RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 OR6K3Q8NGY3 331 aa12.66□□□□□ -0.38
PDLIM2-201ENST00000265810 ZCCHC14Q8WYQ9 949 aaKnown RBP12.66□□□□□ -0.38
PDLIM2-201ENST00000265810 B3GNT2Q9NY97 397 aa12.66□□□□□ -0.38
PDLIM2-201ENST00000265810 PFDN2Q9UHV9 154 aa12.66□□□□□ -0.38
PDLIM2-201ENST00000265810 PHLDA2Q53GA4 152 aa12.66□□□□□ -0.38
PDLIM2-201ENST00000265810 BRICD5Q6PL45 260 aa12.66□□□□□ -0.38
PDLIM2-201ENST00000265810 MIXL1Q9H2W2 232 aa12.66□□□□□ -0.38
PDLIM2-201ENST00000265810 AGTR1P30556 359 aa12.66□□□□□ -0.38
PDLIM2-201ENST00000265810 TCF15Q12870 199 aa12.66□□□□□ -0.38
PDLIM2-201ENST00000265810 DYRK1AQ13627 763 aa12.66□□□□□ -0.38
PDLIM2-201ENST00000265810 FCN2Q15485 313 aa12.66□□□□□ -0.38
PDLIM2-201ENST00000265810 SPACA3Q8IXA5 215 aa12.66□□□□□ -0.38
PDLIM2-201ENST00000265810 SEC22AQ96IW7 307 aa12.66□□□□□ -0.38
PDLIM2-201ENST00000265810 PLK3Q9H4B4 646 aa12.66□□□□□ -0.38
PDLIM2-201ENST00000265810 SLC17A5Q9NRA2 495 aa12.66□□□□□ -0.38
PDLIM2-201ENST00000265810 FLVCR2Q9UPI3 526 aa12.66□□□□□ -0.38
PDLIM2-201ENST00000265810 STARD10Q9Y365 291 aa12.66□□□□□ -0.38
PDLIM2-201ENST00000265810 C16orf97H3BN30 126 aa12.65□□□□□ -0.38
PDLIM2-201ENST00000265810 SULT1C2O00338 296 aa12.65□□□□□ -0.38
PDLIM2-201ENST00000265810 GMDSO60547 372 aa12.65□□□□□ -0.38
PDLIM2-201ENST00000265810 GLI4P10075 376 aa12.65□□□□□ -0.38
PDLIM2-201ENST00000265810 SFTPCP11686 197 aa12.65□□□□□ -0.38
PDLIM2-201ENST00000265810 RRAS2P62070 204 aaPredicted RBP12.65□□□□□ -0.38
PDLIM2-201ENST00000265810 C19orf48Q6RUI8 117 aa12.65□□□□□ -0.38
PDLIM2-201ENST00000265810 ZNF610Q8N9Z0 462 aa12.65□□□□□ -0.38
PDLIM2-201ENST00000265810 CPEB3Q8NE35 698 aaKnown RBP12.65□□□□□ -0.38
PDLIM2-201ENST00000265810 SF3B6Q9Y3B4 125 aaKnown RBP12.65□□□□□ -0.38
PDLIM2-201ENST00000265810 NKX6-3A6NJ46 265 aa12.65□□□□□ -0.38
PDLIM2-201ENST00000265810 TERTO14746 1132 aaKnown RBP12.65□□□□□ -0.38
PDLIM2-201ENST00000265810 ALDOBP05062 364 aa12.65□□□□□ -0.38
PDLIM2-201ENST00000265810 FUT3P21217 361 aa12.65□□□□□ -0.38
PDLIM2-201ENST00000265810 OR2W3Q7Z3T1 314 aa12.65□□□□□ -0.38
PDLIM2-201ENST00000265810 MRPS18CQ9Y3D5 142 aaKnown RBP12.65□□□□□ -0.38
PDLIM2-201ENST00000265810 WDR87Q6ZQQ6 2873 aa12.65□□□□□ -0.38
PDLIM2-201ENST00000265810 ZSCAN5BA6NJL1 495 aa12.65□□□□□ -0.38
PDLIM2-201ENST00000265810 TGM6O95932 706 aa12.65□□□□□ -0.38
PDLIM2-201ENST00000265810 KLF3P57682 345 aaPredicted RBP12.65□□□□□ -0.38
PDLIM2-201ENST00000265810 AADACL3Q5VUY0 350 aa12.65□□□□□ -0.38
PDLIM2-201ENST00000265810 OR52W1Q6IF63 320 aa12.65□□□□□ -0.38
PDLIM2-201ENST00000265810 EIF5AL1Q6IS14 154 aaKnown RBP12.65□□□□□ -0.38
PDLIM2-201ENST00000265810 OR4C16Q8NGL9 310 aa12.65□□□□□ -0.38
PDLIM2-201ENST00000265810 SLC25A40Q8TBP6 338 aa12.65□□□□□ -0.38
PDLIM2-201ENST00000265810 ELMOD3Q96FG2 381 aa12.65□□□□□ -0.38
PDLIM2-201ENST00000265810 ZNF2Q9BSG1 426 aaPredicted RBP12.65□□□□□ -0.38
PDLIM2-201ENST00000265810 KCNJ16Q9NPI9 418 aa12.65□□□□□ -0.38
PDLIM2-201ENST00000265810 ZNF224Q9NZL3 707 aa12.65□□□□□ -0.38
PDLIM2-201ENST00000265810 MPC1Q9Y5U8 109 aa12.65□□□□□ -0.38
PDLIM2-201ENST00000265810 PIGBOS1A0A0B4J2F0 54 aa12.64□□□□□ -0.39
PDLIM2-201ENST00000265810 SPINT2O43291 252 aa12.64□□□□□ -0.39
PDLIM2-201ENST00000265810 HOXD4P09016 255 aaPredicted RBP12.64□□□□□ -0.39
PDLIM2-201ENST00000265810 P2RY6Q15077 328 aa12.64□□□□□ -0.39
PDLIM2-201ENST00000265810 GLRX5Q86SX6 157 aa12.64□□□□□ -0.39
PDLIM2-201ENST00000265810 CADM3Q8N126 398 aa12.64□□□□□ -0.39
PDLIM2-201ENST00000265810 OR4D6Q8NGJ1 314 aa12.64□□□□□ -0.39
PDLIM2-201ENST00000265810 TMEM54Q969K7 222 aa12.64□□□□□ -0.39
PDLIM2-201ENST00000265810 ZNF837Q96EG3 531 aaPredicted RBP12.64□□□□□ -0.39
PDLIM2-201ENST00000265810 OR2J1Q9GZK6 312 aa12.64□□□□□ -0.39
PDLIM2-201ENST00000265810 TINAGQ9UJW2 476 aa12.64□□□□□ -0.39
PDLIM2-201ENST00000265810 ZNF407Q9C0G0 2248 aa12.64□□□□□ -0.39
PDLIM2-201ENST00000265810 SERPINE3A8MV23 424 aa12.64□□□□□ -0.39
PDLIM2-201ENST00000265810 SLC33A1O00400 549 aaPredicted RBP12.64□□□□□ -0.39
PDLIM2-201ENST00000265810 CDC14BO60729 498 aa12.64□□□□□ -0.39
PDLIM2-201ENST00000265810 CD1AP06126 327 aa12.64□□□□□ -0.39
PDLIM2-201ENST00000265810 PI3P19957 117 aa12.64□□□□□ -0.39
PDLIM2-201ENST00000265810 NFYBP25208 207 aa12.64□□□□□ -0.39
PDLIM2-201ENST00000265810 LHX2P50458 406 aa12.64□□□□□ -0.39
PDLIM2-201ENST00000265810 AKIRIN2Q53H80 203 aa12.64□□□□□ -0.39
PDLIM2-201ENST00000265810 C10orf128Q5T292 105 aa12.64□□□□□ -0.39
PDLIM2-201ENST00000265810 C6orf201Q7Z4U5 140 aa12.64□□□□□ -0.39
PDLIM2-201ENST00000265810 NOXA1Q86UR1 476 aa12.64□□□□□ -0.39
PDLIM2-201ENST00000265810 SGK3Q96BR1 496 aa12.64□□□□□ -0.39
PDLIM2-201ENST00000265810 KIRREL1Q96J84 757 aa12.64□□□□□ -0.39
PDLIM2-201ENST00000265810 RP2O75695 350 aa12.64□□□□□ -0.39
PDLIM2-201ENST00000265810 ATG12O94817 140 aa12.64□□□□□ -0.39
PDLIM2-201ENST00000265810 NBL1P41271 181 aa12.64□□□□□ -0.39
PDLIM2-201ENST00000265810 FBXW12Q6X9E4 464 aa12.64□□□□□ -0.39
PDLIM2-201ENST00000265810 NCCRP1Q6ZVX7 275 aaPredicted RBP12.64□□□□□ -0.39
PDLIM2-201ENST00000265810 CDH24Q86UP0 819 aa12.64□□□□□ -0.39
PDLIM2-201ENST00000265810 OR10AD1Q8NGE0 317 aa12.64□□□□□ -0.39
PDLIM2-201ENST00000265810 OR10J5Q8NHC4 309 aa12.64□□□□□ -0.39
PDLIM2-201ENST00000265810 SPIN2AQ99865 258 aa12.64□□□□□ -0.39
PDLIM2-201ENST00000265810 SPIN2BQ9BPZ2 258 aa12.64□□□□□ -0.39
PDLIM2-201ENST00000265810 POFUT1Q9H488 388 aa12.64□□□□□ -0.39
PDLIM2-201ENST00000265810 LMX1BO60663 402 aa12.64□□□□□ -0.39
PDLIM2-201ENST00000265810 GAS1P54826 345 aa12.64□□□□□ -0.39
PDLIM2-201ENST00000265810 SCAND1P57086 179 aa12.64□□□□□ -0.39
PDLIM2-201ENST00000265810 ZNF92Q03936 586 aa12.64□□□□□ -0.39
PDLIM2-201ENST00000265810 SMIM21Q3B7S5 101 aa12.64□□□□□ -0.39
PDLIM2-201ENST00000265810 CD200R1LQ6Q8B3 271 aa12.64□□□□□ -0.39
PDLIM2-201ENST00000265810 RAB39BQ96DA2 213 aa12.64□□□□□ -0.39
PDLIM2-201ENST00000265810 FAAP24Q9BTP7 215 aa12.64□□□□□ -0.39
PDLIM2-201ENST00000265810 DPCDQ9BVM2 203 aaPredicted RBP12.64□□□□□ -0.39
PDLIM2-201ENST00000265810 AKR7A2O43488 359 aa12.63□□□□□ -0.39
PDLIM2-201ENST00000265810 KIR2DL3P43628 341 aa12.63□□□□□ -0.39
PDLIM2-201ENST00000265810 CLDN18P56856 261 aa12.63□□□□□ -0.39
PDLIM2-201ENST00000265810 RAB2AP61019 212 aa12.63□□□□□ -0.39
PDLIM2-201ENST00000265810 DBX2Q6ZNG2 339 aa12.63□□□□□ -0.39
PDLIM2-201ENST00000265810 C1orf87Q8N0U7 546 aa12.63□□□□□ -0.39
PDLIM2-201ENST00000265810 OR1S1Q8NH92 325 aa12.63□□□□□ -0.39
PDLIM2-201ENST00000265810 ST7LQ8TDW4 575 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms