RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 TMEM128Q5BJH2 165 aa11.23□□□□□ -0.61
RETREG3-201ENST00000309428 EXD3Q8N9H8 876 aa11.23□□□□□ -0.61
RETREG3-201ENST00000309428 OR52N5Q8NH56 324 aa11.23□□□□□ -0.61
RETREG3-201ENST00000309428 ZNF721Q8TF20 911 aa11.23□□□□□ -0.61
RETREG3-201ENST00000309428 TMEM234Q8WY98 164 aa11.23□□□□□ -0.61
RETREG3-201ENST00000309428 NAA11Q9BSU3 229 aaPredicted RBP11.23□□□□□ -0.61
RETREG3-201ENST00000309428 GDF2Q9UK05 429 aaPredicted RBP11.23□□□□□ -0.61
RETREG3-201ENST00000309428 A0A1W2PPC1 479 aa11.23□□□□□ -0.61
RETREG3-201ENST00000309428 UPK3AO75631 287 aa11.23□□□□□ -0.61
RETREG3-201ENST00000309428 OR7C1O76099 320 aaPredicted RBP11.23□□□□□ -0.61
RETREG3-201ENST00000309428 LAP3P28838 519 aa11.23□□□□□ -0.61
RETREG3-201ENST00000309428 POLR2HP52434 150 aaKnown RBP11.23□□□□□ -0.61
RETREG3-201ENST00000309428 MPPED2Q15777 294 aa11.23□□□□□ -0.61
RETREG3-201ENST00000309428 TCEAL6Q6IPX3 200 aa11.23□□□□□ -0.61
RETREG3-201ENST00000309428 CLEC18BQ6UXF7 455 aa11.23□□□□□ -0.61
RETREG3-201ENST00000309428 PPP1R3BQ86XI6 285 aa11.23□□□□□ -0.61
RETREG3-201ENST00000309428 BHLHE23Q8NDY6 225 aa11.23□□□□□ -0.61
RETREG3-201ENST00000309428 OR2G3Q8NGZ4 309 aa11.23□□□□□ -0.61
RETREG3-201ENST00000309428 SLAMF6Q96DU3 332 aa11.23□□□□□ -0.61
RETREG3-201ENST00000309428 SGCZQ96LD1 299 aa11.23□□□□□ -0.61
RETREG3-201ENST00000309428 ZNF251Q9BRH9 671 aa11.23□□□□□ -0.61
RETREG3-201ENST00000309428 C1orf198Q9H425 327 aa11.23□□□□□ -0.61
RETREG3-201ENST00000309428 B3GALT5Q9Y2C3 310 aa11.23□□□□□ -0.61
RETREG3-201ENST00000309428 A0A1W2PR80 420 aa11.23□□□□□ -0.61
RETREG3-201ENST00000309428 MEX3AA1L020 520 aaKnown RBP11.23□□□□□ -0.61
RETREG3-201ENST00000309428 ZNF727A8MUV8 499 aa11.23□□□□□ -0.61
RETREG3-201ENST00000309428 PNLIPP16233 465 aa11.23□□□□□ -0.61
RETREG3-201ENST00000309428 ZNF84P51523 738 aa11.23□□□□□ -0.61
RETREG3-201ENST00000309428 FHL1Q13642 323 aa11.23□□□□□ -0.61
RETREG3-201ENST00000309428 CYB5R2Q6BCY4 276 aa11.23□□□□□ -0.61
RETREG3-201ENST00000309428 YRDCQ86U90 279 aaKnown RBP11.23□□□□□ -0.61
RETREG3-201ENST00000309428 APCDD1LQ8NCL9 501 aa11.23□□□□□ -0.61
RETREG3-201ENST00000309428 ASB5Q8WWX0 329 aa11.23□□□□□ -0.61
RETREG3-201ENST00000309428 OR10A2Q9H208 303 aa11.23□□□□□ -0.61
RETREG3-201ENST00000309428 LPAR3Q9UBY5 353 aa11.23□□□□□ -0.61
RETREG3-201ENST00000309428 GAB2Q9UQC2 676 aa11.23□□□□□ -0.61
RETREG3-201ENST00000309428 NPTNQ9Y639 398 aa11.23□□□□□ -0.61
RETREG3-201ENST00000309428 ZNF318Q5VUA4 2279 aa11.23□□□□□ -0.61
RETREG3-201ENST00000309428 NDUFS6O75380 124 aaKnown RBP11.22□□□□□ -0.61
RETREG3-201ENST00000309428 LCATP04180 440 aa11.22□□□□□ -0.61
RETREG3-201ENST00000309428 CCR5P51681 352 aa11.22□□□□□ -0.61
RETREG3-201ENST00000309428 TMEM33P57088 247 aa11.22□□□□□ -0.61
RETREG3-201ENST00000309428 HSF1Q00613 529 aa11.22□□□□□ -0.61
RETREG3-201ENST00000309428 RNF212Q495C1 297 aa11.22□□□□□ -0.61
RETREG3-201ENST00000309428 UQCC3Q6UW78 93 aa11.22□□□□□ -0.61
RETREG3-201ENST00000309428 KCNG3Q8TAE7 436 aa11.22□□□□□ -0.61
RETREG3-201ENST00000309428 SERINC1Q9NRX5 453 aa11.22□□□□□ -0.61
RETREG3-201ENST00000309428 UFSP2Q9NUQ7 469 aa11.22□□□□□ -0.61
RETREG3-201ENST00000309428 FREM1Q5H8C1 2179 aa11.22□□□□□ -0.61
RETREG3-201ENST00000309428 DSPP15924 2871 aaKnown RBP11.22□□□□□ -0.61
RETREG3-201ENST00000309428 ZNF705FA8MVS1 300 aaPredicted RBP11.22□□□□□ -0.61
RETREG3-201ENST00000309428 G3V3Q6 166 aa11.22□□□□□ -0.61
RETREG3-201ENST00000309428 H3BMH7 237 aa11.22□□□□□ -0.61
RETREG3-201ENST00000309428 CD63P08962 238 aa11.22□□□□□ -0.61
RETREG3-201ENST00000309428 ZNF705DP0CH99 300 aaPredicted RBP11.22□□□□□ -0.61
RETREG3-201ENST00000309428 ZNF705BP0CI00 300 aaPredicted RBP11.22□□□□□ -0.61
RETREG3-201ENST00000309428 MTCP1P56278 107 aa11.22□□□□□ -0.61
RETREG3-201ENST00000309428 TESK1Q15569 626 aa11.22□□□□□ -0.61
RETREG3-201ENST00000309428 LCN15Q6UWW0 184 aa11.22□□□□□ -0.61
RETREG3-201ENST00000309428 ZNF695Q8IW36 515 aa11.22□□□□□ -0.61
RETREG3-201ENST00000309428 UEVLDQ8IX04 471 aa11.22□□□□□ -0.61
RETREG3-201ENST00000309428 OR1N1Q8NGS0 311 aa11.22□□□□□ -0.61
RETREG3-201ENST00000309428 MAFAQ8NHW3 353 aaPredicted RBP11.22□□□□□ -0.61
RETREG3-201ENST00000309428 C1orf123Q9NWV4 160 aa11.22□□□□□ -0.61
RETREG3-201ENST00000309428 CLDN16Q9Y5I7 305 aa11.22□□□□□ -0.61
RETREG3-201ENST00000309428 FLVCR1Q9Y5Y0 555 aa11.22□□□□□ -0.61
RETREG3-201ENST00000309428 RAD51DO75771 328 aa11.22□□□□□ -0.61
RETREG3-201ENST00000309428 LPAR6P43657 344 aa11.22□□□□□ -0.61
RETREG3-201ENST00000309428 FASLGP48023 281 aa11.22□□□□□ -0.61
RETREG3-201ENST00000309428 EGR3Q06889 387 aa11.22□□□□□ -0.61
RETREG3-201ENST00000309428 MOB3CQ70IA8 216 aa11.22□□□□□ -0.61
RETREG3-201ENST00000309428 KCNK7Q9Y2U2 307 aa11.22□□□□□ -0.61
RETREG3-201ENST00000309428 SIT1Q9Y3P8 196 aa11.22□□□□□ -0.61
RETREG3-201ENST00000309428 SPTBN1Q01082 2364 aaKnown RBP11.21□□□□□ -0.61
RETREG3-201ENST00000309428 SMCO3A2RU48 225 aa11.21□□□□□ -0.61
RETREG3-201ENST00000309428 J3QRE1 110 aa11.21□□□□□ -0.61
RETREG3-201ENST00000309428 ACAA1P09110 424 aaPredicted RBP11.21□□□□□ -0.61
RETREG3-201ENST00000309428 EIF2S3P41091 472 aaKnown RBP11.21□□□□□ -0.61
RETREG3-201ENST00000309428 OR3A4PP47883 348 aa11.21□□□□□ -0.61
RETREG3-201ENST00000309428 PNLIPRP2P54317 469 aa11.21□□□□□ -0.61
RETREG3-201ENST00000309428 MYBPHQ13203 477 aa11.21□□□□□ -0.61
RETREG3-201ENST00000309428 LINC00469Q8N7U9 141 aa11.21□□□□□ -0.61
RETREG3-201ENST00000309428 ZSCAN4Q8NAM6 433 aaPredicted RBP11.21□□□□□ -0.61
RETREG3-201ENST00000309428 OR56B1Q8NGI3 324 aa11.21□□□□□ -0.61
RETREG3-201ENST00000309428 OR13C8Q8NGS7 320 aa11.21□□□□□ -0.61
RETREG3-201ENST00000309428 IL1F10Q8WWZ1 152 aa11.21□□□□□ -0.61
RETREG3-201ENST00000309428 C11orf40Q8WZ69 217 aa11.21□□□□□ -0.61
RETREG3-201ENST00000309428 INTS12Q96CB8 462 aaKnown RBP11.21□□□□□ -0.61
RETREG3-201ENST00000309428 C2orf50Q96LR7 162 aa11.21□□□□□ -0.61
RETREG3-201ENST00000309428 GAR1Q9NY12 217 aaKnown RBP11.21□□□□□ -0.61
RETREG3-201ENST00000309428 RNF222A6NCQ9 220 aa11.21□□□□□ -0.61
RETREG3-201ENST00000309428 DUS4LO95620 317 aaKnown RBP11.21□□□□□ -0.61
RETREG3-201ENST00000309428 HLA-HP01893 362 aa11.21□□□□□ -0.61
RETREG3-201ENST00000309428 POLR2GP62487 172 aaKnown RBP eCLIP11.21□□□□□ -0.61
RETREG3-201ENST00000309428 C5orf46Q6UWT4 87 aa11.21□□□□□ -0.61
RETREG3-201ENST00000309428 GRINAQ7Z429 371 aa11.21□□□□□ -0.61
RETREG3-201ENST00000309428 GSN-AS1Q9NRJ2 163 aa11.21□□□□□ -0.61
RETREG3-201ENST00000309428 ONECUT2O95948 504 aa11.21□□□□□ -0.62
RETREG3-201ENST00000309428 RPL23AP62750 156 aaKnown RBP11.21□□□□□ -0.62
RETREG3-201ENST00000309428 RIPPLY1Q0D2K3 151 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms