RNA–Protein interactions for RNA: ENST00000307301.11

MRPL39-201, Transcript of mitochondrial ribosomal protein L39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MRPL39, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39-201ENST00000307301 ZNF555Q8NEP9 628 aa17.27■□□□□ 0.36
MRPL39-201ENST00000307301 SPATA3Q8NHX4 192 aa17.27■□□□□ 0.36
MRPL39-201ENST00000307301 APH1BQ8WW43 257 aa17.27■□□□□ 0.36
MRPL39-201ENST00000307301 AQP3Q92482 292 aa17.27■□□□□ 0.36
MRPL39-201ENST00000307301 C12orf43Q96C57 262 aaKnown RBP17.27■□□□□ 0.36
MRPL39-201ENST00000307301 RDH12Q96NR8 316 aa17.27■□□□□ 0.36
MRPL39-201ENST00000307301 C19orf24Q9BVV8 132 aa17.27■□□□□ 0.36
MRPL39-201ENST00000307301 NUP50Q9UKX7 468 aa17.27■□□□□ 0.36
MRPL39-201ENST00000307301 A0A0A6YYJ9 748 aa17.26■□□□□ 0.35
MRPL39-201ENST00000307301 TFF1P04155 84 aa17.26■□□□□ 0.35
MRPL39-201ENST00000307301 PPIAL4GP0DN37 164 aa17.26■□□□□ 0.35
MRPL39-201ENST00000307301 AMY2BP19961 511 aa17.26■□□□□ 0.35
MRPL39-201ENST00000307301 KCTD20Q7Z5Y7 419 aa17.26■□□□□ 0.35
MRPL39-201ENST00000307301 RDH10Q8IZV5 341 aa17.26■□□□□ 0.35
MRPL39-201ENST00000307301 BPIFB2Q8N4F0 458 aa17.26■□□□□ 0.35
MRPL39-201ENST00000307301 OR2G2Q8NGZ5 317 aa17.26■□□□□ 0.35
MRPL39-201ENST00000307301 ST8SIA4Q92187 359 aa17.26■□□□□ 0.35
MRPL39-201ENST00000307301 UPRTQ96BW1 309 aa17.26■□□□□ 0.35
MRPL39-201ENST00000307301 ADI1Q9BV57 179 aa17.26■□□□□ 0.35
MRPL39-201ENST00000307301 PLEKHA1Q9HB21 404 aa17.26■□□□□ 0.35
MRPL39-201ENST00000307301 ZNF69Q9UC07 566 aa17.26■□□□□ 0.35
MRPL39-201ENST00000307301 MYRFQ9Y2G1 1151 aa17.26■□□□□ 0.35
MRPL39-201ENST00000307301 LOC107986453A0A1B0GWG9 222 aa17.25■□□□□ 0.35
MRPL39-201ENST00000307301 PQLC2LA1A4F0 135 aa17.25■□□□□ 0.35
MRPL39-201ENST00000307301 J3QLW9 94 aa17.25■□□□□ 0.35
MRPL39-201ENST00000307301 UBCP0CG48 685 aaKnown RBP17.25■□□□□ 0.35
MRPL39-201ENST00000307301 ZNF19P17023 458 aa17.25■□□□□ 0.35
MRPL39-201ENST00000307301 GLRA1P23415 457 aa17.25■□□□□ 0.35
MRPL39-201ENST00000307301 PEX2P28328 305 aa17.25■□□□□ 0.35
MRPL39-201ENST00000307301 NANOS3P60323 173 aaKnown RBP17.25■□□□□ 0.35
MRPL39-201ENST00000307301 FGF12P61328 243 aa17.25■□□□□ 0.35
MRPL39-201ENST00000307301 BTN2A1Q7KYR7 527 aa17.25■□□□□ 0.35
MRPL39-201ENST00000307301 SLC36A1Q7Z2H8 476 aa17.25■□□□□ 0.35
MRPL39-201ENST00000307301 LHFPL3Q86UP9 236 aa17.25■□□□□ 0.35
MRPL39-201ENST00000307301 ZNF671Q8TAW3 534 aa17.25■□□□□ 0.35
MRPL39-201ENST00000307301 C4orf36Q96KX1 117 aa17.25■□□□□ 0.35
MRPL39-201ENST00000307301 SUCNR1Q9BXA5 334 aa17.25■□□□□ 0.35
MRPL39-201ENST00000307301 FRRS1LQ9P0K9 344 aa17.25■□□□□ 0.35
MRPL39-201ENST00000307301 NLKQ9UBE8 527 aa17.25■□□□□ 0.35
MRPL39-201ENST00000307301 IGHV3OR16-10A0A075B7F0 116 aa17.24■□□□□ 0.35
MRPL39-201ENST00000307301 ANKRD61A6NGH8 418 aa17.24■□□□□ 0.35
MRPL39-201ENST00000307301 CLIC3O95833 236 aa17.24■□□□□ 0.35
MRPL39-201ENST00000307301 IGHV4-38-2P0DP08 117 aa17.24■□□□□ 0.35
MRPL39-201ENST00000307301 SELLP14151 372 aa17.24■□□□□ 0.35
MRPL39-201ENST00000307301 FPR2P25090 351 aa17.24■□□□□ 0.35
MRPL39-201ENST00000307301 HAAOP46952 286 aa17.24■□□□□ 0.35
MRPL39-201ENST00000307301 HILS1P60008 231 aa17.24■□□□□ 0.35
MRPL39-201ENST00000307301 ACTA2P62736 377 aa17.24■□□□□ 0.35
MRPL39-201ENST00000307301 ACTG2P63267 376 aa17.24■□□□□ 0.35
MRPL39-201ENST00000307301 IKZF1Q13422 519 aa17.24■□□□□ 0.35
MRPL39-201ENST00000307301 GALEQ14376 348 aa17.24■□□□□ 0.35
MRPL39-201ENST00000307301 SMN1Q16637 294 aaKnown RBP17.24■□□□□ 0.35
MRPL39-201ENST00000307301 ATPAF1Q5TC12 328 aaPredicted RBP17.24■□□□□ 0.35
MRPL39-201ENST00000307301 FDX2Q6P4F2 183 aa17.24■□□□□ 0.35
MRPL39-201ENST00000307301 USP43Q70EL4 1123 aa17.24■□□□□ 0.35
MRPL39-201ENST00000307301 ANGPTL6Q8NI99 470 aa17.24■□□□□ 0.35
MRPL39-201ENST00000307301 PELI1Q96FA3 418 aa17.24■□□□□ 0.35
MRPL39-201ENST00000307301 ALG8Q9BVK2 526 aa17.24■□□□□ 0.35
MRPL39-201ENST00000307301 TRAV40A0A0B4J280 105 aa17.23■□□□□ 0.35
MRPL39-201ENST00000307301 OR2AT4A6NND4 320 aa17.23■□□□□ 0.35
MRPL39-201ENST00000307301 NDUFB3O43676 98 aa17.23■□□□□ 0.35
MRPL39-201ENST00000307301 SYNGR1O43759 233 aa17.23■□□□□ 0.35
MRPL39-201ENST00000307301 WBP4O75554 376 aaKnown RBP17.23■□□□□ 0.35
MRPL39-201ENST00000307301 FADS2O95864 444 aaKnown RBP17.23■□□□□ 0.35
MRPL39-201ENST00000307301 IGHA1P01876 353 aa17.23■□□□□ 0.35
MRPL39-201ENST00000307301 HTR1AP08908 422 aa17.23■□□□□ 0.35
MRPL39-201ENST00000307301 TGM4P49221 684 aa17.23■□□□□ 0.35
MRPL39-201ENST00000307301 RAB40BQ12829 278 aa17.23■□□□□ 0.35
MRPL39-201ENST00000307301 UBE2V2Q15819 145 aa17.23■□□□□ 0.35
MRPL39-201ENST00000307301 ZNF691Q5VV52 312 aa17.23■□□□□ 0.35
MRPL39-201ENST00000307301 ZNF573Q86YE8 665 aa17.23■□□□□ 0.35
MRPL39-201ENST00000307301 BCL6BQ8N143 479 aaPredicted RBP17.23■□□□□ 0.35
MRPL39-201ENST00000307301 PACRGLQ8N7B6 248 aa17.23■□□□□ 0.35
MRPL39-201ENST00000307301 PNLDC1Q8NA58 520 aaKnown RBP17.23■□□□□ 0.35
MRPL39-201ENST00000307301 CCDC54Q8NEL0 328 aa17.23■□□□□ 0.35
MRPL39-201ENST00000307301 OR52I1Q8NGK6 324 aa17.23■□□□□ 0.35
MRPL39-201ENST00000307301 TRMT10AQ8TBZ6 339 aaKnown RBP17.23■□□□□ 0.35
MRPL39-201ENST00000307301 NPRL2Q8WTW4 380 aa17.23■□□□□ 0.35
MRPL39-201ENST00000307301 CYGBQ8WWM9 190 aa17.23■□□□□ 0.35
MRPL39-201ENST00000307301 TMIGD2Q96BF3 282 aa17.23■□□□□ 0.35
MRPL39-201ENST00000307301 ZNF488Q96MN9 340 aa17.23■□□□□ 0.35
MRPL39-201ENST00000307301 GAFA1Q96PS6 74 aa17.23■□□□□ 0.35
MRPL39-201ENST00000307301 DNTTIP1Q9H147 329 aa17.23■□□□□ 0.35
MRPL39-201ENST00000307301 ISG20L2Q9H9L3 353 aaKnown RBP17.23■□□□□ 0.35
MRPL39-201ENST00000307301 RPL36Q9Y3U8 105 aaKnown RBP17.23■□□□□ 0.35
MRPL39-201ENST00000307301 NKX6-3A6NJ46 265 aa17.22■□□□□ 0.35
MRPL39-201ENST00000307301 ZNF879B4DU55 563 aa17.22■□□□□ 0.35
MRPL39-201ENST00000307301 J3QT63 122 aa17.22■□□□□ 0.35
MRPL39-201ENST00000307301 ECDO95905 644 aaPredicted RBP17.22■□□□□ 0.35
MRPL39-201ENST00000307301 LIPFP07098 398 aa17.22■□□□□ 0.35
MRPL39-201ENST00000307301 SFTPBP07988 381 aa17.22■□□□□ 0.35
MRPL39-201ENST00000307301 TMEM244Q5VVB8 128 aa17.22■□□□□ 0.35
MRPL39-201ENST00000307301 ZNF788Q6ZQV5 615 aa17.22■□□□□ 0.35
MRPL39-201ENST00000307301 POC1AQ8NBT0 407 aa17.22■□□□□ 0.35
MRPL39-201ENST00000307301 MRPL48Q96GC5 212 aaKnown RBP17.22■□□□□ 0.35
MRPL39-201ENST00000307301 ZNF649Q9BS31 505 aa17.22■□□□□ 0.35
MRPL39-201ENST00000307301 PCGF1Q9BSM1 259 aa17.22■□□□□ 0.35
MRPL39-201ENST00000307301 C8orf4Q9NR00 106 aa17.22■□□□□ 0.35
MRPL39-201ENST00000307301 MRPS18AQ9NVS2 196 aaKnown RBP17.22■□□□□ 0.35
MRPL39-201ENST00000307301 ERVK13-1Q9NX77 482 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms