RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 GIMAP1Q8WWP7 306 aa19.2■□□□□ 0.66
SMAD1-201ENST00000302085 PAPOLGQ9BWT3 736 aaKnown RBP19.2■□□□□ 0.66
SMAD1-201ENST00000302085 TINAGL1Q9GZM7 467 aaPredicted RBP19.2■□□□□ 0.66
SMAD1-201ENST00000302085 FGF23Q9GZV9 251 aaPredicted RBP19.2■□□□□ 0.66
SMAD1-201ENST00000302085 OR51J1Q9H342 316 aa19.2■□□□□ 0.66
SMAD1-201ENST00000302085 ZNF71Q9NQZ8 489 aaPredicted RBP19.2■□□□□ 0.66
SMAD1-201ENST00000302085 DCHS1Q96JQ0 3298 aa19.2■□□□□ 0.66
SMAD1-201ENST00000302085 ZNF736B4DX44 427 aaPredicted RBP19.19■□□□□ 0.66
SMAD1-201ENST00000302085 M0QYG6 137 aa19.19■□□□□ 0.66
SMAD1-201ENST00000302085 MFNGO00587 321 aa19.19■□□□□ 0.66
SMAD1-201ENST00000302085 HTR3BO95264 441 aa19.19■□□□□ 0.66
SMAD1-201ENST00000302085 IDH3GP51553 393 aaPredicted RBP19.19■□□□□ 0.66
SMAD1-201ENST00000302085 CD83Q01151 205 aa19.19■□□□□ 0.66
SMAD1-201ENST00000302085 PDZK1IP1Q13113 114 aa19.19■□□□□ 0.66
SMAD1-201ENST00000302085 RSU1Q15404 277 aa19.19■□□□□ 0.66
SMAD1-201ENST00000302085 ST3GAL2Q16842 350 aa19.19■□□□□ 0.66
SMAD1-201ENST00000302085 CD163Q86VB7 1156 aa19.19■□□□□ 0.66
SMAD1-201ENST00000302085 NAXEQ8NCW5 288 aa19.19■□□□□ 0.66
SMAD1-201ENST00000302085 C1orf162Q8NEQ5 155 aaPredicted RBP19.19■□□□□ 0.66
SMAD1-201ENST00000302085 CSNK2A3Q8NEV1 391 aa19.19■□□□□ 0.66
SMAD1-201ENST00000302085 FYTTD1Q96QD9 318 aaKnown RBP19.19■□□□□ 0.66
SMAD1-201ENST00000302085 MGAQ8IWI9 3026 aa19.19■□□□□ 0.66
SMAD1-201ENST00000302085 CD300LBA8K4G0 201 aa19.19■□□□□ 0.66
SMAD1-201ENST00000302085 ZNF735P0CB33 412 aa19.19■□□□□ 0.66
SMAD1-201ENST00000302085 BLVRBP30043 206 aaPredicted RBP19.19■□□□□ 0.66
SMAD1-201ENST00000302085 CXorf67Q86X51 503 aaPredicted RBP19.19■□□□□ 0.66
SMAD1-201ENST00000302085 Q8NA96 180 aa19.19■□□□□ 0.66
SMAD1-201ENST00000302085 BEST4Q8NFU0 473 aa19.19■□□□□ 0.66
SMAD1-201ENST00000302085 DMRTB1Q96MA1 342 aa19.19■□□□□ 0.66
SMAD1-201ENST00000302085 OPA3Q9H6K4 179 aa19.19■□□□□ 0.66
SMAD1-201ENST00000302085 NPDC1Q9NQX5 325 aaPredicted RBP19.19■□□□□ 0.66
SMAD1-201ENST00000302085 ZNF629Q9UEG4 869 aaPredicted RBP19.19■□□□□ 0.66
SMAD1-201ENST00000302085 ANKRD11Q6UB99 2663 aaPredicted RBP19.19■□□□□ 0.66
SMAD1-201ENST00000302085 PQLC2LA1A4F0 135 aa19.18■□□□□ 0.66
SMAD1-201ENST00000302085 CBR1P16152 277 aa19.18■□□□□ 0.66
SMAD1-201ENST00000302085 PTGER4P35408 488 aa19.18■□□□□ 0.66
SMAD1-201ENST00000302085 NKX2-5P52952 324 aaPredicted RBP19.18■□□□□ 0.66
SMAD1-201ENST00000302085 PNLIPRP3Q17RR3 467 aa19.18■□□□□ 0.66
SMAD1-201ENST00000302085 OR5L1Q8NGL2 311 aa19.18■□□□□ 0.66
SMAD1-201ENST00000302085 FAM57AQ8TBR7 257 aa19.18■□□□□ 0.66
SMAD1-201ENST00000302085 Q96M66 194 aa19.18■□□□□ 0.66
SMAD1-201ENST00000302085 C1QTNF6Q9BXI9 259 aa19.18■□□□□ 0.66
SMAD1-201ENST00000302085 CEP295Q9C0D2 2601 aa19.17■□□□□ 0.66
SMAD1-201ENST00000302085 AGFG2O95081 481 aa19.17■□□□□ 0.66
SMAD1-201ENST00000302085 HPXP02790 462 aa19.17■□□□□ 0.66
SMAD1-201ENST00000302085 CRHP06850 196 aa19.17■□□□□ 0.66
SMAD1-201ENST00000302085 IL32P24001 234 aa19.17■□□□□ 0.66
SMAD1-201ENST00000302085 RAD52P43351 418 aa19.17■□□□□ 0.66
SMAD1-201ENST00000302085 GNG2P59768 71 aa19.17■□□□□ 0.66
SMAD1-201ENST00000302085 CBX3Q13185 183 aa19.17■□□□□ 0.66
SMAD1-201ENST00000302085 FCN2Q15485 313 aa19.17■□□□□ 0.66
SMAD1-201ENST00000302085 CALHM1Q8IU99 346 aa19.17■□□□□ 0.66
SMAD1-201ENST00000302085 PXT1Q8NFP0 134 aa19.17■□□□□ 0.66
SMAD1-201ENST00000302085 GINS4Q9BRT9 223 aa19.17■□□□□ 0.66
SMAD1-201ENST00000302085 PECRQ9BY49 303 aa19.17■□□□□ 0.66
SMAD1-201ENST00000302085 MED28Q9H204 178 aa19.17■□□□□ 0.66
SMAD1-201ENST00000302085 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP19.17■□□□□ 0.66
SMAD1-201ENST00000302085 PYCARD-AS1I3L0S3 204 aa19.17■□□□□ 0.66
SMAD1-201ENST00000302085 CPT2P23786 658 aa19.17■□□□□ 0.66
SMAD1-201ENST00000302085 RBMS2Q15434 407 aaKnown RBP19.17■□□□□ 0.66
SMAD1-201ENST00000302085 OR52W1Q6IF63 320 aa19.17■□□□□ 0.66
SMAD1-201ENST00000302085 C3P1Q6ZMU1 363 aa19.17■□□□□ 0.66
SMAD1-201ENST00000302085 CISD2Q8N5K1 135 aaKnown RBP19.17■□□□□ 0.66
SMAD1-201ENST00000302085 HPSE2Q8WWQ2 592 aa19.17■□□□□ 0.66
SMAD1-201ENST00000302085 CDH20Q9HBT6 801 aa19.17■□□□□ 0.66
SMAD1-201ENST00000302085 INTS1Q8N201 2190 aaKnown RBP19.16■□□□□ 0.66
SMAD1-201ENST00000302085 FIGNL2A6NMB9 653 aa19.16■□□□□ 0.66
SMAD1-201ENST00000302085 LILRA1O75019 489 aa19.16■□□□□ 0.66
SMAD1-201ENST00000302085 CSTBP04080 98 aaKnown RBP19.16■□□□□ 0.66
SMAD1-201ENST00000302085 ANXA7P20073 488 aaKnown RBP19.16■□□□□ 0.66
SMAD1-201ENST00000302085 MECP2P51608 486 aaKnown RBP19.16■□□□□ 0.66
SMAD1-201ENST00000302085 CEACAM21Q3KPI0 293 aa19.16■□□□□ 0.66
SMAD1-201ENST00000302085 SPATA46Q5T0L3 261 aa19.16■□□□□ 0.66
SMAD1-201ENST00000302085 IFT46Q9NQC8 304 aa19.16■□□□□ 0.66
SMAD1-201ENST00000302085 IL36GQ9NZH8 169 aa19.16■□□□□ 0.66
SMAD1-201ENST00000302085 EIF3KQ9UBQ5 218 aaKnown RBP19.16■□□□□ 0.66
SMAD1-201ENST00000302085 ANAPC10Q9UM13 185 aa19.16■□□□□ 0.66
SMAD1-201ENST00000302085 TIMP3P35625 211 aa19.15■□□□□ 0.66
SMAD1-201ENST00000302085 MRPL49Q13405 166 aaKnown RBP19.15■□□□□ 0.66
SMAD1-201ENST00000302085 P2RY6Q15077 328 aa19.15■□□□□ 0.66
SMAD1-201ENST00000302085 ZDHHC23Q8IYP9 409 aa19.15■□□□□ 0.66
SMAD1-201ENST00000302085 OR51F2Q8NH61 342 aa19.15■□□□□ 0.66
SMAD1-201ENST00000302085 ST8SIA4Q92187 359 aa19.15■□□□□ 0.66
SMAD1-201ENST00000302085 SLC6A7Q99884 636 aa19.15■□□□□ 0.66
SMAD1-201ENST00000302085 A0A1B0GUH1 482 aa19.15■□□□□ 0.66
SMAD1-201ENST00000302085 PRAF2O60831 178 aa19.15■□□□□ 0.66
SMAD1-201ENST00000302085 SMPD2O60906 423 aa19.15■□□□□ 0.66
SMAD1-201ENST00000302085 ZNF780AO75290 641 aaPredicted RBP19.15■□□□□ 0.66
SMAD1-201ENST00000302085 IL2RAP01589 272 aa19.15■□□□□ 0.66
SMAD1-201ENST00000302085 AMY2AP04746 511 aa19.15■□□□□ 0.66
SMAD1-201ENST00000302085 SFTPBP07988 381 aa19.15■□□□□ 0.66
SMAD1-201ENST00000302085 GABRR1P24046 479 aa19.15■□□□□ 0.66
SMAD1-201ENST00000302085 TDGF1P3P51864 188 aa19.15■□□□□ 0.66
SMAD1-201ENST00000302085 SIGIRRQ6IA17 410 aa19.15■□□□□ 0.66
SMAD1-201ENST00000302085 BHLHE23Q8NDY6 225 aa19.15■□□□□ 0.66
SMAD1-201ENST00000302085 OCSTAMPQ9BR26 566 aa19.15■□□□□ 0.66
SMAD1-201ENST00000302085 RAXQ9Y2V3 346 aa19.15■□□□□ 0.66
SMAD1-201ENST00000302085 J3QW42 95 aa19.14■□□□□ 0.65
SMAD1-201ENST00000302085 DLL1O00548 723 aa19.14■□□□□ 0.65
SMAD1-201ENST00000302085 IGKV3-15P01624 115 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms