RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 F2RL1P55085 397 aa14.23□□□□□ -0.13
SNCAIP-202ENST00000261368 SUPT4H1P63272 117 aaKnown RBP14.23□□□□□ -0.13
SNCAIP-202ENST00000261368 ZNF501Q96CX3 271 aaPredicted RBP14.23□□□□□ -0.13
SNCAIP-202ENST00000261368 OXGR1Q96P68 337 aa14.23□□□□□ -0.13
SNCAIP-202ENST00000261368 CLCC1Q96S66 551 aa14.23□□□□□ -0.13
SNCAIP-202ENST00000261368 SEC11CQ9BY50 192 aa14.23□□□□□ -0.13
SNCAIP-202ENST00000261368 ZNF442Q9H7R0 627 aa14.23□□□□□ -0.13
SNCAIP-202ENST00000261368 SMCO4Q9NRQ5 59 aa14.23□□□□□ -0.13
SNCAIP-202ENST00000261368 IGKV1-9A0A0C4DH69 117 aa14.23□□□□□ -0.13
SNCAIP-202ENST00000261368 M0R135 149 aa14.23□□□□□ -0.13
SNCAIP-202ENST00000261368 PTGER4P35408 488 aa14.23□□□□□ -0.13
SNCAIP-202ENST00000261368 GRB2P62993 217 aaKnown RBP14.23□□□□□ -0.13
SNCAIP-202ENST00000261368 PNLIPRP3Q17RR3 467 aa14.23□□□□□ -0.13
SNCAIP-202ENST00000261368 PLPPR5Q32ZL2 321 aa14.23□□□□□ -0.13
SNCAIP-202ENST00000261368 MIDNQ504T8 468 aa14.23□□□□□ -0.13
SNCAIP-202ENST00000261368 VAX1Q5SQQ9 334 aa14.23□□□□□ -0.13
SNCAIP-202ENST00000261368 GJC3Q8NFK1 279 aa14.23□□□□□ -0.13
SNCAIP-202ENST00000261368 ZNF799Q96GE5 643 aa14.23□□□□□ -0.13
SNCAIP-202ENST00000261368 PRRX2Q99811 253 aa14.23□□□□□ -0.13
SNCAIP-202ENST00000261368 MYOTQ9UBF9 498 aa14.23□□□□□ -0.13
SNCAIP-202ENST00000261368 PUS1Q9Y606 427 aaKnown RBP eCLIP14.23□□□□□ -0.13
SNCAIP-202ENST00000261368 NCOA6Q14686 2063 aaPredicted RBP14.22□□□□□ -0.13
SNCAIP-202ENST00000261368 GLB1P16278 677 aa14.22□□□□□ -0.13
SNCAIP-202ENST00000261368 MSR1P21757 451 aa14.22□□□□□ -0.13
SNCAIP-202ENST00000261368 LTBRP36941 435 aa14.22□□□□□ -0.13
SNCAIP-202ENST00000261368 HERV-K104P61576 105 aa14.22□□□□□ -0.13
SNCAIP-202ENST00000261368 DCDP81605 110 aaKnown RBP14.22□□□□□ -0.13
SNCAIP-202ENST00000261368 ECH1Q13011 328 aa14.22□□□□□ -0.13
SNCAIP-202ENST00000261368 SHEQ5VZ18 495 aa14.22□□□□□ -0.13
SNCAIP-202ENST00000261368 FAM213BQ8TBF2 198 aa14.22□□□□□ -0.13
SNCAIP-202ENST00000261368 SPTBN5Q9NRC6 3674 aaKnown RBP14.22□□□□□ -0.13
SNCAIP-202ENST00000261368 DHRS7CA6NNS2 312 aa14.22□□□□□ -0.13
SNCAIP-202ENST00000261368 ZNF728P0DKX0 622 aa14.22□□□□□ -0.13
SNCAIP-202ENST00000261368 FHITP49789 147 aa14.22□□□□□ -0.13
SNCAIP-202ENST00000261368 FBXW12Q6X9E4 464 aa14.22□□□□□ -0.13
SNCAIP-202ENST00000261368 BORCS8Q96FH0 119 aa14.22□□□□□ -0.13
SNCAIP-202ENST00000261368 UCN2Q96RP3 112 aa14.22□□□□□ -0.13
SNCAIP-202ENST00000261368 PARPBPQ9NWS1 579 aa14.22□□□□□ -0.13
SNCAIP-202ENST00000261368 IGKV1D-8A0A087WSZ0 117 aa14.22□□□□□ -0.13
SNCAIP-202ENST00000261368 H3BMH7 237 aa14.22□□□□□ -0.13
SNCAIP-202ENST00000261368 MFNGO00587 321 aa14.22□□□□□ -0.13
SNCAIP-202ENST00000261368 BCAT2O15382 392 aaPredicted RBP14.22□□□□□ -0.13
SNCAIP-202ENST00000261368 ZNHIT1O43257 154 aa14.22□□□□□ -0.13
SNCAIP-202ENST00000261368 FGF16O43320 207 aa14.22□□□□□ -0.13
SNCAIP-202ENST00000261368 TNFSF12O43508 249 aa14.22□□□□□ -0.13
SNCAIP-202ENST00000261368 TRAF3IP2O43734 574 aaPredicted RBP14.22□□□□□ -0.13
SNCAIP-202ENST00000261368 ZNF44P15621 663 aa14.22□□□□□ -0.13
SNCAIP-202ENST00000261368 NAAAQ02083 359 aa14.22□□□□□ -0.13
SNCAIP-202ENST00000261368 BCL2L14Q9BZR8 327 aa14.22□□□□□ -0.13
SNCAIP-202ENST00000261368 A0A1W2PR77 199 aa14.21□□□□□ -0.13
SNCAIP-202ENST00000261368 TP53I11O14683 189 aa14.21□□□□□ -0.13
SNCAIP-202ENST00000261368 CELA2AP08217 269 aa14.21□□□□□ -0.13
SNCAIP-202ENST00000261368 NXPH1P58417 271 aa14.21□□□□□ -0.13
SNCAIP-202ENST00000261368 UBE2V2Q15819 145 aa14.21□□□□□ -0.13
SNCAIP-202ENST00000261368 SLC25A24Q6NUK1 477 aa14.21□□□□□ -0.13
SNCAIP-202ENST00000261368 PLPP5Q8NEB5 264 aa14.21□□□□□ -0.13
SNCAIP-202ENST00000261368 SFT2D1Q8WV19 159 aa14.21□□□□□ -0.13
SNCAIP-202ENST00000261368 USB1Q9BQ65 265 aaKnown RBP14.21□□□□□ -0.13
SNCAIP-202ENST00000261368 CNTNAP3Q9BZ76 1288 aa14.21□□□□□ -0.13
SNCAIP-202ENST00000261368 FAM212BQ9NTI7 297 aaPredicted RBP14.21□□□□□ -0.13
SNCAIP-202ENST00000261368 RCC2Q9P258 522 aaKnown RBP14.21□□□□□ -0.13
SNCAIP-202ENST00000261368 HSPB6O14558 160 aa14.21□□□□□ -0.13
SNCAIP-202ENST00000261368 PHF1O43189 567 aaPredicted RBP14.21□□□□□ -0.13
SNCAIP-202ENST00000261368 ZNF385AQ96PM9 386 aaKnown RBP14.21□□□□□ -0.13
SNCAIP-202ENST00000261368 SLC5A7Q9GZV3 580 aa14.21□□□□□ -0.13
SNCAIP-202ENST00000261368 AKIRIN1Q9H9L7 192 aaPredicted RBP14.21□□□□□ -0.13
SNCAIP-202ENST00000261368 FANCFQ9NPI8 374 aa14.21□□□□□ -0.13
SNCAIP-202ENST00000261368 SHANK1Q9Y566 2161 aa14.21□□□□□ -0.13
SNCAIP-202ENST00000261368 F8VVB4 439 aa14.2□□□□□ -0.14
SNCAIP-202ENST00000261368 F8VWA3 439 aa14.2□□□□□ -0.14
SNCAIP-202ENST00000261368 JTBO76095 146 aa14.2□□□□□ -0.14
SNCAIP-202ENST00000261368 CD79AP11912 226 aa14.2□□□□□ -0.14
SNCAIP-202ENST00000261368 GSK3AP49840 483 aa14.2□□□□□ -0.14
SNCAIP-202ENST00000261368 ZNF84P51523 738 aa14.2□□□□□ -0.14
SNCAIP-202ENST00000261368 ZNF441Q8N8Z8 693 aa14.2□□□□□ -0.14
SNCAIP-202ENST00000261368 GLYATL2Q8WU03 294 aa14.2□□□□□ -0.14
SNCAIP-202ENST00000261368 RTN4IP1Q8WWV3 396 aaPredicted RBP14.2□□□□□ -0.14
SNCAIP-202ENST00000261368 SPTSSAQ969W0 71 aa14.2□□□□□ -0.14
SNCAIP-202ENST00000261368 RSRP1Q9BUV0 290 aa14.2□□□□□ -0.14
SNCAIP-202ENST00000261368 KCNJ16Q9NPI9 418 aa14.2□□□□□ -0.14
SNCAIP-202ENST00000261368 MCTS1Q9ULC4 181 aaKnown RBP14.2□□□□□ -0.14
SNCAIP-202ENST00000261368 E9PLN8 166 aa14.2□□□□□ -0.14
SNCAIP-202ENST00000261368 TRAPPC6AO75865 159 aa14.2□□□□□ -0.14
SNCAIP-202ENST00000261368 OR7C1O76099 320 aaPredicted RBP14.2□□□□□ -0.14
SNCAIP-202ENST00000261368 CST4P01036 141 aa14.2□□□□□ -0.14
SNCAIP-202ENST00000261368 ARG1P05089 322 aa14.2□□□□□ -0.14
SNCAIP-202ENST00000261368 OR5AC1P0C628 307 aa14.2□□□□□ -0.14
SNCAIP-202ENST00000261368 HKR1P10072 659 aa14.2□□□□□ -0.14
SNCAIP-202ENST00000261368 HOXA1P49639 335 aaPredicted RBP14.2□□□□□ -0.14
SNCAIP-202ENST00000261368 SRSF4Q08170 494 aaKnown RBP14.2□□□□□ -0.14
SNCAIP-202ENST00000261368 DHRS11Q6UWP2 260 aa14.2□□□□□ -0.14
SNCAIP-202ENST00000261368 PIGQQ9BRB3 760 aa14.2□□□□□ -0.14
SNCAIP-202ENST00000261368 METTL9Q9H1A3 318 aa14.2□□□□□ -0.14
SNCAIP-202ENST00000261368 UCK1Q9HA47 277 aa14.2□□□□□ -0.14
SNCAIP-202ENST00000261368 FSCN3Q9NQT6 498 aa14.2□□□□□ -0.14
SNCAIP-202ENST00000261368 F10P00742 488 aa14.2□□□□□ -0.14
SNCAIP-202ENST00000261368 IGHV3-9P01782 118 aa14.2□□□□□ -0.14
SNCAIP-202ENST00000261368 GLP1RP43220 463 aa14.2□□□□□ -0.14
SNCAIP-202ENST00000261368 MEOX2P50222 304 aa14.2□□□□□ -0.14
SNCAIP-202ENST00000261368 SUMO3P55854 103 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms