RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 MT-ATP6P00846 226 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 HOXD4P09016 255 aaPredicted RBP10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 TBPP20226 339 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 MPGP29372 298 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 ERVK-16P61578 105 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 PKIAP61925 76 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 OTPQ5XKR4 325 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 MRGPREQ86SM8 312 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 KLHDC1Q8N7A1 406 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 ZNF485Q8NCK3 441 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 GPR32P1Q8NGA4 272 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 PIGTQ969N2 578 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 PACRGQ96M98 296 aaPredicted RBP10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 ZDHHC11Q9H8X9 412 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 ING1Q9UK53 422 aaPredicted RBP10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 ATG2BQ96BY7 2078 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 XKRY2A2RUG3 117 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 C17orf112F2Z3M2 114 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 ANGPTL7O43827 346 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 MMP7P09237 267 aaPredicted RBP10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 ACKR1Q16570 336 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 PLCXD3Q63HM9 321 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 ANKRD16Q6P6B7 361 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 C10orf111Q8N326 155 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 ZNF501Q96CX3 271 aaPredicted RBP10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 MRGPRX4Q96LA9 322 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 ZFC3H1O60293 1989 aaKnown RBP10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 SLC17A2O00624 439 aa10.16□□□□□ -0.78
NPC1L1-201ENST00000289547 LANCL3Q6ZV70 420 aa10.16□□□□□ -0.78
NPC1L1-201ENST00000289547 MOB3CQ70IA8 216 aa10.16□□□□□ -0.78
NPC1L1-201ENST00000289547 VN1R4Q7Z5H5 301 aa10.16□□□□□ -0.78
NPC1L1-201ENST00000289547 OR2L13Q8N349 312 aa10.16□□□□□ -0.78
NPC1L1-201ENST00000289547 SAT2Q96F10 170 aaPredicted RBP10.16□□□□□ -0.78
NPC1L1-201ENST00000289547 MS4A10Q96PG2 267 aa10.16□□□□□ -0.78
NPC1L1-201ENST00000289547 JAM3Q9BX67 310 aa10.16□□□□□ -0.78
NPC1L1-201ENST00000289547 TRAV34A0A0B4J273 112 aa10.16□□□□□ -0.78
NPC1L1-201ENST00000289547 AQP7O14520 342 aa10.16□□□□□ -0.78
NPC1L1-201ENST00000289547 TMEM127O75204 238 aa10.16□□□□□ -0.78
NPC1L1-201ENST00000289547 YIF1AO95070 293 aa10.16□□□□□ -0.78
NPC1L1-201ENST00000289547 HAAOP46952 286 aa10.16□□□□□ -0.78
NPC1L1-201ENST00000289547 Q5BKY6 102 aa10.16□□□□□ -0.78
NPC1L1-201ENST00000289547 ZNF600Q6ZNG1 722 aa10.16□□□□□ -0.78
NPC1L1-201ENST00000289547 OR11H4Q8NGC9 324 aa10.16□□□□□ -0.78
NPC1L1-201ENST00000289547 REEP6Q96HR9 211 aa10.16□□□□□ -0.78
NPC1L1-201ENST00000289547 NKX3-1Q99801 234 aaPredicted RBP10.16□□□□□ -0.78
NPC1L1-201ENST00000289547 CA10Q9NS85 328 aa10.16□□□□□ -0.78
NPC1L1-201ENST00000289547 COA3Q9Y2R0 106 aaPredicted RBP10.16□□□□□ -0.78
NPC1L1-201ENST00000289547 ZNF816-ZNF321PA0A0X1KG74 233 aa10.16□□□□□ -0.78
NPC1L1-201ENST00000289547 MFSD2BA6NFX1 497 aa10.16□□□□□ -0.78
NPC1L1-201ENST00000289547 RNF212BA8MTL3 300 aa10.16□□□□□ -0.78
NPC1L1-201ENST00000289547 RPP30P78346 268 aaKnown RBP10.16□□□□□ -0.78
NPC1L1-201ENST00000289547 DCAF10Q5QP82 559 aa10.16□□□□□ -0.78
NPC1L1-201ENST00000289547 RPL7L1Q6DKI1 246 aaKnown RBP10.16□□□□□ -0.78
NPC1L1-201ENST00000289547 SLC16A14Q7RTX9 510 aa10.16□□□□□ -0.78
NPC1L1-201ENST00000289547 MRPL21Q7Z2W9 205 aaKnown RBP10.16□□□□□ -0.78
NPC1L1-201ENST00000289547 ZNF321PQ8N8H1 164 aa10.16□□□□□ -0.78
NPC1L1-201ENST00000289547 MAGT1Q9H0U3 335 aa10.16□□□□□ -0.78
NPC1L1-201ENST00000289547 RASL12Q9NYN1 266 aa10.16□□□□□ -0.78
NPC1L1-201ENST00000289547 A0A1W2PPE2 198 aa10.16□□□□□ -0.78
NPC1L1-201ENST00000289547 ICOSLGO75144 302 aa10.16□□□□□ -0.78
NPC1L1-201ENST00000289547 B2MP61769 119 aa10.16□□□□□ -0.78
NPC1L1-201ENST00000289547 RAB32Q13637 225 aa10.16□□□□□ -0.78
NPC1L1-201ENST00000289547 ZIC1Q15915 447 aa10.16□□□□□ -0.78
NPC1L1-201ENST00000289547 TMPRSS7Q7RTY8 843 aa10.16□□□□□ -0.78
NPC1L1-201ENST00000289547 CPT1CQ8TCG5 803 aa10.16□□□□□ -0.78
NPC1L1-201ENST00000289547 RP1P56715 2156 aa10.16□□□□□ -0.78
NPC1L1-201ENST00000289547 HSPB6O14558 160 aa10.15□□□□□ -0.78
NPC1L1-201ENST00000289547 SSSCA1O60232 199 aa10.15□□□□□ -0.78
NPC1L1-201ENST00000289547 TOX4O94842 621 aa10.15□□□□□ -0.78
NPC1L1-201ENST00000289547 ECH1Q13011 328 aa10.15□□□□□ -0.78
NPC1L1-201ENST00000289547 MLC1Q15049 377 aa10.15□□□□□ -0.78
NPC1L1-201ENST00000289547 NPSR1Q6W5P4 371 aa10.15□□□□□ -0.78
NPC1L1-201ENST00000289547 WDR88Q6ZMY6 472 aa10.15□□□□□ -0.78
NPC1L1-201ENST00000289547 OR14J1Q9UGF5 321 aa10.15□□□□□ -0.78
NPC1L1-201ENST00000289547 AMDHD2Q9Y303 409 aa10.15□□□□□ -0.78
NPC1L1-201ENST00000289547 ELOA3CA0A087WX78 387 aaPredicted RBP10.15□□□□□ -0.78
NPC1L1-201ENST00000289547 GALNSP34059 522 aa10.15□□□□□ -0.78
NPC1L1-201ENST00000289547 C1orf140Q5VVS0 124 aa10.15□□□□□ -0.78
NPC1L1-201ENST00000289547 DAZAP1Q96EP5 407 aaKnown RBP10.15□□□□□ -0.78
NPC1L1-201ENST00000289547 MYOTQ9UBF9 498 aa10.15□□□□□ -0.78
NPC1L1-201ENST00000289547 SERTM1A2A2V5 107 aa10.15□□□□□ -0.78
NPC1L1-201ENST00000289547 C2orf72A6NCS6 295 aa10.15□□□□□ -0.78
NPC1L1-201ENST00000289547 SLC22A20A6NK97 555 aa10.15□□□□□ -0.78
NPC1L1-201ENST00000289547 EIF3GO75821 320 aaKnown RBP eCLIP10.15□□□□□ -0.78
NPC1L1-201ENST00000289547 ZFPL1O95159 310 aa10.15□□□□□ -0.78
NPC1L1-201ENST00000289547 SULT1A1P50225 295 aa10.15□□□□□ -0.78
NPC1L1-201ENST00000289547 BTNL8Q6UX41 500 aa10.15□□□□□ -0.78
NPC1L1-201ENST00000289547 ZNF426Q9BUY5 554 aa10.15□□□□□ -0.78
NPC1L1-201ENST00000289547 GDF9O60383 454 aa10.15□□□□□ -0.79
NPC1L1-201ENST00000289547 TBX19O60806 448 aa10.15□□□□□ -0.79
NPC1L1-201ENST00000289547 OPRM1P35372 400 aa10.15□□□□□ -0.79
NPC1L1-201ENST00000289547 TPPP2P59282 170 aa10.15□□□□□ -0.79
NPC1L1-201ENST00000289547 TMEM268Q5VZI3 342 aa10.15□□□□□ -0.79
NPC1L1-201ENST00000289547 RGS7BPQ6MZT1 257 aaPredicted RBP10.15□□□□□ -0.79
NPC1L1-201ENST00000289547 TMEM104Q8NE00 496 aa10.15□□□□□ -0.79
NPC1L1-201ENST00000289547 OR11G2Q8NGC1 345 aa10.15□□□□□ -0.79
NPC1L1-201ENST00000289547 PSMF1Q92530 271 aa10.15□□□□□ -0.79
NPC1L1-201ENST00000289547 SNX22Q96L94 193 aa10.15□□□□□ -0.79
NPC1L1-201ENST00000289547 FKRPQ9H9S5 495 aa10.15□□□□□ -0.79
NPC1L1-201ENST00000289547 FNDC1Q4ZHG4 1894 aaPredicted RBP10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms