RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 OR2T29Q8NH02 315 aa7.26□□□□□ -1.25
TPM3-201ENST00000271850 PIGCQ92535 297 aa7.26□□□□□ -1.25
TPM3-201ENST00000271850 PGAM5Q96HS1 289 aa7.26□□□□□ -1.25
TPM3-201ENST00000271850 ZNF488Q96MN9 340 aa7.26□□□□□ -1.25
TPM3-201ENST00000271850 MICU1Q9BPX6 476 aa7.26□□□□□ -1.25
TPM3-201ENST00000271850 MRPL18Q9H0U6 180 aaKnown RBP7.26□□□□□ -1.25
TPM3-201ENST00000271850 DNTTIP1Q9H147 329 aa7.26□□□□□ -1.25
TPM3-201ENST00000271850 MEGF9Q9H1U4 602 aa7.26□□□□□ -1.25
TPM3-201ENST00000271850 OR10A2Q9H208 303 aa7.26□□□□□ -1.25
TPM3-201ENST00000271850 OR51V1Q9H2C8 321 aa7.26□□□□□ -1.25
TPM3-201ENST00000271850 FAM206AQ9NX38 181 aa7.26□□□□□ -1.25
TPM3-201ENST00000271850 BAIAP2Q9UQB8 552 aa7.26□□□□□ -1.25
TPM3-201ENST00000271850 SAMHD1Q9Y3Z3 626 aaKnown RBP7.26□□□□□ -1.25
TPM3-201ENST00000271850 LRP12Q9Y561 859 aa7.26□□□□□ -1.25
TPM3-201ENST00000271850 MPC1Q9Y5U8 109 aa7.26□□□□□ -1.25
TPM3-201ENST00000271850 CCDC182A6NF36 153 aa7.25□□□□□ -1.25
TPM3-201ENST00000271850 TMEM210A6NLX4 147 aa7.25□□□□□ -1.25
TPM3-201ENST00000271850 PSMD9O00233 223 aa7.25□□□□□ -1.25
TPM3-201ENST00000271850 MTRF1O75570 445 aaKnown RBP7.25□□□□□ -1.25
TPM3-201ENST00000271850 IGLV1-40P01703 118 aa7.25□□□□□ -1.25
TPM3-201ENST00000271850 OPN1MWP04001 364 aa7.25□□□□□ -1.25
TPM3-201ENST00000271850 LYNP07948 512 aa7.25□□□□□ -1.25
TPM3-201ENST00000271850 CSF1P09603 554 aa7.25□□□□□ -1.25
TPM3-201ENST00000271850 H2BFMP0C1H6 154 aa7.25□□□□□ -1.25
TPM3-201ENST00000271850 OPN1MW2P0DN77 364 aa7.25□□□□□ -1.25
TPM3-201ENST00000271850 OPN1MW3P0DN78 364 aa7.25□□□□□ -1.25
TPM3-201ENST00000271850 ZNF3P17036 446 aa7.25□□□□□ -1.25
TPM3-201ENST00000271850 NDUFB7P17568 137 aa7.25□□□□□ -1.25
TPM3-201ENST00000271850 GABRA5P31644 462 aa7.25□□□□□ -1.25
TPM3-201ENST00000271850 GNALP38405 381 aa7.25□□□□□ -1.25
TPM3-201ENST00000271850 KIR2DS4P43632 304 aa7.25□□□□□ -1.25
TPM3-201ENST00000271850 CEBPDP49716 269 aaPredicted RBP7.25□□□□□ -1.25
TPM3-201ENST00000271850 DLX6P56179 175 aa7.25□□□□□ -1.25
TPM3-201ENST00000271850 IL5RAQ01344 420 aa7.25□□□□□ -1.25
TPM3-201ENST00000271850 ACSM1Q08AH1 577 aa7.25□□□□□ -1.25
TPM3-201ENST00000271850 ZNF273Q14593 569 aa7.25□□□□□ -1.25
TPM3-201ENST00000271850 CEP78Q5JTW2 689 aa7.25□□□□□ -1.25
TPM3-201ENST00000271850 PLBD1Q6P4A8 553 aa7.25□□□□□ -1.25
TPM3-201ENST00000271850 Q6ZS46 218 aa7.25□□□□□ -1.25
TPM3-201ENST00000271850 PIGWQ7Z7B1 504 aa7.25□□□□□ -1.25
TPM3-201ENST00000271850 LHFPL4Q7Z7J7 247 aa7.25□□□□□ -1.25
TPM3-201ENST00000271850 ZDHHC23Q8IYP9 409 aa7.25□□□□□ -1.25
TPM3-201ENST00000271850 CMTM4Q8IZR5 234 aa7.25□□□□□ -1.25
TPM3-201ENST00000271850 BATF2Q8N1L9 274 aa7.25□□□□□ -1.25
TPM3-201ENST00000271850 KLHDC1Q8N7A1 406 aa7.25□□□□□ -1.25
TPM3-201ENST00000271850 OR5R1Q8NH85 324 aa7.25□□□□□ -1.25
TPM3-201ENST00000271850 AQP3Q92482 292 aa7.25□□□□□ -1.25
TPM3-201ENST00000271850 SDSLQ96GA7 329 aa7.25□□□□□ -1.25
TPM3-201ENST00000271850 RNF170Q96K19 258 aa7.25□□□□□ -1.25
TPM3-201ENST00000271850 FEVQ99581 238 aa7.25□□□□□ -1.25
TPM3-201ENST00000271850 SSX3Q99909 188 aa7.25□□□□□ -1.25
TPM3-201ENST00000271850 RTL8AQ9BWD3 113 aa7.25□□□□□ -1.25
TPM3-201ENST00000271850 RGCCQ9H4X1 137 aa7.25□□□□□ -1.25
TPM3-201ENST00000271850 MAGIXQ9H6Y5 334 aa7.25□□□□□ -1.25
TPM3-201ENST00000271850 METTL8Q9H825 291 aaKnown RBP7.25□□□□□ -1.25
TPM3-201ENST00000271850 YY1AP1Q9H869 796 aa7.25□□□□□ -1.25
TPM3-201ENST00000271850 ZNF702PQ9H963 129 aa7.25□□□□□ -1.25
TPM3-201ENST00000271850 MED4Q9NPJ6 270 aa7.25□□□□□ -1.25
TPM3-201ENST00000271850 SERTAD4Q9NUC0 356 aa7.25□□□□□ -1.25
TPM3-201ENST00000271850 COPS3Q9UNS2 423 aa7.25□□□□□ -1.25
TPM3-201ENST00000271850 COL7A1Q02388 2944 aa7.24□□□□□ -1.25
TPM3-201ENST00000271850 A0A1W2PQ09 198 aa7.24□□□□□ -1.25
TPM3-201ENST00000271850 NKX6-3A6NJ46 265 aa7.24□□□□□ -1.25
TPM3-201ENST00000271850 ANXA2P2A6NMY6 339 aa7.24□□□□□ -1.25
TPM3-201ENST00000271850 RIIAD1A6NNX1 92 aa7.24□□□□□ -1.25
TPM3-201ENST00000271850 ZNF732B4DXR9 585 aa7.24□□□□□ -1.25
TPM3-201ENST00000271850 SYNGR1O43759 233 aa7.24□□□□□ -1.25
TPM3-201ENST00000271850 SRSF10O75494 262 aaKnown RBP7.24□□□□□ -1.25
TPM3-201ENST00000271850 IFNGP01579 166 aa7.24□□□□□ -1.25
TPM3-201ENST00000271850 T-ENOLP0DO92 83 aa7.24□□□□□ -1.25
TPM3-201ENST00000271850 CCL3L1P16619 93 aa7.24□□□□□ -1.25
TPM3-201ENST00000271850 JUNBP17275 347 aaPredicted RBP7.24□□□□□ -1.25
TPM3-201ENST00000271850 ALOX5APP20292 161 aa7.24□□□□□ -1.25
TPM3-201ENST00000271850 GLRA1P23415 457 aa7.24□□□□□ -1.25
TPM3-201ENST00000271850 CFL1P23528 166 aaKnown RBP7.24□□□□□ -1.25
TPM3-201ENST00000271850 EEF1B2P24534 225 aaKnown RBP7.24□□□□□ -1.25
TPM3-201ENST00000271850 GABRA2P47869 451 aa7.24□□□□□ -1.25
TPM3-201ENST00000271850 BLVRAP53004 296 aa7.24□□□□□ -1.25
TPM3-201ENST00000271850 MFGE8Q08431 387 aaPredicted RBP7.24□□□□□ -1.25
TPM3-201ENST00000271850 FBLN7Q53RD9 439 aa7.24□□□□□ -1.25
TPM3-201ENST00000271850 NCR3LG1Q68D85 454 aa7.24□□□□□ -1.25
TPM3-201ENST00000271850 ACP7Q6ZNF0 438 aa7.24□□□□□ -1.25
TPM3-201ENST00000271850 KCTD8Q6ZWB6 473 aa7.24□□□□□ -1.25
TPM3-201ENST00000271850 SHFQ7M4L6 423 aa7.24□□□□□ -1.25
TPM3-201ENST00000271850 TCF23Q7RTU1 214 aa7.24□□□□□ -1.25
TPM3-201ENST00000271850 ADGRG5Q8IZF4 528 aa7.24□□□□□ -1.25
TPM3-201ENST00000271850 TMEM185AQ8NFB2 350 aa7.24□□□□□ -1.25
TPM3-201ENST00000271850 CLPTM1LQ96KA5 538 aa7.24□□□□□ -1.25
TPM3-201ENST00000271850 CAB39Q9Y376 341 aaPredicted RBP7.24□□□□□ -1.25
TPM3-201ENST00000271850 BTBD17A6NE02 478 aa7.23□□□□□ -1.25
TPM3-201ENST00000271850 ARRDC5A6NEK1 342 aa7.23□□□□□ -1.25
TPM3-201ENST00000271850 ANKRD61A6NGH8 418 aa7.23□□□□□ -1.25
TPM3-201ENST00000271850 FAM90A8PA6NJQ4 464 aa7.23□□□□□ -1.25
TPM3-201ENST00000271850 RFPL4AA6NLU0 287 aa7.23□□□□□ -1.25
TPM3-201ENST00000271850 RFPL4AL1F8VTS6 287 aa7.23□□□□□ -1.25
TPM3-201ENST00000271850 ANGPTL7O43827 346 aa7.23□□□□□ -1.25
TPM3-201ENST00000271850 PAHP00439 452 aa7.23□□□□□ -1.25
TPM3-201ENST00000271850 CD28P10747 220 aa7.23□□□□□ -1.25
TPM3-201ENST00000271850 FAHP16930 419 aa7.23□□□□□ -1.25
TPM3-201ENST00000271850 RAB13P51153 203 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms