RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 KLK13Q9UKR3 277 aa10.61□□□□□ -0.71
SYNGAP1-201ENST00000293748 LIMS3P0CW19 117 aa10.6□□□□□ -0.71
SYNGAP1-201ENST00000293748 LIMS4P0CW20 117 aa10.6□□□□□ -0.71
SYNGAP1-201ENST00000293748 SUB1P53999 127 aaKnown RBP eCLIP10.6□□□□□ -0.71
SYNGAP1-201ENST00000293748 TPPP2P59282 170 aa10.6□□□□□ -0.71
SYNGAP1-201ENST00000293748 SNRPEP62304 92 aaKnown RBP10.6□□□□□ -0.71
SYNGAP1-201ENST00000293748 PINX1Q96BK5 328 aaKnown RBP10.6□□□□□ -0.71
SYNGAP1-201ENST00000293748 SLC35E1Q96K37 410 aa10.6□□□□□ -0.71
SYNGAP1-201ENST00000293748 POLDIP2Q9Y2S7 368 aa10.6□□□□□ -0.71
SYNGAP1-201ENST00000293748 GSK3AP49840 483 aa10.6□□□□□ -0.71
SYNGAP1-201ENST00000293748 HMGCLL1Q8TB92 370 aa10.6□□□□□ -0.71
SYNGAP1-201ENST00000293748 MTCH1Q9NZJ7 389 aa10.6□□□□□ -0.71
SYNGAP1-201ENST00000293748 ZNF320A2RRD8 509 aa10.6□□□□□ -0.71
SYNGAP1-201ENST00000293748 DSCR3O14972 297 aa10.6□□□□□ -0.71
SYNGAP1-201ENST00000293748 KLK10O43240 276 aa10.6□□□□□ -0.71
SYNGAP1-201ENST00000293748 QDPRP09417 244 aa10.6□□□□□ -0.71
SYNGAP1-201ENST00000293748 PLA1AQ53H76 456 aa10.6□□□□□ -0.71
SYNGAP1-201ENST00000293748 GPR32P1Q8NGA4 272 aa10.6□□□□□ -0.71
SYNGAP1-201ENST00000293748 OR10D4PQ8NGN7 298 aa10.6□□□□□ -0.71
SYNGAP1-201ENST00000293748 SCMH1Q96GD3 660 aa10.6□□□□□ -0.71
SYNGAP1-201ENST00000293748 SHARPINQ9H0F6 387 aa10.6□□□□□ -0.71
SYNGAP1-201ENST00000293748 FAM234AQ9H0X4 552 aa10.6□□□□□ -0.71
SYNGAP1-201ENST00000293748 DYNLRB1Q9NP97 96 aa10.6□□□□□ -0.71
SYNGAP1-201ENST00000293748 FANCMQ8IYD8 2048 aa10.6□□□□□ -0.71
SYNGAP1-201ENST00000293748 CLDN34H7C241 214 aa10.6□□□□□ -0.71
SYNGAP1-201ENST00000293748 EFSO43281 561 aa10.6□□□□□ -0.71
SYNGAP1-201ENST00000293748 XRCC2O43543 280 aa10.6□□□□□ -0.71
SYNGAP1-201ENST00000293748 WDR1O75083 606 aa10.6□□□□□ -0.71
SYNGAP1-201ENST00000293748 PNPP00491 289 aa10.6□□□□□ -0.71
SYNGAP1-201ENST00000293748 GUSBP08236 651 aa10.6□□□□□ -0.71
SYNGAP1-201ENST00000293748 IL3RAP26951 378 aa10.6□□□□□ -0.71
SYNGAP1-201ENST00000293748 SLC6A1P30531 599 aa10.6□□□□□ -0.71
SYNGAP1-201ENST00000293748 CD300CQ08708 224 aa10.6□□□□□ -0.71
SYNGAP1-201ENST00000293748 ZNF628Q5EBL2 1059 aa10.6□□□□□ -0.71
SYNGAP1-201ENST00000293748 TMPRSS11FQ6ZWK6 438 aa10.6□□□□□ -0.71
SYNGAP1-201ENST00000293748 SLC39A7Q92504 469 aa10.6□□□□□ -0.71
SYNGAP1-201ENST00000293748 RTL8AQ9BWD3 113 aa10.6□□□□□ -0.71
SYNGAP1-201ENST00000293748 PBOV1Q9GZY1 135 aa10.6□□□□□ -0.71
SYNGAP1-201ENST00000293748 RAB18Q9NP72 206 aa10.6□□□□□ -0.71
SYNGAP1-201ENST00000293748 POMT1Q9Y6A1 747 aa10.6□□□□□ -0.71
SYNGAP1-201ENST00000293748 TDRD6O60522 2096 aaKnown RBP10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 A0A1B0GX78 115 aa10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 CORO6Q6QEF8 472 aa10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 STPG2Q8N412 459 aa10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 NTNG2Q96CW9 530 aa10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 CNRIP1Q96F85 164 aaPredicted RBP10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 TPPP3Q9BW30 176 aa10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 SLCO1C1Q9NYB5 712 aa10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 ASCC3Q8N3C0 2202 aaKnown RBP10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 ZNF816-ZNF321PA0A0X1KG74 233 aa10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 SEC14L6B5MCN3 397 aa10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 CHEK1O14757 476 aa10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 TBX19O60806 448 aa10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 ALOX12BO75342 701 aa10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 CTRB1P17538 263 aa10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 SPINK2P20155 84 aa10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 FPR2P25090 351 aa10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 RPS27P42677 84 aaKnown RBP10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 HNRNPA3P51991 378 aaKnown RBP10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 CDCP2Q5VXM1 449 aa10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 CTRB2Q6GPI1 263 aa10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 CD300LDQ6UXZ3 194 aa10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 ZNF429Q86V71 674 aa10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 SFTPA2Q8IWL1 248 aa10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 ZNF321PQ8N8H1 164 aa10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 UBAC2Q8NBM4 344 aa10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 TTC9Q92623 222 aa10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 SPACA5Q96QH8 159 aa10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 OR8B4Q96RC9 309 aa10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 TINAGL1Q9GZM7 467 aaPredicted RBP10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 SLC6A13Q9NSD5 602 aa10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 LYRM2Q9NU23 88 aaPredicted RBP10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 YTHDF2Q9Y5A9 579 aaKnown RBP10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 KNTC1P50748 2209 aa10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 RP1L1Q8IWN7 2480 aaPredicted RBP10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 CNOT1A5YKK6 2376 aaKnown RBP10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 CT45A10P0DMU9 189 aa10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 HOXB3P14651 431 aaPredicted RBP10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 ST6GAL1P15907 406 aa10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 MIDNQ504T8 468 aa10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 D2HGDHQ8N465 521 aa10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 CISD2Q8N5K1 135 aaKnown RBP10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 UTP23Q9BRU9 249 aaKnown RBP10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 MRPL22Q9NWU5 206 aaKnown RBP10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 TIMM10BQ9Y5J6 103 aa10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 WSB1Q9Y6I7 421 aa10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 CEP192Q8TEP8 1941 aa10.59□□□□□ -0.71
SYNGAP1-201ENST00000293748 FIGNL2A6NMB9 653 aa10.58□□□□□ -0.72
SYNGAP1-201ENST00000293748 MPGP29372 298 aa10.58□□□□□ -0.72
SYNGAP1-201ENST00000293748 AKR1C3P42330 323 aa10.58□□□□□ -0.72
SYNGAP1-201ENST00000293748 EDDM3BP56851 147 aa10.58□□□□□ -0.72
SYNGAP1-201ENST00000293748 GUCA2AQ02747 115 aa10.58□□□□□ -0.72
SYNGAP1-201ENST00000293748 DHRS2Q13268 280 aa10.58□□□□□ -0.72
SYNGAP1-201ENST00000293748 SLC24A4Q8NFF2 622 aa10.58□□□□□ -0.72
SYNGAP1-201ENST00000293748 IP6K3Q96PC2 410 aa10.58□□□□□ -0.72
SYNGAP1-201ENST00000293748 CHST6Q9GZX3 395 aa10.58□□□□□ -0.72
SYNGAP1-201ENST00000293748 CALHM2Q9HA72 323 aa10.58□□□□□ -0.72
SYNGAP1-201ENST00000293748 B9D1Q9UPM9 204 aa10.58□□□□□ -0.72
SYNGAP1-201ENST00000293748 CBY3A6NI87 242 aa10.58□□□□□ -0.72
SYNGAP1-201ENST00000293748 RAC1P63000 192 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms