RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 TBC1D28Q2M2D7 210 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 PARP15Q460N3 678 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 PVRIGQ6DKI7 326 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 C22orf39Q6P5X5 142 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 FAM199XQ6PEV8 388 aaPredicted RBP3.78□□□□□ -1.8
CD44-202ENST00000278385 DHRS4L2Q6PKH6 230 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 CASP12Q6UXS9 341 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 PRSS48Q7RTY5 328 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 HORMAD1Q86X24 394 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 LGI3Q8N145 548 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 PDIK1LQ8N165 341 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 CA13Q8N1Q1 262 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 Q8N9P0 234 aaPredicted RBP3.78□□□□□ -1.8
CD44-202ENST00000278385 NEXN-AS1Q8NBZ9 246 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 OR1K1Q8NGR3 316 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 ZNF502Q8TBZ5 544 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 PYROXD1Q8WU10 500 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 IL1F10Q8WWZ1 152 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 LZICQ8WZA0 190 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 DNAJA3Q96EY1 480 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 ADTRPQ96IZ2 230 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 MS4A14Q96JA4 679 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 IL17FQ96PD4 163 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 MCEEQ96PE7 176 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 OR8B4Q96RC9 309 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 GPR22Q99680 433 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 CALN1Q9BXU9 219 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 NXF2Q9GZY0 626 aaKnown RBP3.78□□□□□ -1.8
CD44-202ENST00000278385 EBF2Q9HAK2 575 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 CTPS2Q9NRF8 586 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 IMPAD1Q9NX62 359 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 B3GNT2Q9NY97 397 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 PAK5Q9P286 719 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 ZNF107Q9UII5 783 aaPredicted RBP3.78□□□□□ -1.8
CD44-202ENST00000278385 KLHL21Q9UJP4 597 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 EP300Q09472 2414 aaPredicted RBP3.78□□□□□ -1.81
CD44-202ENST00000278385 WDFY4Q6ZS81 3184 aa3.77□□□□□ -1.81
CD44-202ENST00000278385 TRIOO75962 3097 aa3.77□□□□□ -1.81
CD44-202ENST00000278385 ZNF638Q14966 1978 aaKnown RBP3.77□□□□□ -1.81
CD44-202ENST00000278385 SRRM3A6NNA2 597 aaPredicted RBP3.77□□□□□ -1.81
CD44-202ENST00000278385 FAM72CH0Y354 149 aa3.77□□□□□ -1.81
CD44-202ENST00000278385 PSMD12O00232 456 aaPredicted RBP3.77□□□□□ -1.81
CD44-202ENST00000278385 PFDN6O15212 129 aa3.77□□□□□ -1.81
CD44-202ENST00000278385 CRXO43186 299 aaPredicted RBP3.77□□□□□ -1.81
CD44-202ENST00000278385 PHF1O43189 567 aaPredicted RBP3.77□□□□□ -1.81
CD44-202ENST00000278385 SYNGR1O43759 233 aa3.77□□□□□ -1.81
CD44-202ENST00000278385 DPM1O60762 260 aa3.77□□□□□ -1.81
CD44-202ENST00000278385 GATBO75879 557 aaKnown RBP3.77□□□□□ -1.81
CD44-202ENST00000278385 PAK4O96013 591 aaPredicted RBP3.77□□□□□ -1.81
CD44-202ENST00000278385 IGHV2-5P01817 119 aa3.77□□□□□ -1.81
CD44-202ENST00000278385 CD74P04233 296 aa3.77□□□□□ -1.81
CD44-202ENST00000278385 HIST1H1EP10412 219 aaKnown RBP3.77□□□□□ -1.81
CD44-202ENST00000278385 ADRB3P13945 408 aa3.77□□□□□ -1.81
CD44-202ENST00000278385 PVALBP20472 110 aaPredicted RBP3.77□□□□□ -1.81
CD44-202ENST00000278385 PSMA1P25786 263 aaKnown RBP3.77□□□□□ -1.81
CD44-202ENST00000278385 SSTR2P30874 369 aa3.77□□□□□ -1.81
CD44-202ENST00000278385 CDKN2AP42771 156 aaKnown RBP3.77□□□□□ -1.81
CD44-202ENST00000278385 KIR2DS4P43632 304 aa3.77□□□□□ -1.81
CD44-202ENST00000278385 GABRA4P48169 554 aa3.77□□□□□ -1.81
CD44-202ENST00000278385 HCCSP53701 268 aa3.77□□□□□ -1.81
CD44-202ENST00000278385 AQP5P55064 265 aa3.77□□□□□ -1.81
CD44-202ENST00000278385 FGF8P55075 233 aaPredicted RBP3.77□□□□□ -1.81
CD44-202ENST00000278385 BRWD1-AS2P59051 145 aa3.77□□□□□ -1.81
CD44-202ENST00000278385 TPI1P60174 286 aa3.77□□□□□ -1.81
CD44-202ENST00000278385 HERV-K104P61576 105 aa3.77□□□□□ -1.81
CD44-202ENST00000278385 STXBP1P61764 594 aaKnown RBP3.77□□□□□ -1.81
CD44-202ENST00000278385 CD164Q04900 197 aa3.77□□□□□ -1.81
CD44-202ENST00000278385 ST3GAL4Q11206 333 aa3.77□□□□□ -1.81
CD44-202ENST00000278385 PRPSAP1Q14558 356 aa3.77□□□□□ -1.81
CD44-202ENST00000278385 ZIC1Q15915 447 aa3.77□□□□□ -1.81
CD44-202ENST00000278385 UNC50Q53HI1 259 aa3.77□□□□□ -1.81
CD44-202ENST00000278385 FAM72AQ5TYM5 149 aa3.77□□□□□ -1.81
CD44-202ENST00000278385 TRIQKQ629K1 86 aa3.77□□□□□ -1.81
CD44-202ENST00000278385 TMEM42Q69YG0 159 aa3.77□□□□□ -1.81
CD44-202ENST00000278385 OR52E8Q6IFG1 317 aa3.77□□□□□ -1.81
CD44-202ENST00000278385 FAM72DQ6L9T8 149 aa3.77□□□□□ -1.81
CD44-202ENST00000278385 ZNF549Q6P9A3 640 aa3.77□□□□□ -1.81
CD44-202ENST00000278385 WDR82Q6UXN9 313 aa3.77□□□□□ -1.81
CD44-202ENST00000278385 ADAMTSL5Q6ZMM2 481 aa3.77□□□□□ -1.81
CD44-202ENST00000278385 ZNF571Q7Z3V5 609 aaPredicted RBP3.77□□□□□ -1.81
CD44-202ENST00000278385 FAM72BQ86X60 149 aa3.77□□□□□ -1.81
CD44-202ENST00000278385 CLVS1Q8IUQ0 354 aaPredicted RBP3.77□□□□□ -1.81
CD44-202ENST00000278385 UMODL1-AS1Q8N2C9 162 aa3.77□□□□□ -1.81
CD44-202ENST00000278385 OR10X1Q8NGY0 326 aa3.77□□□□□ -1.81
CD44-202ENST00000278385 RAB8BQ92930 207 aa3.77□□□□□ -1.81
CD44-202ENST00000278385 TESCQ96BS2 214 aa3.77□□□□□ -1.81
CD44-202ENST00000278385 C17orf77Q96MU5 243 aa3.77□□□□□ -1.81
CD44-202ENST00000278385 ZNF681Q96N22 645 aa3.77□□□□□ -1.81
CD44-202ENST00000278385 RCHY1Q96PM5 261 aa3.77□□□□□ -1.81
CD44-202ENST00000278385 TSNAXQ99598 290 aaKnown RBP3.77□□□□□ -1.81
CD44-202ENST00000278385 TMEM204Q9BSN7 226 aa3.77□□□□□ -1.81
CD44-202ENST00000278385 NUDT9Q9BW91 350 aa3.77□□□□□ -1.81
CD44-202ENST00000278385 SLC17A9Q9BYT1 436 aa3.77□□□□□ -1.81
CD44-202ENST00000278385 RHOFQ9HBH0 211 aa3.77□□□□□ -1.81
CD44-202ENST00000278385 MYOZ1Q9NP98 299 aaPredicted RBP3.77□□□□□ -1.81
CD44-202ENST00000278385 KRCC1Q9NPI7 259 aaPredicted RBP3.77□□□□□ -1.81
CD44-202ENST00000278385 TIGARQ9NQ88 270 aa3.77□□□□□ -1.81
CD44-202ENST00000278385 FBXO6Q9NRD1 293 aaPredicted RBP3.77□□□□□ -1.81
CD44-202ENST00000278385 Q9UF83 564 aa3.77□□□□□ -1.81
CD44-202ENST00000278385 FARSAQ9Y285 508 aaKnown RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms