RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 NANOGP1Q8N7R0 232 aa9.23□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 SCCPDHQ8NBX0 429 aa9.23□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 C19orf18Q8NEA5 215 aa9.23□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 DEFB108BQ8NET1 73 aa9.23□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 OR51A4Q8NGJ6 313 aa9.23□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 OR10AC1Q8NH08 325 aa9.23□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 ZNF671Q8TAW3 534 aa9.23□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 GPR148Q8TDV2 347 aa9.23□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 MSI2Q96DH6 328 aaKnown RBP9.23□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 ADAT3Q96EY9 351 aaPredicted RBP9.23□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 TMEM246Q9BRR3 403 aa9.23□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 LPAR2Q9HBW0 351 aa9.23□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 LRCH1Q9Y2L9 728 aa9.23□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 PCDHGB5Q9Y5G0 923 aa9.23□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 ACANP16112 2415 aa9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 PQLC2LA1A4F0 135 aa9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 NKX6-3A6NJ46 265 aa9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 A8MV72 311 aaPredicted RBP9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 SRRM5B3KS81 715 aa9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 FAM157AC9JC47 383 aa9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 J3QT63 122 aa9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 OGG1O15527 345 aa9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 NDUFA2O43678 99 aa9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 FOXH1O75593 365 aa9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 CYB5AP00167 134 aa9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 ATF1P18846 271 aa9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 PRKACBP22694 351 aa9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 GLRA1P23415 457 aa9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 CPT2P23786 658 aa9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 CRHBPP24387 322 aa9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 AZGP1P25311 298 aaKnown RBP9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 FUT6P51993 359 aa9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 ATP1B3P54709 279 aa9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 GMFBP60983 142 aa9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 LMO4P61968 165 aa9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 GNB2P62879 340 aa9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 BDH1Q02338 343 aa9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 KRTAP1-1Q07627 177 aa9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 MED22Q15528 200 aa9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 UBE2V2Q15819 145 aa9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 FAM76BQ5HYJ3 339 aa9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 RNLSQ5VYX0 342 aa9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 XAF1Q6GPH4 301 aa9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 LHFPL2Q6ZUX7 228 aa9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 SERPINA12Q8IW75 414 aa9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 C11orf53Q8IXP5 236 aa9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 ZFP41Q8N8Y5 198 aa9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 OR5D14Q8NGL3 314 aa9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 OR13C9Q8NGT0 318 aa9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 RPS4Y2Q8TD47 263 aa9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 SPSB1Q96BD6 273 aa9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 NEIL1Q96FI4 390 aaPredicted RBP9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 CPNE2Q96FN4 548 aaPredicted RBP9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 C1orf159Q96HA4 380 aa9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 CDCA4Q9BXL8 241 aa9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 FGF23Q9GZV9 251 aaPredicted RBP9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 OR51I2Q9H344 312 aa9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 ZCCHC4Q9H5U6 513 aa9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 METTL17Q9H7H0 456 aaPredicted RBP9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 TMEM165Q9HC07 324 aa9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 PAK1IP1Q9NWT1 392 aaPredicted RBP9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 ZNF281Q9Y2X9 895 aa9.22□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 IGHV3OR15-7A0A075B7D8 119 aa9.21□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 TRAV20A0A0B4J274 112 aa9.21□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 F5H0A9 414 aaPredicted RBP9.21□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 MAGEB3O15480 346 aa9.21□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 AKR7A2O43488 359 aa9.21□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 DENRO43583 198 aaKnown RBP9.21□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 SULT1B1O43704 296 aa9.21□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 LALBAP00709 142 aa9.21□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 PLATP00750 562 aa9.21□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 LHBP01229 141 aa9.21□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 GYPAP02724 150 aa9.21□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 MT-ND2P03891 347 aa9.21□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 HCKP08631 526 aa9.21□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 MUC1P15941 1255 aaPredicted RBP9.21□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 EGR1P18146 543 aa9.21□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 CELP19835 753 aa9.21□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 HNF1AP20823 631 aa9.21□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 CFHR2P36980 270 aa9.21□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 SOX2P48431 317 aa9.21□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 RBP2P50120 134 aa9.21□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 DVL1P1P54792 670 aaPredicted RBP9.21□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 GABARAPL2P60520 117 aa9.21□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 SPHARQ15513 63 aa9.21□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 SMIM21Q3B7S5 101 aa9.21□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 YIF1BQ5BJH7 314 aa9.21□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 TEX36Q5VZQ5 186 aa9.21□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 DMKNQ6E0U4 476 aaPredicted RBP9.21□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 PRSS48Q7RTY5 328 aa9.21□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 DNAAF1Q8NEP3 725 aa9.21□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 AQP3Q92482 292 aa9.21□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 THRSPQ92748 146 aa9.21□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 UFD1Q92890 307 aa9.21□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 TMEM106AQ96A25 262 aa9.21□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 TMEM186Q96B77 213 aa9.21□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 TMIGD2Q96BF3 282 aa9.21□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 C12orf43Q96C57 262 aaKnown RBP9.21□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 OPALINQ96PE5 141 aa9.21□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 SSBP3Q9BWW4 388 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms