RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 DTX3Q8N9I9 347 aa10.05□□□□□ -0.8
TRAF4-202ENST00000262396 ZSCAN4Q8NAM6 433 aaPredicted RBP10.05□□□□□ -0.8
TRAF4-202ENST00000262396 OR4C13Q8NGP0 309 aa10.05□□□□□ -0.8
TRAF4-202ENST00000262396 YIPF3Q9GZM5 350 aa10.05□□□□□ -0.8
TRAF4-202ENST00000262396 RAB18Q9NP72 206 aa10.05□□□□□ -0.8
TRAF4-202ENST00000262396 TVP23BQ9NYZ1 205 aa10.05□□□□□ -0.8
TRAF4-202ENST00000262396 ENPP5Q9UJA9 477 aa10.05□□□□□ -0.8
TRAF4-202ENST00000262396 PIGLQ9Y2B2 252 aa10.05□□□□□ -0.8
TRAF4-202ENST00000262396 TRBV23-1A0A0A0MS06 115 aa10.04□□□□□ -0.8
TRAF4-202ENST00000262396 ACOD1A6NK06 481 aa10.04□□□□□ -0.8
TRAF4-202ENST00000262396 OR5B21A6NL26 309 aa10.04□□□□□ -0.8
TRAF4-202ENST00000262396 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.04□□□□□ -0.8
TRAF4-202ENST00000262396 PEX14O75381 377 aa10.04□□□□□ -0.8
TRAF4-202ENST00000262396 FAM107AO95990 144 aa10.04□□□□□ -0.8
TRAF4-202ENST00000262396 ATP6V1B1P15313 513 aa10.04□□□□□ -0.8
TRAF4-202ENST00000262396 CAV3P56539 151 aa10.04□□□□□ -0.8
TRAF4-202ENST00000262396 PROK1P58294 105 aa10.04□□□□□ -0.8
TRAF4-202ENST00000262396 SMIM21Q3B7S5 101 aa10.04□□□□□ -0.8
TRAF4-202ENST00000262396 CEACAM21Q3KPI0 293 aa10.04□□□□□ -0.8
TRAF4-202ENST00000262396 ASPHD2Q6ICH7 369 aa10.04□□□□□ -0.8
TRAF4-202ENST00000262396 C1orf122Q6ZSJ8 110 aa10.04□□□□□ -0.8
TRAF4-202ENST00000262396 ZNRF1Q8ND25 227 aa10.04□□□□□ -0.8
TRAF4-202ENST00000262396 OR5A2Q8NGI9 324 aa10.04□□□□□ -0.8
TRAF4-202ENST00000262396 OR2T6Q8NHC8 308 aa10.04□□□□□ -0.8
TRAF4-202ENST00000262396 ANGPTL6Q8NI99 470 aa10.04□□□□□ -0.8
TRAF4-202ENST00000262396 C8orf46Q8TAG6 207 aa10.04□□□□□ -0.8
TRAF4-202ENST00000262396 OR51E1Q8TCB6 317 aa10.04□□□□□ -0.8
TRAF4-202ENST00000262396 CANT1Q8WVQ1 401 aa10.04□□□□□ -0.8
TRAF4-202ENST00000262396 ASB17Q8WXJ9 295 aa10.04□□□□□ -0.8
TRAF4-202ENST00000262396 NKX3-1Q99801 234 aaPredicted RBP10.04□□□□□ -0.8
TRAF4-202ENST00000262396 SSX3Q99909 188 aa10.04□□□□□ -0.8
TRAF4-202ENST00000262396 TTTY10Q9BZA0 68 aa10.04□□□□□ -0.8
TRAF4-202ENST00000262396 PBOV1Q9GZY1 135 aa10.04□□□□□ -0.8
TRAF4-202ENST00000262396 C16orf95Q9H693 158 aa10.04□□□□□ -0.8
TRAF4-202ENST00000262396 HEXA-AS1Q9H8Q6 139 aa10.04□□□□□ -0.8
TRAF4-202ENST00000262396 ELL3Q9HB65 397 aaPredicted RBP10.04□□□□□ -0.8
TRAF4-202ENST00000262396 RASL12Q9NYN1 266 aa10.04□□□□□ -0.8
TRAF4-202ENST00000262396 MEGF8Q7Z7M0 2845 aa10.04□□□□□ -0.8
TRAF4-202ENST00000262396 AQP12BA6NM10 295 aa10.03□□□□□ -0.8
TRAF4-202ENST00000262396 ZNF254O75437 659 aa10.03□□□□□ -0.8
TRAF4-202ENST00000262396 FCN3O75636 299 aa10.03□□□□□ -0.8
TRAF4-202ENST00000262396 RHBDL1O75783 438 aa10.03□□□□□ -0.8
TRAF4-202ENST00000262396 NXPH2O95156 264 aa10.03□□□□□ -0.8
TRAF4-202ENST00000262396 NRASP01111 189 aa10.03□□□□□ -0.8
TRAF4-202ENST00000262396 PSG2P11465 335 aa10.03□□□□□ -0.8
TRAF4-202ENST00000262396 ALOX5APP20292 161 aa10.03□□□□□ -0.8
TRAF4-202ENST00000262396 PRKACGP22612 351 aa10.03□□□□□ -0.8
TRAF4-202ENST00000262396 COX7A1P24310 79 aa10.03□□□□□ -0.8
TRAF4-202ENST00000262396 HCCSP53701 268 aa10.03□□□□□ -0.8
TRAF4-202ENST00000262396 RPL31P62899 125 aaKnown RBP10.03□□□□□ -0.8
TRAF4-202ENST00000262396 FLOT2Q14254 428 aa10.03□□□□□ -0.8
TRAF4-202ENST00000262396 OCLNQ16625 522 aa10.03□□□□□ -0.8
TRAF4-202ENST00000262396 TMEM236Q5W0B7 351 aa10.03□□□□□ -0.8
TRAF4-202ENST00000262396 SLC35E4Q6ICL7 350 aa10.03□□□□□ -0.8
TRAF4-202ENST00000262396 DEGS2Q6QHC5 323 aa10.03□□□□□ -0.8
TRAF4-202ENST00000262396 ZNF573Q86YE8 665 aa10.03□□□□□ -0.8
TRAF4-202ENST00000262396 C1QL4Q86Z23 238 aa10.03□□□□□ -0.8
TRAF4-202ENST00000262396 AQP12AQ8IXF9 295 aa10.03□□□□□ -0.8
TRAF4-202ENST00000262396 ADGRG5Q8IZF4 528 aa10.03□□□□□ -0.8
TRAF4-202ENST00000262396 Q8N7P7 452 aa10.03□□□□□ -0.8
TRAF4-202ENST00000262396 BBS1Q8NFJ9 593 aa10.03□□□□□ -0.8
TRAF4-202ENST00000262396 HPSE2Q8WWQ2 592 aa10.03□□□□□ -0.8
TRAF4-202ENST00000262396 ITFG2Q969R8 447 aa10.03□□□□□ -0.8
TRAF4-202ENST00000262396 LYZL4Q96KX0 146 aa10.03□□□□□ -0.8
TRAF4-202ENST00000262396 CNN2Q99439 309 aaKnown RBP10.03□□□□□ -0.8
TRAF4-202ENST00000262396 GPR84Q9NQS5 396 aa10.03□□□□□ -0.8
TRAF4-202ENST00000262396 ABCB10Q9NRK6 738 aa10.03□□□□□ -0.8
TRAF4-202ENST00000262396 OR14J1Q9UGF5 321 aa10.03□□□□□ -0.8
TRAF4-202ENST00000262396 POLDIP2Q9Y2S7 368 aa10.03□□□□□ -0.8
TRAF4-202ENST00000262396 KLHDC2Q9Y2U9 406 aa10.03□□□□□ -0.8
TRAF4-202ENST00000262396 TRRAPQ9Y4A5 3859 aa10.02□□□□□ -0.81
TRAF4-202ENST00000262396 A0A0U1RQV5 110 aa10.02□□□□□ -0.81
TRAF4-202ENST00000262396 RFPL4AA6NLU0 287 aa10.02□□□□□ -0.81
TRAF4-202ENST00000262396 ZNF670-ZNF695F2Z2N8 137 aa10.02□□□□□ -0.81
TRAF4-202ENST00000262396 LOC110117498-PIK3R3F6TDL0 507 aa10.02□□□□□ -0.81
TRAF4-202ENST00000262396 RFPL4AL1F8VTS6 287 aa10.02□□□□□ -0.81
TRAF4-202ENST00000262396 H3BUI4 141 aa10.02□□□□□ -0.81
TRAF4-202ENST00000262396 GYG2O15488 501 aa10.02□□□□□ -0.81
TRAF4-202ENST00000262396 TSPAN9O75954 239 aa10.02□□□□□ -0.81
TRAF4-202ENST00000262396 FAHP16930 419 aa10.02□□□□□ -0.81
TRAF4-202ENST00000262396 AMY2BP19961 511 aa10.02□□□□□ -0.81
TRAF4-202ENST00000262396 HAAOP46952 286 aa10.02□□□□□ -0.81
TRAF4-202ENST00000262396 KRTAP10-3P60369 221 aa10.02□□□□□ -0.81
TRAF4-202ENST00000262396 CDK5Q00535 292 aa10.02□□□□□ -0.81
TRAF4-202ENST00000262396 LRRC75BQ2VPJ9 315 aa10.02□□□□□ -0.81
TRAF4-202ENST00000262396 DNAL1Q4LDG9 190 aa10.02□□□□□ -0.81
TRAF4-202ENST00000262396 DMRTC1Q5HYR2 192 aa10.02□□□□□ -0.81
TRAF4-202ENST00000262396 BCL2L15Q5TBC7 163 aa10.02□□□□□ -0.81
TRAF4-202ENST00000262396 ASRGL1Q7L266 308 aa10.02□□□□□ -0.81
TRAF4-202ENST00000262396 ZNF679Q8IYX0 411 aa10.02□□□□□ -0.81
TRAF4-202ENST00000262396 BEND2Q8NDZ0 799 aa10.02□□□□□ -0.81
TRAF4-202ENST00000262396 OR4M1Q8NGD0 313 aa10.02□□□□□ -0.81
TRAF4-202ENST00000262396 OR2T27Q8NH04 317 aa10.02□□□□□ -0.81
TRAF4-202ENST00000262396 DNAJC9Q8WXX5 260 aa10.02□□□□□ -0.81
TRAF4-202ENST00000262396 ADI1Q9BV57 179 aa10.02□□□□□ -0.81
TRAF4-202ENST00000262396 NPFFR1Q9GZQ6 430 aa10.02□□□□□ -0.81
TRAF4-202ENST00000262396 OR51I2Q9H344 312 aa10.02□□□□□ -0.81
TRAF4-202ENST00000262396 PLEKHA1Q9HB21 404 aa10.02□□□□□ -0.81
TRAF4-202ENST00000262396 PAPOLBQ9NRJ5 636 aaKnown RBP10.02□□□□□ -0.81
TRAF4-202ENST00000262396 DNAJB9Q9UBS3 223 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms