RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 TRAPPC2LH3BP13 241 aa11.79□□□□□ -0.52
CASC4-201ENST00000299957 DHHO43323 396 aa11.79□□□□□ -0.52
CASC4-201ENST00000299957 PIAS2O75928 621 aa11.79□□□□□ -0.52
CASC4-201ENST00000299957 AQP8O94778 261 aa11.79□□□□□ -0.52
CASC4-201ENST00000299957 BPNT1O95861 308 aa11.79□□□□□ -0.52
CASC4-201ENST00000299957 TTRP02766 147 aa11.79□□□□□ -0.52
CASC4-201ENST00000299957 SSR4P51571 173 aa11.79□□□□□ -0.52
CASC4-201ENST00000299957 LIMK1P53667 647 aa11.79□□□□□ -0.52
CASC4-201ENST00000299957 CNN3Q15417 329 aaKnown RBP11.79□□□□□ -0.52
CASC4-201ENST00000299957 OR6S1Q8NH40 331 aa11.79□□□□□ -0.52
CASC4-201ENST00000299957 CLCC1Q96S66 551 aa11.79□□□□□ -0.52
CASC4-201ENST00000299957 NELFAQ9H3P2 528 aa11.79□□□□□ -0.52
CASC4-201ENST00000299957 WNT16Q9UBV4 365 aa11.79□□□□□ -0.52
CASC4-201ENST00000299957 PCOLCE2Q9UKZ9 415 aa11.79□□□□□ -0.52
CASC4-201ENST00000299957 RAB19A4D1S5 217 aa11.78□□□□□ -0.52
CASC4-201ENST00000299957 GDF9O60383 454 aa11.78□□□□□ -0.52
CASC4-201ENST00000299957 CDC14BO60729 498 aa11.78□□□□□ -0.52
CASC4-201ENST00000299957 B3GALNT1O75752 331 aa11.78□□□□□ -0.52
CASC4-201ENST00000299957 TUSC2O75896 110 aa11.78□□□□□ -0.52
CASC4-201ENST00000299957 DUS4LO95620 317 aaKnown RBP11.78□□□□□ -0.52
CASC4-201ENST00000299957 FAM157BP0CG42 384 aa11.78□□□□□ -0.52
CASC4-201ENST00000299957 TMEM33P57088 247 aa11.78□□□□□ -0.52
CASC4-201ENST00000299957 RPL23AP62750 156 aaKnown RBP11.78□□□□□ -0.52
CASC4-201ENST00000299957 FZD5Q13467 585 aa11.78□□□□□ -0.52
CASC4-201ENST00000299957 ZNF684Q5T5D7 378 aa11.78□□□□□ -0.52
CASC4-201ENST00000299957 ABHD17BQ5VST6 288 aa11.78□□□□□ -0.52
CASC4-201ENST00000299957 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.78□□□□□ -0.52
CASC4-201ENST00000299957 RTN4RL2Q86UN3 420 aa11.78□□□□□ -0.52
CASC4-201ENST00000299957 RNF150Q9ULK6 438 aa11.78□□□□□ -0.52
CASC4-201ENST00000299957 IFNA17P01571 189 aa11.78□□□□□ -0.52
CASC4-201ENST00000299957 RPS4Y1P22090 263 aaKnown RBP11.78□□□□□ -0.52
CASC4-201ENST00000299957 CHATP28329 748 aa11.78□□□□□ -0.52
CASC4-201ENST00000299957 NKX2-1P43699 371 aaPredicted RBP11.78□□□□□ -0.52
CASC4-201ENST00000299957 ARL6IP1Q15041 203 aa11.78□□□□□ -0.52
CASC4-201ENST00000299957 EIF2S3LQ2VIR3 472 aaKnown RBP11.78□□□□□ -0.52
CASC4-201ENST00000299957 OR2A2Q6IF42 318 aa11.78□□□□□ -0.52
CASC4-201ENST00000299957 RPUSD3Q6P087 351 aaKnown RBP11.78□□□□□ -0.52
CASC4-201ENST00000299957 ST8SIA1Q92185 356 aa11.78□□□□□ -0.52
CASC4-201ENST00000299957 MRPL24Q96A35 216 aaKnown RBP11.78□□□□□ -0.52
CASC4-201ENST00000299957 MFRPQ9BY79 579 aa11.78□□□□□ -0.52
CASC4-201ENST00000299957 HEXA-AS1Q9H8Q6 139 aa11.78□□□□□ -0.52
CASC4-201ENST00000299957 NPDC1Q9NQX5 325 aaPredicted RBP11.78□□□□□ -0.52
CASC4-201ENST00000299957 PLCE1Q9P212 2302 aa11.78□□□□□ -0.52
CASC4-201ENST00000299957 COL6A6A6NMZ7 2263 aa11.78□□□□□ -0.52
CASC4-201ENST00000299957 NRASP01111 189 aa11.78□□□□□ -0.52
CASC4-201ENST00000299957 CRYBA1P05813 215 aa11.78□□□□□ -0.52
CASC4-201ENST00000299957 OR5AC1P0C628 307 aa11.78□□□□□ -0.52
CASC4-201ENST00000299957 SPP1P10451 314 aa11.78□□□□□ -0.52
CASC4-201ENST00000299957 NPBWR1P48145 328 aa11.78□□□□□ -0.52
CASC4-201ENST00000299957 CCL7P80098 99 aa11.78□□□□□ -0.52
CASC4-201ENST00000299957 CEACAM16Q2WEN9 425 aa11.78□□□□□ -0.52
CASC4-201ENST00000299957 ACTBL2Q562R1 376 aa11.78□□□□□ -0.52
CASC4-201ENST00000299957 WIPI1Q5MNZ9 446 aaPredicted RBP11.78□□□□□ -0.52
CASC4-201ENST00000299957 TIMP4Q99727 224 aa11.78□□□□□ -0.52
CASC4-201ENST00000299957 RAB33BQ9H082 229 aa11.78□□□□□ -0.52
CASC4-201ENST00000299957 PLK3Q9H4B4 646 aa11.78□□□□□ -0.52
CASC4-201ENST00000299957 FAM24AA6NFZ4 105 aa11.77□□□□□ -0.52
CASC4-201ENST00000299957 HOXD4P09016 255 aaPredicted RBP11.77□□□□□ -0.52
CASC4-201ENST00000299957 NCMAPQ5T1S8 102 aa11.77□□□□□ -0.52
CASC4-201ENST00000299957 TMEM164Q5U3C3 297 aa11.77□□□□□ -0.52
CASC4-201ENST00000299957 PTCRAQ6ISU1 281 aaPredicted RBP11.77□□□□□ -0.52
CASC4-201ENST00000299957 HSD17B13Q7Z5P4 300 aaPredicted RBP11.77□□□□□ -0.52
CASC4-201ENST00000299957 OR5AP2Q8NGF4 316 aa11.77□□□□□ -0.52
CASC4-201ENST00000299957 EMG1Q92979 244 aaKnown RBP11.77□□□□□ -0.52
CASC4-201ENST00000299957 KIRREL1Q96J84 757 aa11.77□□□□□ -0.52
CASC4-201ENST00000299957 UQCC1Q9NVA1 299 aa11.77□□□□□ -0.52
CASC4-201ENST00000299957 PPP1R3CQ9UQK1 317 aa11.77□□□□□ -0.52
CASC4-201ENST00000299957 IGHV1OR15-9A0A0B4J2B8 117 aa11.77□□□□□ -0.52
CASC4-201ENST00000299957 RAMP1O60894 148 aa11.77□□□□□ -0.52
CASC4-201ENST00000299957 GLB1P16278 677 aa11.77□□□□□ -0.52
CASC4-201ENST00000299957 HAAOP46952 286 aa11.77□□□□□ -0.52
CASC4-201ENST00000299957 PJVKQ0ZLH3 352 aa11.77□□□□□ -0.52
CASC4-201ENST00000299957 GGNBP1Q5YKI7 109 aa11.77□□□□□ -0.52
CASC4-201ENST00000299957 DRAM2Q6UX65 266 aa11.77□□□□□ -0.52
CASC4-201ENST00000299957 CNEP1R1Q8N9A8 125 aa11.77□□□□□ -0.52
CASC4-201ENST00000299957 MRPS24Q96EL2 167 aaKnown RBP11.77□□□□□ -0.52
CASC4-201ENST00000299957 AKIRIN1Q9H9L7 192 aaPredicted RBP11.77□□□□□ -0.52
CASC4-201ENST00000299957 NECAP2Q9NVZ3 263 aa11.77□□□□□ -0.52
CASC4-201ENST00000299957 NOSIPQ9Y314 301 aaKnown RBP11.77□□□□□ -0.52
CASC4-201ENST00000299957 NLRC5Q86WI3 1866 aa11.77□□□□□ -0.53
CASC4-201ENST00000299957 C5orf49A4QMS7 147 aa11.77□□□□□ -0.53
CASC4-201ENST00000299957 OR2C1O95371 312 aa11.77□□□□□ -0.53
CASC4-201ENST00000299957 GP1BAP07359 652 aa11.77□□□□□ -0.53
CASC4-201ENST00000299957 GRPP07492 148 aa11.77□□□□□ -0.53
CASC4-201ENST00000299957 UNQ9370/PRO34162Q6UXP9 181 aa11.77□□□□□ -0.53
CASC4-201ENST00000299957 ETV3LQ6ZN32 361 aa11.77□□□□□ -0.53
CASC4-201ENST00000299957 GLRX5Q86SX6 157 aa11.77□□□□□ -0.53
CASC4-201ENST00000299957 LGI3Q8N145 548 aa11.77□□□□□ -0.53
CASC4-201ENST00000299957 ZNF808Q8N4W9 903 aaPredicted RBP11.77□□□□□ -0.53
CASC4-201ENST00000299957 NOXO1Q8NFA2 376 aa11.77□□□□□ -0.53
CASC4-201ENST00000299957 CMTM3Q96MX0 182 aa11.77□□□□□ -0.53
CASC4-201ENST00000299957 PRRX2Q99811 253 aa11.77□□□□□ -0.53
CASC4-201ENST00000299957 SARGQ9BW04 601 aa11.77□□□□□ -0.53
CASC4-201ENST00000299957 LANCL2Q9NS86 450 aa11.77□□□□□ -0.53
CASC4-201ENST00000299957 UFSP2Q9NUQ7 469 aa11.77□□□□□ -0.53
CASC4-201ENST00000299957 ABI3Q9P2A4 366 aa11.77□□□□□ -0.53
CASC4-201ENST00000299957 AK3Q9UIJ7 227 aa11.77□□□□□ -0.53
CASC4-201ENST00000299957 TRAPPC2LQ9UL33 140 aa11.77□□□□□ -0.53
CASC4-201ENST00000299957 PRELID3BQ9Y3B1 194 aa11.77□□□□□ -0.53
CASC4-201ENST00000299957 MFSD2BA6NFX1 497 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms