RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 TRAF4Q9BUZ4 470 aaPredicted RBP23.9■■□□□ 1.42
CCM2-201ENST00000258781 ELL3Q9HB65 397 aaPredicted RBP23.9■■□□□ 1.42
CCM2-201ENST00000258781 BEX1Q9HBH7 125 aa23.9■■□□□ 1.42
CCM2-201ENST00000258781 IFT46Q9NQC8 304 aa23.9■■□□□ 1.42
CCM2-201ENST00000258781 ANAPC10Q9UM13 185 aa23.9■■□□□ 1.42
CCM2-201ENST00000258781 IGHV1-2P23083 117 aa23.9■■□□□ 1.42
CCM2-201ENST00000258781 PLCXD3Q63HM9 321 aa23.9■■□□□ 1.42
CCM2-201ENST00000258781 FAM180AQ6UWF9 173 aa23.9■■□□□ 1.42
CCM2-201ENST00000258781 Q6ZT83 130 aa23.9■■□□□ 1.42
CCM2-201ENST00000258781 MOB3CQ70IA8 216 aa23.9■■□□□ 1.42
CCM2-201ENST00000258781 MRPL21Q7Z2W9 205 aaKnown RBP23.9■■□□□ 1.42
CCM2-201ENST00000258781 NOXA1Q86UR1 476 aa23.9■■□□□ 1.42
CCM2-201ENST00000258781 MDP1Q86V88 176 aa23.9■■□□□ 1.42
CCM2-201ENST00000258781 BEST4Q8NFU0 473 aa23.9■■□□□ 1.42
CCM2-201ENST00000258781 OR10K1Q8NGX5 313 aa23.9■■□□□ 1.42
CCM2-201ENST00000258781 PIGCQ92535 297 aa23.9■■□□□ 1.42
CCM2-201ENST00000258781 ZNF486Q96H40 463 aaPredicted RBP23.9■■□□□ 1.42
CCM2-201ENST00000258781 ZNF75AQ96N20 296 aa23.9■■□□□ 1.42
CCM2-201ENST00000258781 PRORYQ9H606 182 aa23.9■■□□□ 1.42
CCM2-201ENST00000258781 KCNK7Q9Y2U2 307 aa23.9■■□□□ 1.42
CCM2-201ENST00000258781 PYCARD-AS1I3L0S3 204 aa23.89■■□□□ 1.41
CCM2-201ENST00000258781 TBPP20226 339 aa23.89■■□□□ 1.41
CCM2-201ENST00000258781 RAD52P43351 418 aa23.89■■□□□ 1.41
CCM2-201ENST00000258781 ARL6IP1Q15041 203 aa23.89■■□□□ 1.41
CCM2-201ENST00000258781 ZNF324BQ6AW86 544 aaPredicted RBP23.89■■□□□ 1.41
CCM2-201ENST00000258781 LIX1LQ8IVB5 337 aa23.89■■□□□ 1.41
CCM2-201ENST00000258781 PIAS4Q8N2W9 510 aaPredicted RBP23.89■■□□□ 1.41
CCM2-201ENST00000258781 KDF1Q8NAX2 398 aaPredicted RBP23.89■■□□□ 1.41
CCM2-201ENST00000258781 OR11H7Q8NGC8 314 aa23.89■■□□□ 1.41
CCM2-201ENST00000258781 TINAGL1Q9GZM7 467 aaPredicted RBP23.89■■□□□ 1.41
CCM2-201ENST00000258781 GPN1Q9HCN4 374 aaPredicted RBP23.89■■□□□ 1.41
CCM2-201ENST00000258781 SPTA1P02549 2419 aa23.89■■□□□ 1.41
CCM2-201ENST00000258781 M0QYG6 137 aa23.88■■□□□ 1.41
CCM2-201ENST00000258781 HPXP02790 462 aa23.88■■□□□ 1.41
CCM2-201ENST00000258781 AMY2AP04746 511 aa23.88■■□□□ 1.41
CCM2-201ENST00000258781 ZNF735P0CB33 412 aa23.88■■□□□ 1.41
CCM2-201ENST00000258781 SULT1A3P0DMM9 295 aa23.88■■□□□ 1.41
CCM2-201ENST00000258781 SULT1A4P0DMN0 295 aa23.88■■□□□ 1.41
CCM2-201ENST00000258781 MPZP25189 248 aa23.88■■□□□ 1.41
CCM2-201ENST00000258781 KIR2DL2P43627 348 aaPredicted RBP23.88■■□□□ 1.41
CCM2-201ENST00000258781 NSUN5P2Q63ZY6 315 aa23.88■■□□□ 1.41
CCM2-201ENST00000258781 CISD2Q8N5K1 135 aaKnown RBP23.88■■□□□ 1.41
CCM2-201ENST00000258781 OR56B2PQ8NGI1 322 aa23.88■■□□□ 1.41
CCM2-201ENST00000258781 ARHGAP5-AS1Q96IT6 56 aa23.88■■□□□ 1.41
CCM2-201ENST00000258781 STARD10Q9Y365 291 aa23.88■■□□□ 1.41
CCM2-201ENST00000258781 TMEM8BA6NDV4 472 aa23.87■■□□□ 1.41
CCM2-201ENST00000258781 SSNA1O43805 119 aa23.87■■□□□ 1.41
CCM2-201ENST00000258781 C1QBP02746 253 aa23.87■■□□□ 1.41
CCM2-201ENST00000258781 SF3B4Q15427 424 aaKnown RBP eCLIP23.87■■□□□ 1.41
CCM2-201ENST00000258781 RTN4RL2Q86UN3 420 aa23.87■■□□□ 1.41
CCM2-201ENST00000258781 CSNK2A3Q8NEV1 391 aa23.87■■□□□ 1.41
CCM2-201ENST00000258781 SLC25A21Q9BQT8 299 aaPredicted RBP23.87■■□□□ 1.41
CCM2-201ENST00000258781 SCP2D1Q9UJQ7 156 aa23.87■■□□□ 1.41
CCM2-201ENST00000258781 SNRPGP15A8MWD9 76 aa23.87■■□□□ 1.41
CCM2-201ENST00000258781 DISC1C4P0D8 188 aa23.87■■□□□ 1.41
CCM2-201ENST00000258781 ZNF780AO75290 641 aaPredicted RBP23.87■■□□□ 1.41
CCM2-201ENST00000258781 NAT1P18440 290 aa23.87■■□□□ 1.41
CCM2-201ENST00000258781 ANXA7P20073 488 aaKnown RBP23.87■■□□□ 1.41
CCM2-201ENST00000258781 CBX5P45973 191 aa23.87■■□□□ 1.41
CCM2-201ENST00000258781 ZMYND11Q15326 602 aa23.87■■□□□ 1.41
CCM2-201ENST00000258781 RSU1Q15404 277 aa23.87■■□□□ 1.41
CCM2-201ENST00000258781 RNASE10Q5GAN6 216 aaKnown RBP23.87■■□□□ 1.41
CCM2-201ENST00000258781 BPIFB2Q8N4F0 458 aa23.87■■□□□ 1.41
CCM2-201ENST00000258781 CNEP1R1Q8N9A8 125 aa23.87■■□□□ 1.41
CCM2-201ENST00000258781 SLC30A7Q8NEW0 376 aa23.87■■□□□ 1.41
CCM2-201ENST00000258781 PXT1Q8NFP0 134 aa23.87■■□□□ 1.41
CCM2-201ENST00000258781 Q96M66 194 aa23.87■■□□□ 1.41
CCM2-201ENST00000258781 SLC2A8Q9NY64 477 aa23.87■■□□□ 1.41
CCM2-201ENST00000258781 IL36GQ9NZH8 169 aa23.87■■□□□ 1.41
CCM2-201ENST00000258781 CST4P01036 141 aa23.86■■□□□ 1.41
CCM2-201ENST00000258781 HOXB1P14653 301 aaPredicted RBP23.86■■□□□ 1.41
CCM2-201ENST00000258781 GVQW1Q8N7I0 195 aa23.86■■□□□ 1.41
CCM2-201ENST00000258781 OR4S1Q8NGB4 309 aa23.86■■□□□ 1.41
CCM2-201ENST00000258781 MS4A3Q96HJ5 214 aa23.86■■□□□ 1.41
CCM2-201ENST00000258781 BOD1Q96IK1 185 aa23.86■■□□□ 1.41
CCM2-201ENST00000258781 PTTG3PQ9NZH4 202 aa23.86■■□□□ 1.41
CCM2-201ENST00000258781 PLEKHA6Q9Y2H5 1048 aa23.86■■□□□ 1.41
CCM2-201ENST00000258781 CA11O75493 328 aa23.85■■□□□ 1.41
CCM2-201ENST00000258781 NGFP01138 241 aa23.85■■□□□ 1.41
CCM2-201ENST00000258781 BLVRBP30043 206 aaPredicted RBP23.85■■□□□ 1.41
CCM2-201ENST00000258781 WNT5AP41221 380 aa23.85■■□□□ 1.41
CCM2-201ENST00000258781 UBE2NP61088 152 aaKnown RBP23.85■■□□□ 1.41
CCM2-201ENST00000258781 PRR30Q53SZ7 412 aaPredicted RBP23.85■■□□□ 1.41
CCM2-201ENST00000258781 IDO2Q6ZQW0 420 aa23.85■■□□□ 1.41
CCM2-201ENST00000258781 SLC36A1Q7Z2H8 476 aa23.85■■□□□ 1.41
CCM2-201ENST00000258781 OCSTAMPQ9BR26 566 aa23.85■■□□□ 1.41
CCM2-201ENST00000258781 RP1L1Q8IWN7 2480 aaPredicted RBP23.85■■□□□ 1.41
CCM2-201ENST00000258781 ZNF850A8MQ14 1090 aa23.85■■□□□ 1.41
CCM2-201ENST00000258781 J3QW42 95 aa23.85■■□□□ 1.41
CCM2-201ENST00000258781 SPRY1O43609 319 aaPredicted RBP23.85■■□□□ 1.41
CCM2-201ENST00000258781 RAD51DO75771 328 aa23.85■■□□□ 1.41
CCM2-201ENST00000258781 CSTBP04080 98 aaKnown RBP23.85■■□□□ 1.41
CCM2-201ENST00000258781 ANXA3P12429 323 aa23.85■■□□□ 1.41
CCM2-201ENST00000258781 COX5AP20674 150 aa23.85■■□□□ 1.41
CCM2-201ENST00000258781 TDGF1P3P51864 188 aa23.85■■□□□ 1.41
CCM2-201ENST00000258781 GABRA6Q16445 453 aa23.85■■□□□ 1.41
CCM2-201ENST00000258781 RTL6Q6ICC9 239 aa23.85■■□□□ 1.41
CCM2-201ENST00000258781 ZGRF1Q86YA3 2104 aa23.85■■□□□ 1.41
CCM2-201ENST00000258781 FTMTQ8N4E7 242 aa23.85■■□□□ 1.41
CCM2-201ENST00000258781 OR5L1Q8NGL2 311 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms