RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 OCM2P0CE71 109 aa10.7□□□□□ -0.7
SS18-202ENST00000269138 CHN2P52757 468 aa10.7□□□□□ -0.7
SS18-202ENST00000269138 GMFBP60983 142 aa10.7□□□□□ -0.7
SS18-202ENST00000269138 LMO4P61968 165 aa10.7□□□□□ -0.7
SS18-202ENST00000269138 KRTAP1-1Q07627 177 aa10.7□□□□□ -0.7
SS18-202ENST00000269138 TBCEQ15813 527 aaPredicted RBP10.7□□□□□ -0.7
SS18-202ENST00000269138 LIPKQ5VXJ0 399 aa10.7□□□□□ -0.7
SS18-202ENST00000269138 SFRP4Q6FHJ7 346 aaPredicted RBP10.7□□□□□ -0.7
SS18-202ENST00000269138 HAGHLQ6PII5 290 aaPredicted RBP10.7□□□□□ -0.7
SS18-202ENST00000269138 C1orf87Q8N0U7 546 aa10.7□□□□□ -0.7
SS18-202ENST00000269138 SPARTQ8N0X7 666 aa10.7□□□□□ -0.7
SS18-202ENST00000269138 PARP16Q8N5Y8 322 aa10.7□□□□□ -0.7
SS18-202ENST00000269138 SEH1LQ96EE3 360 aa10.7□□□□□ -0.7
SS18-202ENST00000269138 OPALINQ96PE5 141 aa10.7□□□□□ -0.7
SS18-202ENST00000269138 GSX1Q9H4S2 264 aaPredicted RBP10.7□□□□□ -0.7
SS18-202ENST00000269138 ZCCHC4Q9H5U6 513 aa10.7□□□□□ -0.7
SS18-202ENST00000269138 SLC7A11Q9UPY5 501 aa10.7□□□□□ -0.7
SS18-202ENST00000269138 CR1P17927 2039 aa10.7□□□□□ -0.7
SS18-202ENST00000269138 PPIAL4EA0A075B759 164 aa10.69□□□□□ -0.7
SS18-202ENST00000269138 IGHV3OR15-7A0A075B7D8 119 aa10.69□□□□□ -0.7
SS18-202ENST00000269138 A0A1W2PPK0 400 aa10.69□□□□□ -0.7
SS18-202ENST00000269138 PPIAL4DF5H284 164 aa10.69□□□□□ -0.7
SS18-202ENST00000269138 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.69□□□□□ -0.7
SS18-202ENST00000269138 AKR7A2O43488 359 aa10.69□□□□□ -0.7
SS18-202ENST00000269138 CD1AP06126 327 aa10.69□□□□□ -0.7
SS18-202ENST00000269138 PPIAL4FP0DN26 164 aa10.69□□□□□ -0.7
SS18-202ENST00000269138 FOSL1P15407 271 aa10.69□□□□□ -0.7
SS18-202ENST00000269138 AZGP1P25311 298 aaKnown RBP10.69□□□□□ -0.7
SS18-202ENST00000269138 HAAOP46952 286 aa10.69□□□□□ -0.7
SS18-202ENST00000269138 FUT6P51993 359 aa10.69□□□□□ -0.7
SS18-202ENST00000269138 INSL4Q14641 139 aa10.69□□□□□ -0.7
SS18-202ENST00000269138 TMEM249Q2WGJ8 235 aa10.69□□□□□ -0.7
SS18-202ENST00000269138 YIF1BQ5BJH7 314 aa10.69□□□□□ -0.7
SS18-202ENST00000269138 CALHM1Q8IU99 346 aa10.69□□□□□ -0.7
SS18-202ENST00000269138 SERPINA12Q8IW75 414 aa10.69□□□□□ -0.7
SS18-202ENST00000269138 AQP3Q92482 292 aa10.69□□□□□ -0.7
SS18-202ENST00000269138 TMEM106AQ96A25 262 aa10.69□□□□□ -0.7
SS18-202ENST00000269138 ZNF488Q96MN9 340 aa10.69□□□□□ -0.7
SS18-202ENST00000269138 SPACA5Q96QH8 159 aa10.69□□□□□ -0.7
SS18-202ENST00000269138 OR14A2Q96R54 314 aa10.69□□□□□ -0.7
SS18-202ENST00000269138 MGLLQ99685 303 aa10.69□□□□□ -0.7
SS18-202ENST00000269138 GAL3ST1Q99999 423 aa10.69□□□□□ -0.7
SS18-202ENST00000269138 WDR13Q9H1Z4 485 aa10.69□□□□□ -0.7
SS18-202ENST00000269138 TAS2R4Q9NYW5 299 aa10.69□□□□□ -0.7
SS18-202ENST00000269138 PPIAL4AQ9Y536 164 aa10.69□□□□□ -0.7
SS18-202ENST00000269138 ZANQ9Y493 2812 aa10.69□□□□□ -0.7
SS18-202ENST00000269138 TRBV5-7A0A0A0MS05 114 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 LGALS8O00214 317 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 PIN1P1O15428 100 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 MRPS14O60783 128 aaKnown RBP10.68□□□□□ -0.7
SS18-202ENST00000269138 LY6G6DO95868 133 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 PLATP00750 562 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 IGHV4-31P0DP07 118 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 PCMT1P22061 227 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 CFHR2P36980 270 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 MDH2P40926 338 aaKnown RBP10.68□□□□□ -0.7
SS18-202ENST00000269138 MLLT11Q13015 90 aaPredicted RBP10.68□□□□□ -0.7
SS18-202ENST00000269138 TPBGQ13641 420 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 CNN3Q15417 329 aaKnown RBP10.68□□□□□ -0.7
SS18-202ENST00000269138 Q499Y3 187 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 ZNF773Q6PK81 442 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 ZNF573Q86YE8 665 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 BATF2Q8N1L9 274 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 OR51A2Q8NGJ7 313 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 OR5D14Q8NGL3 314 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 UFD1Q92890 307 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 RFT1Q96AA3 541 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 BORCS8Q96FH0 119 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 TMEM246Q9BRR3 403 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 TMED9Q9BVK6 235 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 ISYNA1Q9NPH2 558 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 CSPG4Q6UVK1 2322 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 CEACAM18A8MTB9 384 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 SRRM5B3KS81 715 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 ZNF879B4DU55 563 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 FAM157AC9JC47 383 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 J3QT63 122 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 INMTO95050 263 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 IGHV2-5P01817 119 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 CD2P06729 351 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 PRKACBP22694 351 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 MTCP1P56278 107 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 RPS25P62851 125 aaKnown RBP10.68□□□□□ -0.7
SS18-202ENST00000269138 ZNF404Q494X3 552 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 KCTD21Q4G0X4 260 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 TMEM155Q4W5P6 130 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 ZNF529Q6P280 563 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 CRIP3Q6Q6R5 217 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 LYPD2Q6UXB3 125 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 ZNF367Q7RTV3 350 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 FAM90A1Q86YD7 464 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 SVOPQ8N4V2 548 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 DNAAF1Q8NEP3 725 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 OR10Z1Q8NGY1 313 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 TMEM203Q969S6 136 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 TECTBQ96PL2 329 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 NKX3-1Q99801 234 aaPredicted RBP10.68□□□□□ -0.7
SS18-202ENST00000269138 ZNF665Q9H7R5 613 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 LRCH1Q9Y2L9 728 aa10.68□□□□□ -0.7
SS18-202ENST00000269138 TRAV8-7A0A075B6U6 113 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms