RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 TMEM268Q5VZI3 342 aa10.1□□□□□ -0.79
PCDHGC3-201ENST00000308177 TMPRSS7Q7RTY8 843 aa10.1□□□□□ -0.79
PCDHGC3-201ENST00000308177 C6orf201Q7Z4U5 140 aa10.1□□□□□ -0.79
PCDHGC3-201ENST00000308177 NAA40Q86UY6 237 aa10.1□□□□□ -0.79
PCDHGC3-201ENST00000308177 C2orf50Q96LR7 162 aa10.1□□□□□ -0.79
PCDHGC3-201ENST00000308177 AMELYQ99218 206 aa10.1□□□□□ -0.79
PCDHGC3-201ENST00000308177 RPS10P5Q9NQ39 176 aa10.1□□□□□ -0.79
PCDHGC3-201ENST00000308177 PRMT8Q9NR22 394 aaPredicted RBP10.1□□□□□ -0.79
PCDHGC3-201ENST00000308177 PCDHGA9Q9Y5G4 932 aaKnown RBP10.1□□□□□ -0.79
PCDHGC3-201ENST00000308177 ANKRD34BA5PLL1 514 aa10.09□□□□□ -0.79
PCDHGC3-201ENST00000308177 M0R1B8 84 aa10.09□□□□□ -0.79
PCDHGC3-201ENST00000308177 LANCL1O43813 399 aa10.09□□□□□ -0.79
PCDHGC3-201ENST00000308177 NXPH3O95157 252 aa10.09□□□□□ -0.79
PCDHGC3-201ENST00000308177 IFNA4P05014 189 aa10.09□□□□□ -0.79
PCDHGC3-201ENST00000308177 PLGLAQ15195 96 aa10.09□□□□□ -0.79
PCDHGC3-201ENST00000308177 TUSC5Q8IXB3 177 aa10.09□□□□□ -0.79
PCDHGC3-201ENST00000308177 CDH26Q8IXH8 852 aa10.09□□□□□ -0.79
PCDHGC3-201ENST00000308177 GVQW1Q8N7I0 195 aa10.09□□□□□ -0.79
PCDHGC3-201ENST00000308177 CLDN23Q96B33 292 aa10.09□□□□□ -0.79
PCDHGC3-201ENST00000308177 FAM234AQ9H0X4 552 aa10.09□□□□□ -0.79
PCDHGC3-201ENST00000308177 PLEKHA3Q9HB20 300 aa10.09□□□□□ -0.79
PCDHGC3-201ENST00000308177 ZNF354AO60765 605 aaPredicted RBP10.09□□□□□ -0.79
PCDHGC3-201ENST00000308177 LRP3O75074 770 aa10.09□□□□□ -0.79
PCDHGC3-201ENST00000308177 MT-CO2P00403 227 aa10.09□□□□□ -0.79
PCDHGC3-201ENST00000308177 CRYABP02511 175 aaKnown RBP10.09□□□□□ -0.79
PCDHGC3-201ENST00000308177 CST2P09228 141 aa10.09□□□□□ -0.79
PCDHGC3-201ENST00000308177 CCL2P13500 99 aa10.09□□□□□ -0.79
PCDHGC3-201ENST00000308177 PPT1P50897 306 aa10.09□□□□□ -0.79
PCDHGC3-201ENST00000308177 SNTB1Q13884 538 aaKnown RBP10.09□□□□□ -0.79
PCDHGC3-201ENST00000308177 SUMF2Q8NBJ7 301 aa10.09□□□□□ -0.79
PCDHGC3-201ENST00000308177 SLC30A7Q8NEW0 376 aa10.09□□□□□ -0.79
PCDHGC3-201ENST00000308177 MED30Q96HR3 178 aa10.09□□□□□ -0.79
PCDHGC3-201ENST00000308177 OR5B12Q96R08 314 aa10.09□□□□□ -0.79
PCDHGC3-201ENST00000308177 TAF9BQ9HBM6 251 aa10.09□□□□□ -0.79
PCDHGC3-201ENST00000308177 TMEM100Q9NV29 134 aa10.09□□□□□ -0.79
PCDHGC3-201ENST00000308177 A0A1W2PR80 420 aa10.09□□□□□ -0.79
PCDHGC3-201ENST00000308177 MRPS34P82930 218 aaKnown RBP10.09□□□□□ -0.79
PCDHGC3-201ENST00000308177 PRDX4Q13162 271 aa10.09□□□□□ -0.79
PCDHGC3-201ENST00000308177 BTN1A1Q13410 526 aa10.09□□□□□ -0.79
PCDHGC3-201ENST00000308177 LRRTM1Q86UE6 522 aa10.09□□□□□ -0.79
PCDHGC3-201ENST00000308177 OR5T1Q8NG75 326 aa10.09□□□□□ -0.79
PCDHGC3-201ENST00000308177 C22orf15Q8WYQ4 148 aa10.09□□□□□ -0.79
PCDHGC3-201ENST00000308177 RBMXL1Q96E39 390 aaKnown RBP10.09□□□□□ -0.79
PCDHGC3-201ENST00000308177 SDSLQ96GA7 329 aa10.09□□□□□ -0.79
PCDHGC3-201ENST00000308177 UBL7Q96S82 380 aaPredicted RBP10.09□□□□□ -0.79
PCDHGC3-201ENST00000308177 FAAP24Q9BTP7 215 aa10.09□□□□□ -0.79
PCDHGC3-201ENST00000308177 ANGPTL4Q9BY76 406 aa10.09□□□□□ -0.79
PCDHGC3-201ENST00000308177 IGKV3D-11A0A0A0MRZ8 115 aa10.09□□□□□ -0.79
PCDHGC3-201ENST00000308177 C17orf51A8MQB3 221 aa10.09□□□□□ -0.79
PCDHGC3-201ENST00000308177 FPR2P25090 351 aa10.09□□□□□ -0.79
PCDHGC3-201ENST00000308177 MRPL41Q8IXM3 137 aaKnown RBP10.09□□□□□ -0.79
PCDHGC3-201ENST00000308177 ADPRHL1Q8NDY3 354 aa10.09□□□□□ -0.79
PCDHGC3-201ENST00000308177 OR2M7Q8NG81 312 aa10.09□□□□□ -0.79
PCDHGC3-201ENST00000308177 EGLN1Q9GZT9 426 aa10.09□□□□□ -0.79
PCDHGC3-201ENST00000308177 NLRC5Q86WI3 1866 aa10.09□□□□□ -0.79
PCDHGC3-201ENST00000308177 IGLV1-36A0A0B4J1U3 117 aa10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 SPAARA0A1B0GVQ0 90 aa10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 A0A1W2PPV4 95 aa10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 NFYBP25208 207 aa10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 EGR4Q05215 589 aa10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 TCTEX1D2Q8WW35 142 aa10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 TMED6Q8WW62 240 aa10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 MARC2Q969Z3 335 aa10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 LOXL4Q96JB6 756 aa10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 ZNF285Q96NJ3 590 aa10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 DLL4Q9NR61 685 aa10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 NKX6-3A6NJ46 265 aa10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 TAAR5O14804 337 aa10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 ICMTO60725 284 aa10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 F2RL1P55085 397 aa10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 ROM1Q03395 351 aa10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 PPP1R1AQ13522 171 aa10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 PDLIM3Q53GG5 364 aaPredicted RBP10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 ATPAF1Q5TC12 328 aaPredicted RBP10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 DEFB108BQ8NET1 73 aa10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 OR4A16Q8NH70 328 aa10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 ZMIZ1Q9ULJ6 1067 aa10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 MPPED1O15442 326 aa10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 JTBO76095 146 aa10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 TTRP02766 147 aa10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 ADRA2CP18825 462 aa10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 AADACP22760 399 aa10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 SOX8P57073 446 aa10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 C3AR1Q16581 482 aa10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 LINC01590Q5TEZ4 76 aa10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 ZNF626Q68DY1 528 aa10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 ADAT3Q96EY9 351 aaPredicted RBP10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 KCNK17Q96T54 332 aa10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 PPP1R3CQ9UQK1 317 aa10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 RFPL4AA6NLU0 287 aa10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 TMEM229AB2RXF0 380 aa10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 RFPL4AL1F8VTS6 287 aa10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 UPK3AO75631 287 aa10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 ACTL6AO96019 429 aa10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 IFNA10P01566 189 aa10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 TMIGD3P0DMS9 266 aaPredicted RBP10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 CA6P23280 308 aa10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 RPL12P30050 165 aaKnown RBP10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 SNCAP37840 140 aa10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 FOXC1Q12948 553 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms