RNA–Protein interactions for RNA: ENST00000263274.11

LIG1-201, Transcript of DNA ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIG1, Length 3,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-201ENST00000263274 MTCP1P56278 107 aa11.13□□□□□ -0.63
LIG1-201ENST00000263274 PJVKQ0ZLH3 352 aa11.13□□□□□ -0.63
LIG1-201ENST00000263274 KRBOX4Q5JUW0 171 aa11.13□□□□□ -0.63
LIG1-201ENST00000263274 EIF5AL1Q6IS14 154 aaKnown RBP11.13□□□□□ -0.63
LIG1-201ENST00000263274 PRSS54Q6PEW0 395 aa11.13□□□□□ -0.63
LIG1-201ENST00000263274 DOK3Q7L591 496 aa11.13□□□□□ -0.63
LIG1-201ENST00000263274 SMRP1Q8NCR6 262 aa11.13□□□□□ -0.63
LIG1-201ENST00000263274 OR4A4PQ8NGN8 299 aa11.13□□□□□ -0.63
LIG1-201ENST00000263274 RXFP4Q8TDU9 374 aa11.13□□□□□ -0.63
LIG1-201ENST00000263274 DYRK2Q92630 601 aa11.13□□□□□ -0.63
LIG1-201ENST00000263274 AKR1E2Q96JD6 320 aa11.13□□□□□ -0.63
LIG1-201ENST00000263274 NXT1Q9UKK6 140 aaKnown RBP11.13□□□□□ -0.63
LIG1-201ENST00000263274 E9PLN8 166 aa11.13□□□□□ -0.63
LIG1-201ENST00000263274 GDF9O60383 454 aa11.13□□□□□ -0.63
LIG1-201ENST00000263274 CELA2AP08217 269 aa11.13□□□□□ -0.63
LIG1-201ENST00000263274 PET100P0DJ07 73 aa11.13□□□□□ -0.63
LIG1-201ENST00000263274 QRFPP83859 136 aa11.13□□□□□ -0.63
LIG1-201ENST00000263274 ACY1Q03154 408 aa11.13□□□□□ -0.63
LIG1-201ENST00000263274 ZP4Q12836 540 aa11.13□□□□□ -0.63
LIG1-201ENST00000263274 Q6ZRG5 221 aa11.13□□□□□ -0.63
LIG1-201ENST00000263274 SLC25A45Q8N413 288 aa11.13□□□□□ -0.63
LIG1-201ENST00000263274 SEMA6DQ8NFY4 1073 aa11.13□□□□□ -0.63
LIG1-201ENST00000263274 OIT3Q8WWZ8 545 aa11.13□□□□□ -0.63
LIG1-201ENST00000263274 NMES1Q9C002 83 aa11.13□□□□□ -0.63
LIG1-201ENST00000263274 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.13□□□□□ -0.63
LIG1-201ENST00000263274 IGKV1-9A0A0C4DH69 117 aa11.13□□□□□ -0.63
LIG1-201ENST00000263274 MASP2O00187 686 aa11.13□□□□□ -0.63
LIG1-201ENST00000263274 GLB1P16278 677 aa11.13□□□□□ -0.63
LIG1-201ENST00000263274 RPL12P30050 165 aaKnown RBP11.13□□□□□ -0.63
LIG1-201ENST00000263274 FAHD2BQ6P2I3 314 aaPredicted RBP11.13□□□□□ -0.63
LIG1-201ENST00000263274 OGFOD3Q6PK18 319 aa11.13□□□□□ -0.63
LIG1-201ENST00000263274 UQCC3Q6UW78 93 aa11.13□□□□□ -0.63
LIG1-201ENST00000263274 FAHD2AQ96GK7 314 aa11.13□□□□□ -0.63
LIG1-201ENST00000263274 REEP6Q96HR9 211 aa11.13□□□□□ -0.63
LIG1-201ENST00000263274 RTBDNQ9BSG5 229 aaPredicted RBP11.13□□□□□ -0.63
LIG1-201ENST00000263274 FAAP24Q9BTP7 215 aa11.13□□□□□ -0.63
LIG1-201ENST00000263274 RARRES3Q9UL19 164 aa11.13□□□□□ -0.63
LIG1-201ENST00000263274 SPTBN2O15020 2390 aa11.12□□□□□ -0.63
LIG1-201ENST00000263274 RNASEK-C17orf49H0YIS7 233 aa11.12□□□□□ -0.63
LIG1-201ENST00000263274 ADAM10O14672 748 aa11.12□□□□□ -0.63
LIG1-201ENST00000263274 SFTA3P0C7M3 94 aa11.12□□□□□ -0.63
LIG1-201ENST00000263274 DAOP14920 347 aa11.12□□□□□ -0.63
LIG1-201ENST00000263274 TBPP20226 339 aa11.12□□□□□ -0.63
LIG1-201ENST00000263274 FPR2P25090 351 aa11.12□□□□□ -0.63
LIG1-201ENST00000263274 CFPP27918 469 aa11.12□□□□□ -0.63
LIG1-201ENST00000263274 P2RY4P51582 365 aa11.12□□□□□ -0.63
LIG1-201ENST00000263274 NXPH1P58417 271 aa11.12□□□□□ -0.63
LIG1-201ENST00000263274 CD300LFQ8TDQ1 290 aa11.12□□□□□ -0.63
LIG1-201ENST00000263274 C14orf79Q96F83 325 aa11.12□□□□□ -0.63
LIG1-201ENST00000263274 RAB18Q9NP72 206 aa11.12□□□□□ -0.63
LIG1-201ENST00000263274 GHRLQ9UBU3 117 aa11.12□□□□□ -0.63
LIG1-201ENST00000263274 SRPK3Q9UPE1 567 aa11.12□□□□□ -0.63
LIG1-201ENST00000263274 WIF1Q9Y5W5 379 aa11.12□□□□□ -0.63
LIG1-201ENST00000263274 FER1L5A0AVI2 2057 aa11.12□□□□□ -0.63
LIG1-201ENST00000263274 PTPRZ1P23471 2315 aaPredicted RBP11.12□□□□□ -0.63
LIG1-201ENST00000263274 IGKV1D-8A0A087WSZ0 117 aa11.12□□□□□ -0.63
LIG1-201ENST00000263274 TSPAN15O95858 294 aa11.12□□□□□ -0.63
LIG1-201ENST00000263274 PGA4P0DJD7 388 aa11.12□□□□□ -0.63
LIG1-201ENST00000263274 PGA3P0DJD8 388 aa11.12□□□□□ -0.63
LIG1-201ENST00000263274 S100PP25815 95 aa11.12□□□□□ -0.63
LIG1-201ENST00000263274 LPAR6P43657 344 aa11.12□□□□□ -0.63
LIG1-201ENST00000263274 TAS2R46P59540 309 aa11.12□□□□□ -0.63
LIG1-201ENST00000263274 SUPT4H1P63272 117 aaKnown RBP11.12□□□□□ -0.63
LIG1-201ENST00000263274 RSU1Q15404 277 aa11.12□□□□□ -0.63
LIG1-201ENST00000263274 PLPPR5Q32ZL2 321 aa11.12□□□□□ -0.63
LIG1-201ENST00000263274 MEX3BQ6ZN04 569 aaKnown RBP11.12□□□□□ -0.63
LIG1-201ENST00000263274 ZNF441Q8N8Z8 693 aa11.12□□□□□ -0.63
LIG1-201ENST00000263274 HSD17B11Q8NBQ5 300 aa11.12□□□□□ -0.63
LIG1-201ENST00000263274 PLPP5Q8NEB5 264 aa11.12□□□□□ -0.63
LIG1-201ENST00000263274 MRGPRX4Q96LA9 322 aa11.12□□□□□ -0.63
LIG1-201ENST00000263274 UCN2Q96RP3 112 aa11.12□□□□□ -0.63
LIG1-201ENST00000263274 MYOTQ9UBF9 498 aa11.12□□□□□ -0.63
LIG1-201ENST00000263274 LPAR3Q9UBY5 353 aa11.12□□□□□ -0.63
LIG1-201ENST00000263274 SHISA7A6NL88 538 aa11.11□□□□□ -0.63
LIG1-201ENST00000263274 BCAT2O15382 392 aaPredicted RBP11.11□□□□□ -0.63
LIG1-201ENST00000263274 TRAF3IP2O43734 574 aaPredicted RBP11.11□□□□□ -0.63
LIG1-201ENST00000263274 IFNA2P01563 188 aa11.11□□□□□ -0.63
LIG1-201ENST00000263274 LCATP04180 440 aa11.11□□□□□ -0.63
LIG1-201ENST00000263274 HPNP05981 417 aa11.11□□□□□ -0.63
LIG1-201ENST00000263274 PCP4P48539 62 aa11.11□□□□□ -0.63
LIG1-201ENST00000263274 RGS19P49795 217 aa11.11□□□□□ -0.63
LIG1-201ENST00000263274 EIF5AP63241 154 aaKnown RBP11.11□□□□□ -0.63
LIG1-201ENST00000263274 SECTM1Q8WVN6 248 aa11.11□□□□□ -0.63
LIG1-201ENST00000263274 PAPOLGQ9BWT3 736 aaKnown RBP11.11□□□□□ -0.63
LIG1-201ENST00000263274 PECRQ9BY49 303 aa11.11□□□□□ -0.63
LIG1-201ENST00000263274 MMP26Q9NRE1 261 aa11.11□□□□□ -0.63
LIG1-201ENST00000263274 CYTL1Q9NRR1 136 aa11.11□□□□□ -0.63
LIG1-201ENST00000263274 GPR27Q9NS67 375 aa11.11□□□□□ -0.63
LIG1-201ENST00000263274 SHANK1Q9Y566 2161 aa11.11□□□□□ -0.63
LIG1-201ENST00000263274 SMIM6P0DI80 62 aa11.11□□□□□ -0.63
LIG1-201ENST00000263274 DCDP81605 110 aaKnown RBP11.11□□□□□ -0.63
LIG1-201ENST00000263274 ACTBL2Q562R1 376 aa11.11□□□□□ -0.63
LIG1-201ENST00000263274 FAM180AQ6UWF9 173 aa11.11□□□□□ -0.63
LIG1-201ENST00000263274 CPEB2Q7Z5Q1 589 aaKnown RBP11.11□□□□□ -0.63
LIG1-201ENST00000263274 TMEM156Q8N614 296 aa11.11□□□□□ -0.63
LIG1-201ENST00000263274 SLC30A7Q8NEW0 376 aa11.11□□□□□ -0.63
LIG1-201ENST00000263274 POC1BQ8TC44 478 aa11.11□□□□□ -0.63
LIG1-201ENST00000263274 MRPL24Q96A35 216 aaKnown RBP11.11□□□□□ -0.63
LIG1-201ENST00000263274 OXGR1Q96P68 337 aa11.11□□□□□ -0.63
LIG1-201ENST00000263274 ZNF385AQ96PM9 386 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms