RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 LIFP15018 202 aa22.14■■□□□ 1.14
HOXB3-201ENST00000311626 THBS4P35443 961 aa22.14■■□□□ 1.14
HOXB3-201ENST00000311626 CDCP2Q5VXM1 449 aa22.14■■□□□ 1.14
HOXB3-201ENST00000311626 OR2A2Q6IF42 318 aa22.14■■□□□ 1.14
HOXB3-201ENST00000311626 TMEM123Q8N131 208 aa22.14■■□□□ 1.14
HOXB3-201ENST00000311626 TMEM156Q8N614 296 aa22.14■■□□□ 1.14
HOXB3-201ENST00000311626 SEMA6DQ8NFY4 1073 aa22.14■■□□□ 1.14
HOXB3-201ENST00000311626 OR4A4PQ8NGN8 299 aa22.14■■□□□ 1.14
HOXB3-201ENST00000311626 STOML3Q8TAV4 291 aa22.14■■□□□ 1.14
HOXB3-201ENST00000311626 NECAB3Q96P71 396 aaPredicted RBP22.14■■□□□ 1.14
HOXB3-201ENST00000311626 SLC6A15Q9H2J7 730 aa22.14■■□□□ 1.14
HOXB3-201ENST00000311626 TREM1Q9NP99 234 aa22.14■■□□□ 1.14
HOXB3-201ENST00000311626 WNT16Q9UBV4 365 aa22.14■■□□□ 1.14
HOXB3-201ENST00000311626 A0A0G2JMM0 328 aa22.14■■□□□ 1.13
HOXB3-201ENST00000311626 A0A1W2PPB8 328 aa22.14■■□□□ 1.13
HOXB3-201ENST00000311626 A0A1W2PRS3 328 aa22.14■■□□□ 1.13
HOXB3-201ENST00000311626 CEACAM18A8MTB9 384 aa22.14■■□□□ 1.13
HOXB3-201ENST00000311626 KIR3DP1A8MWS1 328 aa22.14■■□□□ 1.13
HOXB3-201ENST00000311626 CFIP05156 583 aa22.14■■□□□ 1.13
HOXB3-201ENST00000311626 MTCP1P56278 107 aa22.14■■□□□ 1.13
HOXB3-201ENST00000311626 RPL7L1Q6DKI1 246 aaKnown RBP22.14■■□□□ 1.13
HOXB3-201ENST00000311626 YRDCQ86U90 279 aaKnown RBP22.14■■□□□ 1.13
HOXB3-201ENST00000311626 CBLN2Q8IUK8 224 aa22.14■■□□□ 1.13
HOXB3-201ENST00000311626 CCDC36Q8IYA8 594 aa22.14■■□□□ 1.13
HOXB3-201ENST00000311626 POC1AQ8NBT0 407 aa22.14■■□□□ 1.13
HOXB3-201ENST00000311626 FAM157CP0CG43 387 aa22.13■■□□□ 1.13
HOXB3-201ENST00000311626 C2orf50Q96LR7 162 aa22.13■■□□□ 1.13
HOXB3-201ENST00000311626 CHST5Q9GZS9 411 aa22.13■■□□□ 1.13
HOXB3-201ENST00000311626 LIME1Q9H400 295 aa22.13■■□□□ 1.13
HOXB3-201ENST00000311626 COX6A1P12074 109 aa22.13■■□□□ 1.13
HOXB3-201ENST00000311626 CBX5P45973 191 aa22.13■■□□□ 1.13
HOXB3-201ENST00000311626 TAS2R46P59540 309 aa22.13■■□□□ 1.13
HOXB3-201ENST00000311626 ZNF239Q16600 458 aaKnown RBP22.13■■□□□ 1.13
HOXB3-201ENST00000311626 ZNF774Q6NX45 483 aa22.13■■□□□ 1.13
HOXB3-201ENST00000311626 LDLRAD3Q86YD5 345 aa22.13■■□□□ 1.13
HOXB3-201ENST00000311626 HAS2Q92819 552 aa22.13■■□□□ 1.13
HOXB3-201ENST00000311626 SMIM3Q9BZL3 60 aa22.13■■□□□ 1.13
HOXB3-201ENST00000311626 HS3ST3B1Q9Y662 390 aa22.13■■□□□ 1.13
HOXB3-201ENST00000311626 LOC102725191A0A1B0GVB3 256 aa22.12■■□□□ 1.13
HOXB3-201ENST00000311626 F8W036 122 aa22.12■■□□□ 1.13
HOXB3-201ENST00000311626 CD79AP11912 226 aa22.12■■□□□ 1.13
HOXB3-201ENST00000311626 CTSSP25774 331 aa22.12■■□□□ 1.13
HOXB3-201ENST00000311626 ID4P47928 161 aa22.12■■□□□ 1.13
HOXB3-201ENST00000311626 BLOC1S1P78537 153 aa22.12■■□□□ 1.13
HOXB3-201ENST00000311626 MST1LQ2TV78 715 aa22.12■■□□□ 1.13
HOXB3-201ENST00000311626 SP6Q3SY56 376 aa22.12■■□□□ 1.13
HOXB3-201ENST00000311626 AKR7LQ8NHP1 331 aa22.12■■□□□ 1.13
HOXB3-201ENST00000311626 TLNRD1Q9H1K6 362 aa22.12■■□□□ 1.13
HOXB3-201ENST00000311626 PATE3B3GLJ2 98 aa22.12■■□□□ 1.13
HOXB3-201ENST00000311626 AGPAT2O15120 278 aa22.12■■□□□ 1.13
HOXB3-201ENST00000311626 F10P00742 488 aa22.12■■□□□ 1.13
HOXB3-201ENST00000311626 C10orf128Q5T292 105 aa22.12■■□□□ 1.13
HOXB3-201ENST00000311626 CLRN3Q8NCR9 226 aa22.12■■□□□ 1.13
HOXB3-201ENST00000311626 RNF141Q8WVD5 230 aa22.12■■□□□ 1.13
HOXB3-201ENST00000311626 TOMM40LQ969M1 308 aa22.11■■□□□ 1.13
HOXB3-201ENST00000311626 IMMP1LQ96LU5 166 aa22.11■■□□□ 1.13
HOXB3-201ENST00000311626 PARP12Q9H0J9 701 aaKnown RBP22.11■■□□□ 1.13
HOXB3-201ENST00000311626 TNRC18O15417 2968 aaPredicted RBP22.11■■□□□ 1.13
HOXB3-201ENST00000311626 IGKV1-27A0A075B6S5 117 aa22.11■■□□□ 1.13
HOXB3-201ENST00000311626 A0A0U1RQV5 110 aa22.11■■□□□ 1.13
HOXB3-201ENST00000311626 CSTBP04080 98 aaKnown RBP22.11■■□□□ 1.13
HOXB3-201ENST00000311626 NME2P22392 152 aa22.11■■□□□ 1.13
HOXB3-201ENST00000311626 RBM39Q14498 530 aaKnown RBP22.11■■□□□ 1.13
HOXB3-201ENST00000311626 IAH1Q2TAA2 248 aaPredicted RBP22.11■■□□□ 1.13
HOXB3-201ENST00000311626 SCGB3A2Q96PL1 93 aa22.11■■□□□ 1.13
HOXB3-201ENST00000311626 TMEM100Q9NV29 134 aa22.11■■□□□ 1.13
HOXB3-201ENST00000311626 C14orf166Q9Y224 244 aaKnown RBP22.11■■□□□ 1.13
HOXB3-201ENST00000311626 SIT1Q9Y3P8 196 aa22.11■■□□□ 1.13
HOXB3-201ENST00000311626 CCDC85CA6NKD9 419 aa22.1■■□□□ 1.13
HOXB3-201ENST00000311626 FIGNL2A6NMB9 653 aa22.1■■□□□ 1.13
HOXB3-201ENST00000311626 LRP3O75074 770 aa22.1■■□□□ 1.13
HOXB3-201ENST00000311626 FBXO24O75426 580 aa22.1■■□□□ 1.13
HOXB3-201ENST00000311626 KLF7O75840 302 aaPredicted RBP22.1■■□□□ 1.13
HOXB3-201ENST00000311626 CPT2P23786 658 aa22.1■■□□□ 1.13
HOXB3-201ENST00000311626 OPN5Q6U736 354 aa22.1■■□□□ 1.13
HOXB3-201ENST00000311626 AIFM2Q9BRQ8 373 aa22.1■■□□□ 1.13
HOXB3-201ENST00000311626 SLC5A7Q9GZV3 580 aa22.1■■□□□ 1.13
HOXB3-201ENST00000311626 RAB19A4D1S5 217 aa22.1■■□□□ 1.13
HOXB3-201ENST00000311626 SCGB1D2O95969 90 aa22.1■■□□□ 1.13
HOXB3-201ENST00000311626 SSR4P51571 173 aa22.1■■□□□ 1.13
HOXB3-201ENST00000311626 SPEM2Q0P670 501 aa22.1■■□□□ 1.13
HOXB3-201ENST00000311626 ARL11Q969Q4 196 aa22.1■■□□□ 1.13
HOXB3-201ENST00000311626 ALKBH3Q96Q83 286 aaPredicted RBP22.1■■□□□ 1.13
HOXB3-201ENST00000311626 ANGPTL4Q9BY76 406 aa22.1■■□□□ 1.13
HOXB3-201ENST00000311626 PCDHGA1Q9Y5H4 931 aa22.1■■□□□ 1.13
HOXB3-201ENST00000311626 CCDC187A0A096LP49 1063 aa22.1■■□□□ 1.13
HOXB3-201ENST00000311626 ONECUT2O95948 504 aa22.1■■□□□ 1.13
HOXB3-201ENST00000311626 DSCR4P56555 118 aaPredicted RBP22.1■■□□□ 1.13
HOXB3-201ENST00000311626 RPS18P62269 152 aaKnown RBP22.1■■□□□ 1.13
HOXB3-201ENST00000311626 TSPO2Q5TGU0 170 aa22.1■■□□□ 1.13
HOXB3-201ENST00000311626 EMG1Q92979 244 aaKnown RBP22.1■■□□□ 1.13
HOXB3-201ENST00000311626 MRPL24Q96A35 216 aaKnown RBP22.1■■□□□ 1.13
HOXB3-201ENST00000311626 CRLF2Q9HC73 371 aa22.1■■□□□ 1.13
HOXB3-201ENST00000311626 PCDHB16Q9NRJ7 776 aa22.1■■□□□ 1.13
HOXB3-201ENST00000311626 ZNF629Q9UEG4 869 aaPredicted RBP22.1■■□□□ 1.13
HOXB3-201ENST00000311626 IFNA2P01563 188 aa22.09■■□□□ 1.13
HOXB3-201ENST00000311626 B4GALT1P15291 398 aa22.09■■□□□ 1.13
HOXB3-201ENST00000311626 RBMXP38159 391 aaKnown RBP22.09■■□□□ 1.13
HOXB3-201ENST00000311626 RPUSD3Q6P087 351 aaKnown RBP22.09■■□□□ 1.13
HOXB3-201ENST00000311626 MAML2Q8IZL2 1156 aaPredicted RBP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms