPredicted RBP7.91□□□□□ -1.14
COL6A5-202ENST00000312481 TSEN54Q7Z6J9 526 aaKnown RBP7.91□□□□□ -1.14
COL6A5-202ENST00000312481 OR1L4Q8NGR5 311 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 OR2A1Q8NGT9 310 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 ST7LQ8TDW4 575 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 POM121L2Q96KW2 1035 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 AQP10Q96PS8 301 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 GP6Q9HCN6 339 aa7.91□□□□□ -1.14
COL6A5-202ENST00000312481 YBX2Q9Y2T7 364 aaKnown RBP7.91□□□□□ -1.14
COL6A5-202ENST00000312481 RRP8O43159 456 aaKnown RBP7.9□□□□□ -1.14
COL6A5-202ENST00000312481 HPP00738 406 aa7.9□□□□□ -1.14
COL6A5-202ENST00000312481 MPZP25189 248 aa7.9□□□□□ -1.14
COL6A5-202ENST00000312481 UBE2G1P62253 170 aa7.9□□□□□ -1.14
COL6A5-202ENST00000312481 ADIRFQ15847 76 aa7.9□□□□□ -1.14
COL6A5-202ENST00000312481 TMEM241Q24JQ0 296 aa7.9□□□□□ -1.14
COL6A5-202ENST00000312481 SSX7Q7RTT5 188 aa7.9□□□□□ -1.14
COL6A5-202ENST00000312481 WFIKKN1Q96NZ8 548 aa7.9□□□□□ -1.14
COL6A5-202ENST00000312481 CHST5Q9GZS9 411 aa7.9□□□□□ -1.14
COL6A5-202ENST00000312481 MRPL15Q9P015 296 aaKnown RBP7.9□□□□□ -1.14
COL6A5-202ENST00000312481 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.9□□□□□ -1.14
COL6A5-202ENST00000312481 PYCARD-AS1I3L0S3 204 aa7.9□□□□□ -1.14
COL6A5-202ENST00000312481 FRS3O43559 492 aa7.9□□□□□ -1.14
COL6A5-202ENST00000312481 CD3DP04234 171 aa7.9□□□□□ -1.14
COL6A5-202ENST00000312481 CST2P09228 141 aa7.9□□□□□ -1.14
COL6A5-202ENST00000312481 CSF2RBP32927 897 aa7.9□□□□□ -1.14
COL6A5-202ENST00000312481 OR1F12Q8NHA8 337 aa7.9□□□□□ -1.14
COL6A5-202ENST00000312481 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.9□□□□□ -1.14
COL6A5-202ENST00000312481 MAGT1Q9H0U3 335 aa7.9□□□□□ -1.14
COL6A5-202ENST00000312481 GCM1Q9NP62 436 aa7.9□□□□□ -1.14
COL6A5-202ENST00000312481 MMP24Q9Y5R2 645 aa7.9□□□□□ -1.14
COL6A5-202ENST00000312481 A0A1W2PN81 502 aa7.9□□□□□ -1.14
COL6A5-202ENST00000312481 LOC390937A0A1W2PQ73 354 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms