RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 GPN1Q9HCN4 374 aaPredicted RBP18.35■□□□□ 0.53
ATG4D-201ENST00000309469 DKK4Q9UBT3 224 aa18.35■□□□□ 0.53
ATG4D-201ENST00000309469 LHX6Q9UPM6 363 aa18.35■□□□□ 0.53
ATG4D-201ENST00000309469 FABP7O15540 132 aa18.35■□□□□ 0.53
ATG4D-201ENST00000309469 LYZL6O75951 148 aa18.35■□□□□ 0.53
ATG4D-201ENST00000309469 HTR3BO95264 441 aa18.35■□□□□ 0.53
ATG4D-201ENST00000309469 CSTBP04080 98 aaKnown RBP18.35■□□□□ 0.53
ATG4D-201ENST00000309469 RLN1P04808 185 aa18.35■□□□□ 0.53
ATG4D-201ENST00000309469 UBE2NP61088 152 aaKnown RBP18.35■□□□□ 0.53
ATG4D-201ENST00000309469 GABRA6Q16445 453 aa18.35■□□□□ 0.53
ATG4D-201ENST00000309469 PLEKHN1Q494U1 663 aaPredicted RBP18.35■□□□□ 0.53
ATG4D-201ENST00000309469 RNASE10Q5GAN6 216 aaKnown RBP18.35■□□□□ 0.53
ATG4D-201ENST00000309469 VWA1Q6PCB0 445 aa18.35■□□□□ 0.53
ATG4D-201ENST00000309469 SLC36A1Q7Z2H8 476 aa18.35■□□□□ 0.53
ATG4D-201ENST00000309469 ZFAND1Q8TCF1 268 aa18.35■□□□□ 0.53
ATG4D-201ENST00000309469 WBP1Q96G27 269 aa18.35■□□□□ 0.53
ATG4D-201ENST00000309469 Q96M66 194 aa18.35■□□□□ 0.53
ATG4D-201ENST00000309469 SLC6A7Q99884 636 aa18.35■□□□□ 0.53
ATG4D-201ENST00000309469 SLC25A21Q9BQT8 299 aaPredicted RBP18.35■□□□□ 0.53
ATG4D-201ENST00000309469 POFUT1Q9H488 388 aa18.35■□□□□ 0.53
ATG4D-201ENST00000309469 GPR160Q9UJ42 338 aa18.35■□□□□ 0.53
ATG4D-201ENST00000309469 SCP2D1Q9UJQ7 156 aa18.35■□□□□ 0.53
ATG4D-201ENST00000309469 ANAPC10Q9UM13 185 aa18.35■□□□□ 0.53
ATG4D-201ENST00000309469 DISC1C4P0D8 188 aa18.34■□□□□ 0.53
ATG4D-201ENST00000309469 MKRN2OSH3BPM6 223 aa18.34■□□□□ 0.53
ATG4D-201ENST00000309469 ZNF780AO75290 641 aaPredicted RBP18.34■□□□□ 0.53
ATG4D-201ENST00000309469 FOXF2Q12947 444 aa18.34■□□□□ 0.53
ATG4D-201ENST00000309469 PDZK1IP1Q13113 114 aa18.34■□□□□ 0.53
ATG4D-201ENST00000309469 CSNK2A3Q8NEV1 391 aa18.34■□□□□ 0.53
ATG4D-201ENST00000309469 CYYR1Q96J86 154 aa18.34■□□□□ 0.53
ATG4D-201ENST00000309469 HYLS1Q96M11 299 aa18.34■□□□□ 0.53
ATG4D-201ENST00000309469 TMEM246Q9BRR3 403 aa18.34■□□□□ 0.53
ATG4D-201ENST00000309469 PAPOLGQ9BWT3 736 aaKnown RBP18.34■□□□□ 0.53
ATG4D-201ENST00000309469 PECRQ9BY49 303 aa18.34■□□□□ 0.53
ATG4D-201ENST00000309469 MEIKINA0A087WXM9 373 aa18.33■□□□□ 0.53
ATG4D-201ENST00000309469 SNRPGP15A8MWD9 76 aa18.33■□□□□ 0.53
ATG4D-201ENST00000309469 CST4P01036 141 aa18.33■□□□□ 0.53
ATG4D-201ENST00000309469 VSIG10L2P0DP72 767 aa18.33■□□□□ 0.53
ATG4D-201ENST00000309469 ZNF14P17017 642 aaPredicted RBP18.33■□□□□ 0.53
ATG4D-201ENST00000309469 ARFRP1Q13795 201 aa18.33■□□□□ 0.53
ATG4D-201ENST00000309469 ARL6IP1Q15041 203 aa18.33■□□□□ 0.53
ATG4D-201ENST00000309469 NKPD1Q17RQ9 610 aa18.33■□□□□ 0.53
ATG4D-201ENST00000309469 CD163Q86VB7 1156 aa18.33■□□□□ 0.53
ATG4D-201ENST00000309469 PXT1Q8NFP0 134 aa18.33■□□□□ 0.53
ATG4D-201ENST00000309469 OCSTAMPQ9BR26 566 aa18.33■□□□□ 0.53
ATG4D-201ENST00000309469 PLEKHA6Q9Y2H5 1048 aa18.33■□□□□ 0.53
ATG4D-201ENST00000309469 IGKV1-12A0A0C4DH73 117 aa18.33■□□□□ 0.52
ATG4D-201ENST00000309469 GFRA3O60609 400 aa18.33■□□□□ 0.52
ATG4D-201ENST00000309469 IGKV1D-12P01611 117 aa18.33■□□□□ 0.52
ATG4D-201ENST00000309469 CRYABP02511 175 aaKnown RBP18.33■□□□□ 0.52
ATG4D-201ENST00000309469 CSN2P05814 226 aa18.33■□□□□ 0.52
ATG4D-201ENST00000309469 NAT1P18440 290 aa18.33■□□□□ 0.52
ATG4D-201ENST00000309469 TBPP20226 339 aa18.33■□□□□ 0.52
ATG4D-201ENST00000309469 MPZP25189 248 aa18.33■□□□□ 0.52
ATG4D-201ENST00000309469 PRDX4Q13162 271 aa18.33■□□□□ 0.52
ATG4D-201ENST00000309469 TBC1D28Q2M2D7 210 aa18.33■□□□□ 0.52
ATG4D-201ENST00000309469 ASCC1Q8N9N2 400 aaKnown RBP18.33■□□□□ 0.52
ATG4D-201ENST00000309469 OR5L1Q8NGL2 311 aa18.33■□□□□ 0.52
ATG4D-201ENST00000309469 ST8SIA4Q92187 359 aa18.33■□□□□ 0.52
ATG4D-201ENST00000309469 PLSCR4Q9NRQ2 329 aa18.33■□□□□ 0.52
ATG4D-201ENST00000309469 SLC2A8Q9NY64 477 aa18.33■□□□□ 0.52
ATG4D-201ENST00000309469 EIF3KQ9UBQ5 218 aaKnown RBP18.33■□□□□ 0.52
ATG4D-201ENST00000309469 A0A1W2PR80 420 aa18.32■□□□□ 0.52
ATG4D-201ENST00000309469 CREBL2O60519 120 aaPredicted RBP18.32■□□□□ 0.52
ATG4D-201ENST00000309469 HOXB1P14653 301 aaPredicted RBP18.32■□□□□ 0.52
ATG4D-201ENST00000309469 GABRR1P24046 479 aa18.32■□□□□ 0.52
ATG4D-201ENST00000309469 CBX5P45973 191 aa18.32■□□□□ 0.52
ATG4D-201ENST00000309469 SCGB2B2Q4G0G5 96 aa18.32■□□□□ 0.52
ATG4D-201ENST00000309469 ZNF626Q68DY1 528 aa18.32■□□□□ 0.52
ATG4D-201ENST00000309469 MYO7BQ6PIF6 2116 aa18.32■□□□□ 0.52
ATG4D-201ENST00000309469 MED12LQ86YW9 2145 aa18.32■□□□□ 0.52
ATG4D-201ENST00000309469 SPACA3Q8IXA5 215 aa18.32■□□□□ 0.52
ATG4D-201ENST00000309469 FTMTQ8N4E7 242 aa18.32■□□□□ 0.52
ATG4D-201ENST00000309469 SNAPC3Q92966 411 aa18.32■□□□□ 0.52
ATG4D-201ENST00000309469 GPR137Q96N19 417 aa18.32■□□□□ 0.52
ATG4D-201ENST00000309469 PRRT1Q99946 306 aa18.32■□□□□ 0.52
ATG4D-201ENST00000309469 IL36GQ9NZH8 169 aa18.32■□□□□ 0.52
ATG4D-201ENST00000309469 CRIM1Q9NZV1 1036 aa18.32■□□□□ 0.52
ATG4D-201ENST00000309469 ZNF69Q9UC07 566 aa18.32■□□□□ 0.52
ATG4D-201ENST00000309469 CFAP47Q6ZTR5 3102 aa18.31■□□□□ 0.52
ATG4D-201ENST00000309469 CD300LBA8K4G0 201 aa18.31■□□□□ 0.52
ATG4D-201ENST00000309469 SERPINE3A8MV23 424 aa18.31■□□□□ 0.52
ATG4D-201ENST00000309469 COX5AP20674 150 aa18.31■□□□□ 0.52
ATG4D-201ENST00000309469 HRH1P35367 487 aa18.31■□□□□ 0.52
ATG4D-201ENST00000309469 CXADRP78310 365 aa18.31■□□□□ 0.52
ATG4D-201ENST00000309469 INO80CQ6PI98 192 aaPredicted RBP18.31■□□□□ 0.52
ATG4D-201ENST00000309469 RFPL4BQ6ZWI9 263 aa18.31■□□□□ 0.52
ATG4D-201ENST00000309469 OR4K15Q8NH41 348 aa18.31■□□□□ 0.52
ATG4D-201ENST00000309469 FBXW5Q969U6 566 aa18.31■□□□□ 0.52
ATG4D-201ENST00000309469 ALX4Q9H161 411 aaPredicted RBP18.31■□□□□ 0.52
ATG4D-201ENST00000309469 RANBP3Q9H6Z4 567 aaPredicted RBP18.31■□□□□ 0.52
ATG4D-201ENST00000309469 WASF3Q9UPY6 502 aa18.31■□□□□ 0.52
ATG4D-201ENST00000309469 FRYQ5TBA9 3013 aa18.31■□□□□ 0.52
ATG4D-201ENST00000309469 PQLC2LA1A4F0 135 aa18.31■□□□□ 0.52
ATG4D-201ENST00000309469 MBD3L4A6NDZ8 208 aaPredicted RBP18.31■□□□□ 0.52
ATG4D-201ENST00000309469 MBD3L3A6NE82 208 aaPredicted RBP18.31■□□□□ 0.52
ATG4D-201ENST00000309469 MBD3L5A6NJ08 208 aaPredicted RBP18.31■□□□□ 0.52
ATG4D-201ENST00000309469 TSC22D1Q15714 1073 aa18.31■□□□□ 0.52
ATG4D-201ENST00000309469 SEZ6L2Q6UXD5 910 aa18.31■□□□□ 0.52
ATG4D-201ENST00000309469 SEM1Q6ZVN7 128 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms