RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 FXNQ16595 210 aa12.44□□□□□ -0.42
CDH3-201ENST00000264012 CLLU1Q5K131 121 aa12.44□□□□□ -0.42
CDH3-201ENST00000264012 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.44□□□□□ -0.42
CDH3-201ENST00000264012 H3F3CQ6NXT2 135 aa12.44□□□□□ -0.42
CDH3-201ENST00000264012 DGAT2L6Q6ZPD8 337 aa12.44□□□□□ -0.42
CDH3-201ENST00000264012 CNTD2Q9H8S5 307 aa12.44□□□□□ -0.42
CDH3-201ENST00000264012 SMCO4Q9NRQ5 59 aa12.44□□□□□ -0.42
CDH3-201ENST00000264012 ADRB1P08588 477 aa12.43□□□□□ -0.42
CDH3-201ENST00000264012 OR13C7P0DN81 318 aa12.43□□□□□ -0.42
CDH3-201ENST00000264012 ACAA2P42765 397 aaKnown RBP12.43□□□□□ -0.42
CDH3-201ENST00000264012 COL13A1Q5TAT6 717 aaPredicted RBP12.43□□□□□ -0.42
CDH3-201ENST00000264012 TEX261Q6UWH6 196 aa12.43□□□□□ -0.42
CDH3-201ENST00000264012 GALMQ96C23 342 aa12.43□□□□□ -0.42
CDH3-201ENST00000264012 AK3Q9UIJ7 227 aa12.43□□□□□ -0.42
CDH3-201ENST00000264012 COLQQ9Y215 455 aaPredicted RBP12.43□□□□□ -0.42
CDH3-201ENST00000264012 U3KQ87 197 aa12.43□□□□□ -0.42
CDH3-201ENST00000264012 CA6P23280 308 aa12.43□□□□□ -0.42
CDH3-201ENST00000264012 OR3A4PP47883 348 aa12.43□□□□□ -0.42
CDH3-201ENST00000264012 CXorf67Q86X51 503 aaPredicted RBP12.43□□□□□ -0.42
CDH3-201ENST00000264012 Q8IYB0 196 aa12.43□□□□□ -0.42
CDH3-201ENST00000264012 FAM117AQ9C073 453 aa12.43□□□□□ -0.42
CDH3-201ENST00000264012 RBBP6Q7Z6E9 1792 aaKnown RBP12.43□□□□□ -0.42
CDH3-201ENST00000264012 SPRY3O43610 288 aa12.43□□□□□ -0.42
CDH3-201ENST00000264012 SSX4O60224 188 aa12.43□□□□□ -0.42
CDH3-201ENST00000264012 PRDX4Q13162 271 aa12.43□□□□□ -0.42
CDH3-201ENST00000264012 IRF3Q14653 427 aa12.43□□□□□ -0.42
CDH3-201ENST00000264012 PMS2CLQ68D20 193 aa12.43□□□□□ -0.42
CDH3-201ENST00000264012 SLC38A6Q8IZM9 456 aa12.43□□□□□ -0.42
CDH3-201ENST00000264012 ZNF721Q8TF20 911 aa12.43□□□□□ -0.42
CDH3-201ENST00000264012 ZNF501Q96CX3 271 aaPredicted RBP12.43□□□□□ -0.42
CDH3-201ENST00000264012 FRRS1LQ9P0K9 344 aa12.43□□□□□ -0.42
CDH3-201ENST00000264012 ZNF230Q9UIE0 474 aaPredicted RBP12.43□□□□□ -0.42
CDH3-201ENST00000264012 ABCD4O14678 606 aa12.43□□□□□ -0.42
CDH3-201ENST00000264012 OIP5O43482 229 aa12.43□□□□□ -0.42
CDH3-201ENST00000264012 IAPPP10997 89 aa12.43□□□□□ -0.42
CDH3-201ENST00000264012 HLA-DOBP13765 273 aa12.43□□□□□ -0.42
CDH3-201ENST00000264012 CD96P40200 585 aa12.43□□□□□ -0.42
CDH3-201ENST00000264012 SUB1P53999 127 aaKnown RBP eCLIP12.43□□□□□ -0.42
CDH3-201ENST00000264012 RTL8BQ17RB0 113 aa12.43□□□□□ -0.42
CDH3-201ENST00000264012 ZNF705FA8MVS1 300 aaPredicted RBP12.42□□□□□ -0.42
CDH3-201ENST00000264012 TSTD3H0UI37 97 aa12.42□□□□□ -0.42
CDH3-201ENST00000264012 GPR31O00270 319 aa12.42□□□□□ -0.42
CDH3-201ENST00000264012 GP1BAP07359 652 aa12.42□□□□□ -0.42
CDH3-201ENST00000264012 ZNF705DP0CH99 300 aaPredicted RBP12.42□□□□□ -0.42
CDH3-201ENST00000264012 ZNF705BP0CI00 300 aaPredicted RBP12.42□□□□□ -0.42
CDH3-201ENST00000264012 FPR2P25090 351 aa12.42□□□□□ -0.42
CDH3-201ENST00000264012 FOXL2P58012 376 aa12.42□□□□□ -0.42
CDH3-201ENST00000264012 Q6ZRG5 221 aa12.42□□□□□ -0.42
CDH3-201ENST00000264012 ZDHHC22Q8N966 263 aa12.42□□□□□ -0.42
CDH3-201ENST00000264012 OR10P1Q8NGE3 313 aa12.42□□□□□ -0.42
CDH3-201ENST00000264012 OR8B12Q8NGG6 310 aa12.42□□□□□ -0.42
CDH3-201ENST00000264012 LIN37Q96GY3 246 aaPredicted RBP12.42□□□□□ -0.42
CDH3-201ENST00000264012 ASXL3Q9C0F0 2248 aa12.42□□□□□ -0.42
CDH3-201ENST00000264012 IGKV1D-16P01601 117 aa12.42□□□□□ -0.42
CDH3-201ENST00000264012 BGLAPP02818 100 aa12.42□□□□□ -0.42
CDH3-201ENST00000264012 CCL2P13500 99 aa12.42□□□□□ -0.42
CDH3-201ENST00000264012 ADIRFQ15847 76 aa12.42□□□□□ -0.42
CDH3-201ENST00000264012 PLA1AQ53H76 456 aa12.42□□□□□ -0.42
CDH3-201ENST00000264012 C6orf201Q7Z4U5 140 aa12.42□□□□□ -0.42
CDH3-201ENST00000264012 OR2Z1Q8NG97 314 aa12.42□□□□□ -0.42
CDH3-201ENST00000264012 SF3B5Q9BWJ5 86 aaKnown RBP12.42□□□□□ -0.42
CDH3-201ENST00000264012 WDR54Q9H977 334 aa12.42□□□□□ -0.42
CDH3-201ENST00000264012 MDFIC2A0A1B0GVS7 189 aa12.42□□□□□ -0.42
CDH3-201ENST00000264012 ZNF724A8MTY0 619 aa12.42□□□□□ -0.42
CDH3-201ENST00000264012 F6UZH7 168 aa12.42□□□□□ -0.42
CDH3-201ENST00000264012 LYZL6O75951 148 aa12.42□□□□□ -0.42
CDH3-201ENST00000264012 ZNF83P51522 516 aa12.42□□□□□ -0.42
CDH3-201ENST00000264012 ZFP82Q8N141 532 aa12.42□□□□□ -0.42
CDH3-201ENST00000264012 FAAP24Q9BTP7 215 aa12.42□□□□□ -0.42
CDH3-201ENST00000264012 NKX6-2Q9C056 277 aaPredicted RBP12.42□□□□□ -0.42
CDH3-201ENST00000264012 SVILO95425 2214 aa12.42□□□□□ -0.42
CDH3-201ENST00000264012 TMEM30CPA0ZSE6 113 aa12.42□□□□□ -0.42
CDH3-201ENST00000264012 C21orf140B9A014 251 aa12.42□□□□□ -0.42
CDH3-201ENST00000264012 RAG2P55895 527 aa12.42□□□□□ -0.42
CDH3-201ENST00000264012 SLC35E1Q96K37 410 aa12.42□□□□□ -0.42
CDH3-201ENST00000264012 TET1Q8NFU7 2136 aa12.41□□□□□ -0.42
CDH3-201ENST00000264012 CDC14BO60729 498 aa12.41□□□□□ -0.42
CDH3-201ENST00000264012 SDHBP21912 280 aa12.41□□□□□ -0.42
CDH3-201ENST00000264012 ACKR3P25106 362 aa12.41□□□□□ -0.42
CDH3-201ENST00000264012 CD80P33681 288 aa12.41□□□□□ -0.42
CDH3-201ENST00000264012 TAGLN2P37802 199 aaKnown RBP12.41□□□□□ -0.42
CDH3-201ENST00000264012 LSM6P62312 80 aaKnown RBP12.41□□□□□ -0.42
CDH3-201ENST00000264012 AANATQ16613 207 aa12.41□□□□□ -0.42
CDH3-201ENST00000264012 THNSL2Q86YJ6 484 aa12.41□□□□□ -0.42
CDH3-201ENST00000264012 UBALD1Q8TB05 177 aa12.41□□□□□ -0.42
CDH3-201ENST00000264012 AP1S3Q96PC3 154 aa12.41□□□□□ -0.42
CDH3-201ENST00000264012 KPTNQ9Y664 436 aa12.41□□□□□ -0.42
CDH3-201ENST00000264012 OR4C45A6NMZ5 311 aa12.41□□□□□ -0.42
CDH3-201ENST00000264012 GSK3AP49840 483 aa12.41□□□□□ -0.42
CDH3-201ENST00000264012 PRSS12P56730 875 aa12.41□□□□□ -0.42
CDH3-201ENST00000264012 LRRTM1Q86UE6 522 aa12.41□□□□□ -0.42
CDH3-201ENST00000264012 FAM58AQ8N1B3 248 aa12.41□□□□□ -0.42
CDH3-201ENST00000264012 OR8U1Q8NH10 309 aa12.41□□□□□ -0.42
CDH3-201ENST00000264012 FBXO17Q96EF6 278 aa12.41□□□□□ -0.42
CDH3-201ENST00000264012 MRPS24Q96EL2 167 aaKnown RBP12.41□□□□□ -0.42
CDH3-201ENST00000264012 SAMD10Q9BYL1 202 aa12.41□□□□□ -0.42
CDH3-201ENST00000264012 CACNA1IQ9P0X4 2223 aa12.41□□□□□ -0.42
CDH3-201ENST00000264012 ZNF629Q9UEG4 869 aaPredicted RBP12.41□□□□□ -0.42
CDH3-201ENST00000264012 LAMP3Q9UQV4 416 aa12.41□□□□□ -0.42
CDH3-201ENST00000264012 BMP5P22003 454 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms