RNA–Protein interactions for RNA: ENST00000289488.6

LRTOMT-201, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best) BASIC

Gene LRTOMT, Length 2,332 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-201ENST00000289488 SHANK1Q9Y566 2161 aa8.49□□□□□ -1.05
LRTOMT-201ENST00000289488 COLCA2A8K830 154 aa8.49□□□□□ -1.05
LRTOMT-201ENST00000289488 PSMD9O00233 223 aa8.49□□□□□ -1.05
LRTOMT-201ENST00000289488 ANXA2P07355 339 aaKnown RBP8.49□□□□□ -1.05
LRTOMT-201ENST00000289488 PTAFRP25105 342 aa8.49□□□□□ -1.05
LRTOMT-201ENST00000289488 CD34P28906 385 aa8.49□□□□□ -1.05
LRTOMT-201ENST00000289488 CDAP32320 146 aa8.49□□□□□ -1.05
LRTOMT-201ENST00000289488 SRSF3P84103 164 aaKnown RBP8.49□□□□□ -1.05
LRTOMT-201ENST00000289488 SMCO1Q147U7 214 aa8.49□□□□□ -1.05
LRTOMT-201ENST00000289488 ABLIM2Q6H8Q1 611 aa8.49□□□□□ -1.05
LRTOMT-201ENST00000289488 IL34Q6ZMJ4 242 aa8.49□□□□□ -1.05
LRTOMT-201ENST00000289488 TUSC5Q8IXB3 177 aa8.49□□□□□ -1.05
LRTOMT-201ENST00000289488 OR4A4PQ8NGN8 299 aa8.49□□□□□ -1.05
LRTOMT-201ENST00000289488 OR1J2Q8NGS2 313 aa8.49□□□□□ -1.05
LRTOMT-201ENST00000289488 SLC25A44Q96H78 314 aaPredicted RBP8.49□□□□□ -1.05
LRTOMT-201ENST00000289488 NAA11Q9BSU3 229 aaPredicted RBP8.49□□□□□ -1.05
LRTOMT-201ENST00000289488 TREM1Q9NP99 234 aa8.49□□□□□ -1.05
LRTOMT-201ENST00000289488 UQCC1Q9NVA1 299 aa8.49□□□□□ -1.05
LRTOMT-201ENST00000289488 VSX1Q9NZR4 365 aaPredicted RBP8.49□□□□□ -1.05
LRTOMT-201ENST00000289488 B9D1Q9UPM9 204 aa8.49□□□□□ -1.05
LRTOMT-201ENST00000289488 COA3Q9Y2R0 106 aaPredicted RBP8.49□□□□□ -1.05
LRTOMT-201ENST00000289488 HIVEP3Q5T1R4 2406 aa8.49□□□□□ -1.05
LRTOMT-201ENST00000289488 IGLV1-36A0A0B4J1U3 117 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 TRBV5-5A0A0J9YX44 114 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 MEIS3P1A6NDR6 274 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 RENP00797 406 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 IGHV2-70P01814 119 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 HLA-DQA2P01906 255 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 PRSS3P35030 304 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 CLRN1P58418 232 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 ACTBP60709 375 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 ACTG1P63261 375 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 ATXN7L3Q14CW9 347 aaPredicted RBP8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 TAF13Q15543 124 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 LRRC37A5PQ49AS3 106 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 SLC35D3Q5M8T2 416 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 GCNT2Q8N0V5 402 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 GABRG1Q8N1C3 465 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 RNF128Q8TEB7 428 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 PPP1R1CQ8WVI7 109 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 DVL3Q92997 716 aaPredicted RBP8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 RNF166Q96A37 237 aaPredicted RBP8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 SNRNP40Q96DI7 357 aaKnown RBP8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 PRRG4Q9BZD6 226 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 PLSCR2Q9NRY7 297 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 LOC102725191A0A1B0GVB3 256 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 ZNF726A6NNF4 738 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 C1orf196B1AJZ1 125 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 F8VVB4 439 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 F8VWA3 439 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 CYTIPO60759 359 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 ZNF432O94892 652 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 VAMP5O95183 116 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 WNT11O96014 354 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 TPT1P13693 172 aaKnown RBP8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 NFYBP25208 207 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 ATP1B3P54709 279 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 TAS2R19P59542 299 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 DHRS2Q13268 280 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 NKAPLQ5M9Q1 402 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 ZNF684Q5T5D7 378 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 TMED4Q7Z7H5 227 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 RPRMLQ8N4K4 120 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 C15orf54Q8N8G6 183 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 INO80EQ8NBZ0 244 aaPredicted RBP8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 OR5AP2Q8NGF4 316 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 OR8S1Q8NH09 359 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 OR6X1Q8NH79 312 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 RNF141Q8WVD5 230 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 PIK3IP1Q96FE7 263 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 ALKBH3Q96Q83 286 aaPredicted RBP8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 NRIP2Q9BQI9 281 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 EGLN1Q9GZT9 426 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 PRORYQ9H606 182 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 CALHM2Q9HA72 323 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 MRPL22Q9NWU5 206 aaKnown RBP8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 MIOXQ9UGB7 285 aa8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 NOP16Q9Y3C1 178 aaKnown RBP8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 SPTAN1Q13813 2472 aaKnown RBP8.48□□□□□ -1.05
LRTOMT-201ENST00000289488 TRAV18A0A075B6X5 111 aa8.47□□□□□ -1.05
LRTOMT-201ENST00000289488 NPIPB13A6NJU9 1138 aa8.47□□□□□ -1.05
LRTOMT-201ENST00000289488 PRR32B1ATL7 298 aa8.47□□□□□ -1.05
LRTOMT-201ENST00000289488 NPIPB4C9JG80 1138 aa8.47□□□□□ -1.05
LRTOMT-201ENST00000289488 DNPH1O43598 174 aa8.47□□□□□ -1.05
LRTOMT-201ENST00000289488 UPK3AO75631 287 aa8.47□□□□□ -1.05
LRTOMT-201ENST00000289488 GLCEO94923 617 aa8.47□□□□□ -1.05
LRTOMT-201ENST00000289488 HTR3BO95264 441 aa8.47□□□□□ -1.05
LRTOMT-201ENST00000289488 RAB3DO95716 219 aa8.47□□□□□ -1.05
LRTOMT-201ENST00000289488 IGHG1P01857 330 aa8.47□□□□□ -1.05
LRTOMT-201ENST00000289488 QDPRP09417 244 aa8.47□□□□□ -1.05
LRTOMT-201ENST00000289488 HLA-GP17693 338 aa8.47□□□□□ -1.05
LRTOMT-201ENST00000289488 CFPP27918 469 aa8.47□□□□□ -1.05
LRTOMT-201ENST00000289488 SOX2P48431 317 aa8.47□□□□□ -1.05
LRTOMT-201ENST00000289488 SLC25A1P53007 311 aa8.47□□□□□ -1.05
LRTOMT-201ENST00000289488 EIF2S3LQ2VIR3 472 aaKnown RBP8.47□□□□□ -1.05
LRTOMT-201ENST00000289488 RNF212Q495C1 297 aa8.47□□□□□ -1.05
LRTOMT-201ENST00000289488 ZNF585AQ6P3V2 769 aa8.47□□□□□ -1.05
LRTOMT-201ENST00000289488 FAM180AQ6UWF9 173 aa8.47□□□□□ -1.05
LRTOMT-201ENST00000289488 DPY19L4Q7Z388 723 aa8.47□□□□□ -1.05
LRTOMT-201ENST00000289488 TMEM123Q8N131 208 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms