RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 NAXEQ8NCW5 288 aa13.62□□□□□ -0.23
VPS26A-201ENST00000263559 DMRTB1Q96MA1 342 aa13.62□□□□□ -0.23
VPS26A-201ENST00000263559 TM2D1Q9BX74 207 aa13.62□□□□□ -0.23
VPS26A-201ENST00000263559 TINAGL1Q9GZM7 467 aaPredicted RBP13.62□□□□□ -0.23
VPS26A-201ENST00000263559 OPN3Q9H1Y3 402 aaPredicted RBP13.62□□□□□ -0.23
VPS26A-201ENST00000263559 ZNF71Q9NQZ8 489 aaPredicted RBP13.62□□□□□ -0.23
VPS26A-201ENST00000263559 PROCRQ9UNN8 238 aa13.62□□□□□ -0.23
VPS26A-201ENST00000263559 ATMQ13315 3056 aa13.62□□□□□ -0.23
VPS26A-201ENST00000263559 ZNF736B4DX44 427 aaPredicted RBP13.62□□□□□ -0.23
VPS26A-201ENST00000263559 RRP8O43159 456 aaKnown RBP13.62□□□□□ -0.23
VPS26A-201ENST00000263559 HTR3BO95264 441 aa13.62□□□□□ -0.23
VPS26A-201ENST00000263559 NKX2-5P52952 324 aaPredicted RBP13.62□□□□□ -0.23
VPS26A-201ENST00000263559 PRDX4Q13162 271 aa13.62□□□□□ -0.23
VPS26A-201ENST00000263559 RSU1Q15404 277 aa13.62□□□□□ -0.23
VPS26A-201ENST00000263559 KRTCAP3Q53RY4 240 aa13.62□□□□□ -0.23
VPS26A-201ENST00000263559 ASCL4Q6XD76 172 aa13.62□□□□□ -0.23
VPS26A-201ENST00000263559 OR51J1Q9H342 316 aa13.62□□□□□ -0.23
VPS26A-201ENST00000263559 ZNF629Q9UEG4 869 aaPredicted RBP13.62□□□□□ -0.23
VPS26A-201ENST00000263559 ZNF107Q9UII5 783 aaPredicted RBP13.62□□□□□ -0.23
VPS26A-201ENST00000263559 IGKV1-12A0A0C4DH73 117 aa13.61□□□□□ -0.23
VPS26A-201ENST00000263559 MFNGO00587 321 aa13.61□□□□□ -0.23
VPS26A-201ENST00000263559 WDR1O75083 606 aa13.61□□□□□ -0.23
VPS26A-201ENST00000263559 IGKV1D-12P01611 117 aa13.61□□□□□ -0.23
VPS26A-201ENST00000263559 CD74P04233 296 aa13.61□□□□□ -0.23
VPS26A-201ENST00000263559 BLVRBP30043 206 aaPredicted RBP13.61□□□□□ -0.23
VPS26A-201ENST00000263559 GNG2P59768 71 aa13.61□□□□□ -0.23
VPS26A-201ENST00000263559 PDZK1IP1Q13113 114 aa13.61□□□□□ -0.23
VPS26A-201ENST00000263559 RBMS2Q15434 407 aaKnown RBP13.61□□□□□ -0.23
VPS26A-201ENST00000263559 ST3GAL2Q16842 350 aa13.61□□□□□ -0.23
VPS26A-201ENST00000263559 GINS4Q9BRT9 223 aa13.61□□□□□ -0.23
VPS26A-201ENST00000263559 CST4P01036 141 aa13.61□□□□□ -0.23
VPS26A-201ENST00000263559 ZNF324BQ6AW86 544 aaPredicted RBP13.61□□□□□ -0.23
VPS26A-201ENST00000263559 OR52W1Q6IF63 320 aa13.61□□□□□ -0.23
VPS26A-201ENST00000263559 C3P1Q6ZMU1 363 aa13.61□□□□□ -0.23
VPS26A-201ENST00000263559 CXorf67Q86X51 503 aaPredicted RBP13.61□□□□□ -0.23
VPS26A-201ENST00000263559 CALHM1Q8IU99 346 aa13.61□□□□□ -0.23
VPS26A-201ENST00000263559 WDR31Q8NA23 367 aa13.61□□□□□ -0.23
VPS26A-201ENST00000263559 CSNK2A3Q8NEV1 391 aa13.61□□□□□ -0.23
VPS26A-201ENST00000263559 OR5L1Q8NGL2 311 aa13.61□□□□□ -0.23
VPS26A-201ENST00000263559 BOD1Q96IK1 185 aa13.61□□□□□ -0.23
VPS26A-201ENST00000263559 C1QTNF6Q9BXI9 259 aa13.61□□□□□ -0.23
VPS26A-201ENST00000263559 MED28Q9H204 178 aa13.61□□□□□ -0.23
VPS26A-201ENST00000263559 OPA3Q9H6K4 179 aa13.61□□□□□ -0.23
VPS26A-201ENST00000263559 BSNQ9UPA5 3926 aa13.61□□□□□ -0.23
VPS26A-201ENST00000263559 CD300LBA8K4G0 201 aa13.6□□□□□ -0.23
VPS26A-201ENST00000263559 HPXP02790 462 aa13.6□□□□□ -0.23
VPS26A-201ENST00000263559 CSTBP04080 98 aaKnown RBP13.6□□□□□ -0.23
VPS26A-201ENST00000263559 HOXB1P14653 301 aaPredicted RBP13.6□□□□□ -0.23
VPS26A-201ENST00000263559 CPT2P23786 658 aa13.6□□□□□ -0.23
VPS26A-201ENST00000263559 IL32P24001 234 aa13.6□□□□□ -0.23
VPS26A-201ENST00000263559 C1orf185Q5T7R7 199 aa13.6□□□□□ -0.23
VPS26A-201ENST00000263559 BHLHE23Q8NDY6 225 aa13.6□□□□□ -0.23
VPS26A-201ENST00000263559 DACT3Q96B18 629 aaPredicted RBP13.6□□□□□ -0.23
VPS26A-201ENST00000263559 Q96M66 194 aa13.6□□□□□ -0.23
VPS26A-201ENST00000263559 FGF23Q9GZV9 251 aaPredicted RBP13.6□□□□□ -0.23
VPS26A-201ENST00000263559 IFT46Q9NQC8 304 aa13.6□□□□□ -0.23
VPS26A-201ENST00000263559 FIGNL2A6NMB9 653 aa13.6□□□□□ -0.23
VPS26A-201ENST00000263559 PYCARD-AS1I3L0S3 204 aa13.6□□□□□ -0.23
VPS26A-201ENST00000263559 AGFG2O95081 481 aa13.6□□□□□ -0.23
VPS26A-201ENST00000263559 ZNF735P0CB33 412 aa13.6□□□□□ -0.23
VPS26A-201ENST00000263559 GABRR1P24046 479 aa13.6□□□□□ -0.23
VPS26A-201ENST00000263559 RAD52P43351 418 aa13.6□□□□□ -0.23
VPS26A-201ENST00000263559 FCN2Q15485 313 aa13.6□□□□□ -0.23
VPS26A-201ENST00000263559 PNLIPRP3Q17RR3 467 aa13.6□□□□□ -0.23
VPS26A-201ENST00000263559 SPATA46Q5T0L3 261 aa13.6□□□□□ -0.23
VPS26A-201ENST00000263559 Q8NA96 180 aa13.6□□□□□ -0.23
VPS26A-201ENST00000263559 C1orf162Q8NEQ5 155 aaPredicted RBP13.6□□□□□ -0.23
VPS26A-201ENST00000263559 PECRQ9BY49 303 aa13.6□□□□□ -0.23
VPS26A-201ENST00000263559 NPDC1Q9NQX5 325 aaPredicted RBP13.6□□□□□ -0.23
VPS26A-201ENST00000263559 AMY2AP04746 511 aa13.59□□□□□ -0.23
VPS26A-201ENST00000263559 ANXA7P20073 488 aaKnown RBP13.59□□□□□ -0.23
VPS26A-201ENST00000263559 CISD2Q8N5K1 135 aaKnown RBP13.59□□□□□ -0.23
VPS26A-201ENST00000263559 PXT1Q8NFP0 134 aa13.59□□□□□ -0.23
VPS26A-201ENST00000263559 FAM57AQ8TBR7 257 aa13.59□□□□□ -0.23
VPS26A-201ENST00000263559 HPSE2Q8WWQ2 592 aa13.59□□□□□ -0.23
VPS26A-201ENST00000263559 CDH20Q9HBT6 801 aa13.59□□□□□ -0.23
VPS26A-201ENST00000263559 DSPP15924 2871 aaKnown RBP13.59□□□□□ -0.23
VPS26A-201ENST00000263559 PQLC2LA1A4F0 135 aa13.59□□□□□ -0.23
VPS26A-201ENST00000263559 LILRA1O75019 489 aa13.59□□□□□ -0.23
VPS26A-201ENST00000263559 CBR1P16152 277 aa13.59□□□□□ -0.23
VPS26A-201ENST00000263559 HOXC12P31275 282 aa13.59□□□□□ -0.23
VPS26A-201ENST00000263559 PTGER4P35408 488 aa13.59□□□□□ -0.23
VPS26A-201ENST00000263559 MRPL49Q13405 166 aaKnown RBP13.59□□□□□ -0.23
VPS26A-201ENST00000263559 CEACAM21Q3KPI0 293 aa13.59□□□□□ -0.23
VPS26A-201ENST00000263559 ZDHHC23Q8IYP9 409 aa13.59□□□□□ -0.23
VPS26A-201ENST00000263559 FTMTQ8N4E7 242 aa13.59□□□□□ -0.23
VPS26A-201ENST00000263559 OR51F2Q8NH61 342 aa13.59□□□□□ -0.23
VPS26A-201ENST00000263559 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.59□□□□□ -0.23
VPS26A-201ENST00000263559 EIF3KQ9UBQ5 218 aaKnown RBP13.59□□□□□ -0.23
VPS26A-201ENST00000263559 PRR14LQ5THK1 2151 aa13.59□□□□□ -0.23
VPS26A-201ENST00000263559 PRAF2O60831 178 aa13.58□□□□□ -0.23
VPS26A-201ENST00000263559 ZNF780AO75290 641 aaPredicted RBP13.58□□□□□ -0.23
VPS26A-201ENST00000263559 IL2RAP01589 272 aa13.58□□□□□ -0.23
VPS26A-201ENST00000263559 CSN2P05814 226 aa13.58□□□□□ -0.23
VPS26A-201ENST00000263559 CRHP06850 196 aa13.58□□□□□ -0.23
VPS26A-201ENST00000263559 SFTPBP07988 381 aa13.58□□□□□ -0.23
VPS26A-201ENST00000263559 MECP2P51608 486 aaKnown RBP13.58□□□□□ -0.23
VPS26A-201ENST00000263559 GPM6AP51674 278 aa13.58□□□□□ -0.23
VPS26A-201ENST00000263559 NKPD1Q17RQ9 610 aa13.58□□□□□ -0.23
VPS26A-201ENST00000263559 OR2T2Q6IF00 324 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms