RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 ATG5Q9H1Y0 275 aa13.45□□□□□ -0.26
LSM6-201ENST00000296581 RANBP3Q9H6Z4 567 aaPredicted RBP13.45□□□□□ -0.26
LSM6-201ENST00000296581 AUNIPQ9H7T9 357 aa13.45□□□□□ -0.26
LSM6-201ENST00000296581 TUBD1Q9UJT1 453 aa13.45□□□□□ -0.26
LSM6-201ENST00000296581 MRPS28Q9Y2Q9 187 aaKnown RBP13.45□□□□□ -0.26
LSM6-201ENST00000296581 A0A0A6YYH2 397 aa13.44□□□□□ -0.26
LSM6-201ENST00000296581 A6NJ64 397 aa13.44□□□□□ -0.26
LSM6-201ENST00000296581 SSX5O60225 188 aa13.44□□□□□ -0.26
LSM6-201ENST00000296581 FAM87AP0C7U9 286 aa13.44□□□□□ -0.26
LSM6-201ENST00000296581 UNC119Q13432 240 aa13.44□□□□□ -0.26
LSM6-201ENST00000296581 KISS1Q15726 138 aa13.44□□□□□ -0.26
LSM6-201ENST00000296581 AWAT2Q6E213 333 aa13.44□□□□□ -0.26
LSM6-201ENST00000296581 OR10K2Q6IF99 312 aa13.44□□□□□ -0.26
LSM6-201ENST00000296581 SPSB1Q96BD6 273 aa13.44□□□□□ -0.26
LSM6-201ENST00000296581 MS4A3Q96HJ5 214 aa13.44□□□□□ -0.26
LSM6-201ENST00000296581 RADILQ96JH8 1075 aa13.44□□□□□ -0.26
LSM6-201ENST00000296581 REPIN1Q9BWE0 567 aaKnown RBP13.44□□□□□ -0.26
LSM6-201ENST00000296581 C1QTNF6Q9BXI9 259 aa13.44□□□□□ -0.26
LSM6-201ENST00000296581 ING4Q9UNL4 249 aa13.44□□□□□ -0.26
LSM6-201ENST00000296581 MYO7BQ6PIF6 2116 aa13.44□□□□□ -0.26
LSM6-201ENST00000296581 TMEM14DPA8MWL7 114 aa13.44□□□□□ -0.26
LSM6-201ENST00000296581 FAM157BP0CG42 384 aa13.44□□□□□ -0.26
LSM6-201ENST00000296581 ZNF14P17017 642 aaPredicted RBP13.44□□□□□ -0.26
LSM6-201ENST00000296581 ALDH3B1P43353 468 aa13.44□□□□□ -0.26
LSM6-201ENST00000296581 OR3A4PP47883 348 aa13.44□□□□□ -0.26
LSM6-201ENST00000296581 UBE2NP61088 152 aaKnown RBP13.44□□□□□ -0.26
LSM6-201ENST00000296581 PMPCAQ10713 525 aa13.44□□□□□ -0.26
LSM6-201ENST00000296581 RNASE12Q5GAN4 147 aaKnown RBP13.44□□□□□ -0.26
LSM6-201ENST00000296581 OVCH2Q7RTZ1 564 aa13.44□□□□□ -0.26
LSM6-201ENST00000296581 OR2W3Q7Z3T1 314 aa13.44□□□□□ -0.26
LSM6-201ENST00000296581 OR52I2Q8NH67 350 aa13.44□□□□□ -0.26
LSM6-201ENST00000296581 GCDHQ92947 438 aaPredicted RBP13.44□□□□□ -0.26
LSM6-201ENST00000296581 PHF21AQ96BD5 680 aa13.44□□□□□ -0.26
LSM6-201ENST00000296581 UPRTQ96BW1 309 aa13.44□□□□□ -0.26
LSM6-201ENST00000296581 REG4Q9BYZ8 158 aa13.44□□□□□ -0.26
LSM6-201ENST00000296581 GPR173Q9NS66 373 aa13.44□□□□□ -0.26
LSM6-201ENST00000296581 ORC5O43913 435 aa13.43□□□□□ -0.26
LSM6-201ENST00000296581 UBBP0CG47 229 aa13.43□□□□□ -0.26
LSM6-201ENST00000296581 ID4P47928 161 aa13.43□□□□□ -0.26
LSM6-201ENST00000296581 GLIPR1L1Q6UWM5 242 aa13.43□□□□□ -0.26
LSM6-201ENST00000296581 KRT74Q7RTS7 529 aa13.43□□□□□ -0.26
LSM6-201ENST00000296581 TOMM5Q8N4H5 51 aa13.43□□□□□ -0.26
LSM6-201ENST00000296581 RPRMLQ8N4K4 120 aa13.43□□□□□ -0.26
LSM6-201ENST00000296581 ZNF610Q8N9Z0 462 aa13.43□□□□□ -0.26
LSM6-201ENST00000296581 NAXEQ8NCW5 288 aa13.43□□□□□ -0.26
LSM6-201ENST00000296581 SLC30A7Q8NEW0 376 aa13.43□□□□□ -0.26
LSM6-201ENST00000296581 FCAMRQ8WWV6 532 aa13.43□□□□□ -0.26
LSM6-201ENST00000296581 GPER1Q99527 375 aa13.43□□□□□ -0.26
LSM6-201ENST00000296581 CLEC4MQ9H2X3 399 aaPredicted RBP13.43□□□□□ -0.26
LSM6-201ENST00000296581 MYEF2Q9P2K5 600 aaKnown RBP13.43□□□□□ -0.26
LSM6-201ENST00000296581 TRAV18A0A075B6X5 111 aa13.43□□□□□ -0.26
LSM6-201ENST00000296581 MPC2O95563 127 aa13.43□□□□□ -0.26
LSM6-201ENST00000296581 IL2RAP01589 272 aa13.43□□□□□ -0.26
LSM6-201ENST00000296581 CEACAM8P31997 349 aaPredicted RBP13.43□□□□□ -0.26
LSM6-201ENST00000296581 GDNFP39905 211 aa13.43□□□□□ -0.26
LSM6-201ENST00000296581 WNT5AP41221 380 aa13.43□□□□□ -0.26
LSM6-201ENST00000296581 MEOX2P50222 304 aa13.43□□□□□ -0.26
LSM6-201ENST00000296581 PRSS12P56730 875 aa13.43□□□□□ -0.26
LSM6-201ENST00000296581 MALLQ13021 153 aa13.43□□□□□ -0.26
LSM6-201ENST00000296581 KLF9Q13886 244 aaPredicted RBP13.43□□□□□ -0.26
LSM6-201ENST00000296581 GK2Q14410 553 aaPredicted RBP13.43□□□□□ -0.26
LSM6-201ENST00000296581 GPR176Q14439 515 aa13.43□□□□□ -0.26
LSM6-201ENST00000296581 P2RY6Q15077 328 aa13.43□□□□□ -0.26
LSM6-201ENST00000296581 CNN3Q15417 329 aaKnown RBP13.43□□□□□ -0.26
LSM6-201ENST00000296581 MTFR2Q6P444 385 aa13.43□□□□□ -0.26
LSM6-201ENST00000296581 PNLDC1Q8NA58 520 aaKnown RBP13.43□□□□□ -0.26
LSM6-201ENST00000296581 DUSP18Q8NEJ0 188 aa13.43□□□□□ -0.26
LSM6-201ENST00000296581 NPRL2Q8WTW4 380 aa13.43□□□□□ -0.26
LSM6-201ENST00000296581 OPN3Q9H1Y3 402 aaPredicted RBP13.43□□□□□ -0.26
LSM6-201ENST00000296581 SDHAF2Q9NX18 166 aa13.43□□□□□ -0.26
LSM6-201ENST00000296581 GHRLQ9UBU3 117 aa13.43□□□□□ -0.26
LSM6-201ENST00000296581 STARD10Q9Y365 291 aa13.43□□□□□ -0.26
LSM6-201ENST00000296581 SPENQ96T58 3664 aaKnown RBP13.43□□□□□ -0.26
LSM6-201ENST00000296581 ZNF816-ZNF321PA0A0X1KG74 233 aa13.42□□□□□ -0.26
LSM6-201ENST00000296581 MFSD2BA6NFX1 497 aa13.42□□□□□ -0.26
LSM6-201ENST00000296581 ABCD4O14678 606 aa13.42□□□□□ -0.26
LSM6-201ENST00000296581 NGFP01138 241 aa13.42□□□□□ -0.26
LSM6-201ENST00000296581 PTHLHP12272 177 aa13.42□□□□□ -0.26
LSM6-201ENST00000296581 SRP9P49458 86 aaKnown RBP13.42□□□□□ -0.26
LSM6-201ENST00000296581 ARHGDIBP52566 201 aa13.42□□□□□ -0.26
LSM6-201ENST00000296581 DMRTC1Q5HYR2 192 aa13.42□□□□□ -0.26
LSM6-201ENST00000296581 C17orf78Q8N4C9 275 aa13.42□□□□□ -0.26
LSM6-201ENST00000296581 WDR31Q8NA23 367 aa13.42□□□□□ -0.26
LSM6-201ENST00000296581 PIGTQ969N2 578 aa13.42□□□□□ -0.26
LSM6-201ENST00000296581 GSX2Q9BZM3 304 aa13.42□□□□□ -0.26
LSM6-201ENST00000296581 OPA3Q9H6K4 179 aa13.42□□□□□ -0.26
LSM6-201ENST00000296581 IGF2RP11717 2491 aa13.42□□□□□ -0.26
LSM6-201ENST00000296581 PIEZO1Q92508 2521 aa13.42□□□□□ -0.26
LSM6-201ENST00000296581 METTL21EPA6NDL7 271 aa13.42□□□□□ -0.26
LSM6-201ENST00000296581 J3QW42 95 aa13.42□□□□□ -0.26
LSM6-201ENST00000296581 NDUFS6O75380 124 aaKnown RBP13.42□□□□□ -0.26
LSM6-201ENST00000296581 NRASP01111 189 aa13.42□□□□□ -0.26
LSM6-201ENST00000296581 PTGFRP43088 359 aa13.42□□□□□ -0.26
LSM6-201ENST00000296581 DYRK1AQ13627 763 aa13.42□□□□□ -0.26
LSM6-201ENST00000296581 TSC22D1Q15714 1073 aa13.42□□□□□ -0.26
LSM6-201ENST00000296581 TBC1D28Q2M2D7 210 aa13.42□□□□□ -0.26
LSM6-201ENST00000296581 RAB12Q6IQ22 244 aa13.42□□□□□ -0.26
LSM6-201ENST00000296581 BEND4Q6ZU67 534 aa13.42□□□□□ -0.26
LSM6-201ENST00000296581 ZNF101Q8IZC7 436 aa13.42□□□□□ -0.26
LSM6-201ENST00000296581 SNRNP40Q96DI7 357 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms