RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 PET100P0DJ07 73 aa13.24□□□□□ -0.29
CSDC2-201ENST00000306149 PRF1P14222 555 aa13.24□□□□□ -0.29
CSDC2-201ENST00000306149 PJVKQ0ZLH3 352 aa13.24□□□□□ -0.29
CSDC2-201ENST00000306149 EIF3IQ13347 325 aaKnown RBP13.24□□□□□ -0.29
CSDC2-201ENST00000306149 HLA-BQ31612 363 aa13.24□□□□□ -0.29
CSDC2-201ENST00000306149 CHRFAM7AQ494W8 412 aa13.24□□□□□ -0.29
CSDC2-201ENST00000306149 NSUN5P2Q63ZY6 315 aa13.24□□□□□ -0.29
CSDC2-201ENST00000306149 H3F3CQ6NXT2 135 aa13.24□□□□□ -0.29
CSDC2-201ENST00000306149 ADAMTS17Q8TE56 1095 aa13.24□□□□□ -0.29
CSDC2-201ENST00000306149 DNAJB11Q9UBS4 358 aa13.24□□□□□ -0.29
CSDC2-201ENST00000306149 DHRS7CA6NNS2 312 aa13.23□□□□□ -0.29
CSDC2-201ENST00000306149 TNFSF11O14788 317 aa13.23□□□□□ -0.29
CSDC2-201ENST00000306149 DHRS3O75911 302 aa13.23□□□□□ -0.29
CSDC2-201ENST00000306149 SNAPINO95295 136 aa13.23□□□□□ -0.29
CSDC2-201ENST00000306149 PVALBP20472 110 aaPredicted RBP13.23□□□□□ -0.29
CSDC2-201ENST00000306149 LYSMD4Q5XG99 296 aa13.23□□□□□ -0.29
CSDC2-201ENST00000306149 POC1AQ8NBT0 407 aa13.23□□□□□ -0.29
CSDC2-201ENST00000306149 MR1Q95460 341 aa13.23□□□□□ -0.29
CSDC2-201ENST00000306149 FBXO17Q96EF6 278 aa13.23□□□□□ -0.29
CSDC2-201ENST00000306149 SAT2Q96F10 170 aaPredicted RBP13.23□□□□□ -0.29
CSDC2-201ENST00000306149 SHDQ96IW2 340 aa13.23□□□□□ -0.29
CSDC2-201ENST00000306149 C2orf50Q96LR7 162 aa13.23□□□□□ -0.29
CSDC2-201ENST00000306149 DUSP23Q9BVJ7 150 aa13.23□□□□□ -0.29
CSDC2-201ENST00000306149 PROK2Q9HC23 129 aa13.23□□□□□ -0.29
CSDC2-201ENST00000306149 ZMAT5Q9UDW3 170 aaKnown RBP13.23□□□□□ -0.29
CSDC2-201ENST00000306149 FAM186AA6NE01 2351 aa13.23□□□□□ -0.29
CSDC2-201ENST00000306149 M0R135 149 aa13.23□□□□□ -0.29
CSDC2-201ENST00000306149 DHHO43323 396 aa13.23□□□□□ -0.29
CSDC2-201ENST00000306149 ZIC3O60481 467 aa13.23□□□□□ -0.29
CSDC2-201ENST00000306149 CSTBP04080 98 aaKnown RBP13.23□□□□□ -0.29
CSDC2-201ENST00000306149 UMODP07911 640 aa13.23□□□□□ -0.29
CSDC2-201ENST00000306149 CCL4P13236 92 aa13.23□□□□□ -0.29
CSDC2-201ENST00000306149 RPS2P15880 293 aaKnown RBP13.23□□□□□ -0.29
CSDC2-201ENST00000306149 ADH6P28332 368 aa13.23□□□□□ -0.29
CSDC2-201ENST00000306149 RRADP55042 308 aa13.23□□□□□ -0.29
CSDC2-201ENST00000306149 TAS2R46P59540 309 aa13.23□□□□□ -0.29
CSDC2-201ENST00000306149 LSM6P62312 80 aaKnown RBP13.23□□□□□ -0.29
CSDC2-201ENST00000306149 ZNF468Q5VIY5 522 aaPredicted RBP13.23□□□□□ -0.29
CSDC2-201ENST00000306149 BRICD5Q6PL45 260 aa13.23□□□□□ -0.29
CSDC2-201ENST00000306149 CBLN2Q8IUK8 224 aa13.23□□□□□ -0.29
CSDC2-201ENST00000306149 LILRB1Q8NHL6 650 aaPredicted RBP13.23□□□□□ -0.29
CSDC2-201ENST00000306149 ZNF799Q96GE5 643 aa13.23□□□□□ -0.29
CSDC2-201ENST00000306149 PIGQQ9BRB3 760 aa13.23□□□□□ -0.29
CSDC2-201ENST00000306149 SLC5A7Q9GZV3 580 aa13.23□□□□□ -0.29
CSDC2-201ENST00000306149 TLNRD1Q9H1K6 362 aa13.23□□□□□ -0.29
CSDC2-201ENST00000306149 SLC26A1Q9H2B4 701 aa13.23□□□□□ -0.29
CSDC2-201ENST00000306149 UQCC1Q9NVA1 299 aa13.23□□□□□ -0.29
CSDC2-201ENST00000306149 MLXQ9UH92 298 aa13.23□□□□□ -0.29
CSDC2-201ENST00000306149 LHX6Q9UPM6 363 aa13.23□□□□□ -0.29
CSDC2-201ENST00000306149 FRYQ5TBA9 3013 aa13.22□□□□□ -0.29
CSDC2-201ENST00000306149 FOXI3A8MTJ6 420 aaPredicted RBP13.22□□□□□ -0.29
CSDC2-201ENST00000306149 ZNF705EA8MWA4 302 aaPredicted RBP13.22□□□□□ -0.29
CSDC2-201ENST00000306149 SPRY1O43609 319 aaPredicted RBP13.22□□□□□ -0.29
CSDC2-201ENST00000306149 TMEM225BP0DP42 221 aa13.22□□□□□ -0.29
CSDC2-201ENST00000306149 OR9K2Q8NGE7 335 aa13.22□□□□□ -0.29
CSDC2-201ENST00000306149 SMIM8Q96KF7 97 aa13.22□□□□□ -0.29
CSDC2-201ENST00000306149 PLEKHJ1Q9NW61 149 aa13.22□□□□□ -0.29
CSDC2-201ENST00000306149 WNT16Q9UBV4 365 aa13.22□□□□□ -0.29
CSDC2-201ENST00000306149 SHANK1Q9Y566 2161 aa13.22□□□□□ -0.29
CSDC2-201ENST00000306149 A0A0J9YW62 118 aa13.22□□□□□ -0.29
CSDC2-201ENST00000306149 ACKR3P25106 362 aa13.22□□□□□ -0.29
CSDC2-201ENST00000306149 PTGER4P35408 488 aa13.22□□□□□ -0.29
CSDC2-201ENST00000306149 IL15RAQ13261 267 aa13.22□□□□□ -0.29
CSDC2-201ENST00000306149 SHEQ5VZ18 495 aa13.22□□□□□ -0.29
CSDC2-201ENST00000306149 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.22□□□□□ -0.29
CSDC2-201ENST00000306149 C20orf196Q8IYI0 205 aa13.22□□□□□ -0.29
CSDC2-201ENST00000306149 NECAB3Q96P71 396 aaPredicted RBP13.22□□□□□ -0.29
CSDC2-201ENST00000306149 ULBP2Q9BZM5 246 aa13.22□□□□□ -0.29
CSDC2-201ENST00000306149 TREM1Q9NP99 234 aa13.22□□□□□ -0.29
CSDC2-201ENST00000306149 DKKL1Q9UK85 242 aa13.22□□□□□ -0.29
CSDC2-201ENST00000306149 URB1O60287 2271 aaKnown RBP13.21□□□□□ -0.29
CSDC2-201ENST00000306149 IGHV1-45A0A0A0MS14 117 aa13.21□□□□□ -0.29
CSDC2-201ENST00000306149 LOC102725191A0A1B0GVB3 256 aa13.21□□□□□ -0.29
CSDC2-201ENST00000306149 FAM230AA0A1W2PPH8 454 aa13.21□□□□□ -0.29
CSDC2-201ENST00000306149 PMS2P1A4D2B8 440 aa13.21□□□□□ -0.29
CSDC2-201ENST00000306149 IGLV3-1P01715 115 aa13.21□□□□□ -0.29
CSDC2-201ENST00000306149 SERPINA5P05154 406 aa13.21□□□□□ -0.29
CSDC2-201ENST00000306149 CTSSP25774 331 aa13.21□□□□□ -0.29
CSDC2-201ENST00000306149 THBS4P35443 961 aa13.21□□□□□ -0.29
CSDC2-201ENST00000306149 HOXA1P49639 335 aaPredicted RBP13.21□□□□□ -0.29
CSDC2-201ENST00000306149 TAF9Q16594 264 aa13.21□□□□□ -0.29
CSDC2-201ENST00000306149 ZNF239Q16600 458 aaKnown RBP13.21□□□□□ -0.29
CSDC2-201ENST00000306149 TMEM123Q8N131 208 aa13.21□□□□□ -0.29
CSDC2-201ENST00000306149 TMEM156Q8N614 296 aa13.21□□□□□ -0.29
CSDC2-201ENST00000306149 ZIC4Q8N9L1 334 aa13.21□□□□□ -0.29
CSDC2-201ENST00000306149 SGK3Q96BR1 496 aa13.21□□□□□ -0.29
CSDC2-201ENST00000306149 ZNF2Q9BSG1 426 aaPredicted RBP13.21□□□□□ -0.29
CSDC2-201ENST00000306149 FAAP24Q9BTP7 215 aa13.21□□□□□ -0.29
CSDC2-201ENST00000306149 SRXN1Q9BYN0 137 aa13.21□□□□□ -0.29
CSDC2-201ENST00000306149 CHST5Q9GZS9 411 aa13.21□□□□□ -0.29
CSDC2-201ENST00000306149 HRH4Q9H3N8 390 aa13.21□□□□□ -0.29
CSDC2-201ENST00000306149 V9GYS6 101 aa13.21□□□□□ -0.29
CSDC2-201ENST00000306149 FIGNL2A6NMB9 653 aa13.21□□□□□ -0.29
CSDC2-201ENST00000306149 GLI4P10075 376 aa13.21□□□□□ -0.29
CSDC2-201ENST00000306149 LIFP15018 202 aa13.21□□□□□ -0.29
CSDC2-201ENST00000306149 RCC1P18754 421 aaPredicted RBP13.21□□□□□ -0.29
CSDC2-201ENST00000306149 NTF4P34130 210 aa13.21□□□□□ -0.29
CSDC2-201ENST00000306149 OPRM1P35372 400 aa13.21□□□□□ -0.29
CSDC2-201ENST00000306149 MTCP1P56278 107 aa13.21□□□□□ -0.29
CSDC2-201ENST00000306149 EIF5AP63241 154 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms