RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 SSX6Q7RTT6 188 aa13.26□□□□□ -0.29
USE1-201ENST00000263897 OR2T27Q8NH04 317 aa13.26□□□□□ -0.29
USE1-201ENST00000263897 GATAD2BQ8WXI9 593 aa13.26□□□□□ -0.29
USE1-201ENST00000263897 AQP3Q92482 292 aa13.26□□□□□ -0.29
USE1-201ENST00000263897 EME1Q96AY2 570 aa13.26□□□□□ -0.29
USE1-201ENST00000263897 TBX5Q99593 518 aa13.26□□□□□ -0.29
USE1-201ENST00000263897 DCTN5Q9BTE1 182 aa13.26□□□□□ -0.29
USE1-201ENST00000263897 NOX4Q9NPH5 578 aa13.26□□□□□ -0.29
USE1-201ENST00000263897 NLKQ9UBE8 527 aa13.26□□□□□ -0.29
USE1-201ENST00000263897 V9GYS6 101 aa13.26□□□□□ -0.29
USE1-201ENST00000263897 IGHV1-69DA0A0B4J2H0 117 aa13.25□□□□□ -0.29
USE1-201ENST00000263897 A0A1W2PQL4 384 aaPredicted RBP13.25□□□□□ -0.29
USE1-201ENST00000263897 METTL15A6NJ78 407 aa13.25□□□□□ -0.29
USE1-201ENST00000263897 OR2AT4A6NND4 320 aa13.25□□□□□ -0.29
USE1-201ENST00000263897 HOXA3O43365 443 aaPredicted RBP13.25□□□□□ -0.29
USE1-201ENST00000263897 RPP14O95059 124 aaKnown RBP13.25□□□□□ -0.29
USE1-201ENST00000263897 IGHV1-69P01742 117 aa13.25□□□□□ -0.29
USE1-201ENST00000263897 TFF1P04155 84 aa13.25□□□□□ -0.29
USE1-201ENST00000263897 KRT8P05787 483 aa13.25□□□□□ -0.29
USE1-201ENST00000263897 SELLP14151 372 aa13.25□□□□□ -0.29
USE1-201ENST00000263897 IL13RA1P78552 427 aa13.25□□□□□ -0.29
USE1-201ENST00000263897 TMED1Q13445 227 aa13.25□□□□□ -0.29
USE1-201ENST00000263897 CLVS2Q5SYC1 327 aa13.25□□□□□ -0.29
USE1-201ENST00000263897 ZNF684Q5T5D7 378 aa13.25□□□□□ -0.29
USE1-201ENST00000263897 PLCXD3Q63HM9 321 aa13.25□□□□□ -0.29
USE1-201ENST00000263897 TMEM42Q69YG0 159 aa13.25□□□□□ -0.29
USE1-201ENST00000263897 HAGHLQ6PII5 290 aaPredicted RBP13.25□□□□□ -0.29
USE1-201ENST00000263897 CCDC121Q6ZUS5 278 aa13.25□□□□□ -0.29
USE1-201ENST00000263897 YIPF7Q8N8F6 280 aa13.25□□□□□ -0.29
USE1-201ENST00000263897 OR14K1Q8NGZ2 314 aa13.25□□□□□ -0.29
USE1-201ENST00000263897 C8orf46Q8TAG6 207 aa13.25□□□□□ -0.29
USE1-201ENST00000263897 LHX4Q969G2 390 aa13.25□□□□□ -0.29
USE1-201ENST00000263897 TMIGD2Q96BF3 282 aa13.25□□□□□ -0.29
USE1-201ENST00000263897 GAFA1Q96PS6 74 aa13.25□□□□□ -0.29
USE1-201ENST00000263897 ACOXLQ9NUZ1 547 aa13.25□□□□□ -0.29
USE1-201ENST00000263897 RASL12Q9NYN1 266 aa13.25□□□□□ -0.29
USE1-201ENST00000263897 SLC22A13Q9Y226 551 aa13.25□□□□□ -0.29
USE1-201ENST00000263897 IGKV1D-17A0A075B6S4 117 aa13.24□□□□□ -0.29
USE1-201ENST00000263897 NKX6-3A6NJ46 265 aa13.24□□□□□ -0.29
USE1-201ENST00000263897 H3BNX3 289 aa13.24□□□□□ -0.29
USE1-201ENST00000263897 DLGAP1O14490 977 aa13.24□□□□□ -0.29
USE1-201ENST00000263897 SIGLEC5O15389 551 aa13.24□□□□□ -0.29
USE1-201ENST00000263897 SULT1C4O75897 302 aa13.24□□□□□ -0.29
USE1-201ENST00000263897 ALPLP05186 524 aa13.24□□□□□ -0.29
USE1-201ENST00000263897 PSG2P11465 335 aa13.24□□□□□ -0.29
USE1-201ENST00000263897 ATP6V1E1P36543 226 aa13.24□□□□□ -0.29
USE1-201ENST00000263897 CDC42P60953 191 aa13.24□□□□□ -0.29
USE1-201ENST00000263897 KPNB1Q14974 876 aaKnown RBP13.24□□□□□ -0.29
USE1-201ENST00000263897 DGUOKQ16854 277 aa13.24□□□□□ -0.29
USE1-201ENST00000263897 TRUB1Q8WWH5 349 aaKnown RBP13.24□□□□□ -0.29
USE1-201ENST00000263897 RFKQ969G6 155 aa13.24□□□□□ -0.29
USE1-201ENST00000263897 UBE2FQ969M7 185 aa13.24□□□□□ -0.29
USE1-201ENST00000263897 ONECUT1Q9UBC0 465 aa13.24□□□□□ -0.29
USE1-201ENST00000263897 SLC25A10Q9UBX3 287 aaPredicted RBP13.24□□□□□ -0.29
USE1-201ENST00000263897 A0A1B0GVI7 797 aa13.23□□□□□ -0.29
USE1-201ENST00000263897 DHRS7CA6NNS2 312 aa13.23□□□□□ -0.29
USE1-201ENST00000263897 APOL3O95236 402 aa13.23□□□□□ -0.29
USE1-201ENST00000263897 CCL1P22362 96 aa13.23□□□□□ -0.29
USE1-201ENST00000263897 GABRA2P47869 451 aa13.23□□□□□ -0.29
USE1-201ENST00000263897 CAV3P56539 151 aa13.23□□□□□ -0.29
USE1-201ENST00000263897 ZFP1Q6P2D0 407 aa13.23□□□□□ -0.29
USE1-201ENST00000263897 C1orf122Q6ZSJ8 110 aa13.23□□□□□ -0.29
USE1-201ENST00000263897 VMO1Q7Z5L0 202 aa13.23□□□□□ -0.29
USE1-201ENST00000263897 CATSPERDQ86XM0 798 aa13.23□□□□□ -0.29
USE1-201ENST00000263897 ZNF573Q86YE8 665 aa13.23□□□□□ -0.29
USE1-201ENST00000263897 CMTM4Q8IZR5 234 aa13.23□□□□□ -0.29
USE1-201ENST00000263897 KIR3DL3Q8N743 410 aa13.23□□□□□ -0.29
USE1-201ENST00000263897 OR10H4Q8NGA5 316 aa13.23□□□□□ -0.29
USE1-201ENST00000263897 H1FXQ92522 213 aaKnown RBP13.23□□□□□ -0.29
USE1-201ENST00000263897 RORBQ92753 470 aa13.23□□□□□ -0.29
USE1-201ENST00000263897 HRASLS5Q96KN8 279 aa13.23□□□□□ -0.29
USE1-201ENST00000263897 ZNF747Q9BV97 191 aa13.23□□□□□ -0.29
USE1-201ENST00000263897 GPR173Q9NS66 373 aa13.23□□□□□ -0.29
USE1-201ENST00000263897 USE1Q9NZ43 259 aa13.23□□□□□ -0.29
USE1-201ENST00000263897 ZNF222Q9UK12 451 aa13.23□□□□□ -0.29
USE1-201ENST00000263897 MAB21L2Q9Y586 359 aa13.23□□□□□ -0.29
USE1-201ENST00000263897 PCDHGB1Q9Y5G3 927 aa13.23□□□□□ -0.29
USE1-201ENST00000263897 ORC6Q9Y5N6 252 aa13.23□□□□□ -0.29
USE1-201ENST00000263897 PQLC2LA1A4F0 135 aa13.22□□□□□ -0.29
USE1-201ENST00000263897 A6NIN4 97 aa13.22□□□□□ -0.29
USE1-201ENST00000263897 E9PQ18 207 aa13.22□□□□□ -0.29
USE1-201ENST00000263897 NOS1APO75052 506 aaPredicted RBP13.22□□□□□ -0.29
USE1-201ENST00000263897 MELTFP08582 738 aa13.22□□□□□ -0.29
USE1-201ENST00000263897 NDUFB7P17568 137 aa13.22□□□□□ -0.29
USE1-201ENST00000263897 HAAOP46952 286 aa13.22□□□□□ -0.29
USE1-201ENST00000263897 SLC25A30Q5SVS4 291 aa13.22□□□□□ -0.29
USE1-201ENST00000263897 METAP1DQ6UB28 335 aaPredicted RBP13.22□□□□□ -0.29
USE1-201ENST00000263897 ACP7Q6ZNF0 438 aa13.22□□□□□ -0.29
USE1-201ENST00000263897 C10orf67Q8IYJ2 551 aa13.22□□□□□ -0.29
USE1-201ENST00000263897 TMEM86BQ8N661 226 aa13.22□□□□□ -0.29
USE1-201ENST00000263897 Q8N7P7 452 aa13.22□□□□□ -0.29
USE1-201ENST00000263897 POC1AQ8NBT0 407 aa13.22□□□□□ -0.29
USE1-201ENST00000263897 ZNRF1Q8ND25 227 aa13.22□□□□□ -0.29
USE1-201ENST00000263897 SDSLQ96GA7 329 aa13.22□□□□□ -0.29
USE1-201ENST00000263897 IMPAD1Q9NX62 359 aa13.22□□□□□ -0.29
USE1-201ENST00000263897 J3QT63 122 aa13.21□□□□□ -0.29
USE1-201ENST00000263897 EI24O14681 340 aa13.21□□□□□ -0.29
USE1-201ENST00000263897 SYNGR1O43759 233 aa13.21□□□□□ -0.29
USE1-201ENST00000263897 PGA5P0DJD9 388 aa13.21□□□□□ -0.29
USE1-201ENST00000263897 ALDH3A2P51648 485 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms