RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 PLAC9Q5JTB6 97 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 ASPHD2Q6ICH7 369 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 Q7L0L9 218 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 SLC16A14Q7RTX9 510 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 STX12Q86Y82 276 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 FBXL14Q8N1E6 418 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 PAPOLGQ9BWT3 736 aaKnown RBP4.18□□□□□ -1.74
USP44-201ENST00000258499 FAM117AQ9C073 453 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 MED9Q9NWA0 146 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 AUP1Q9Y679 476 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 LHFPL6Q9Y693 200 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 PRUNE2Q8WUY3 3088 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 IGHV3-64DA0A0J9YX35 117 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 ZNF98A6NK75 572 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 TNFSF11O14788 317 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 DHHO43323 396 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 C1QL1O75973 258 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 CNOT4O95628 575 aaKnown RBP4.18□□□□□ -1.74
USP44-201ENST00000258499 P04436 131 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 KLK2P20151 261 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 MSX1P28360 303 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 DUSP1P28562 367 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 F2RL1P55085 397 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 SOHLH1Q5JUK2 328 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 GGNBP1Q5YKI7 109 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 AAED1Q7RTV5 226 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 C1QL2Q7Z5L3 287 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 HOGA1Q86XE5 327 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 MCEMP1Q8IX19 187 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 MAML2Q8IZL2 1156 aaPredicted RBP4.18□□□□□ -1.74
USP44-201ENST00000258499 PAQR4Q8N4S7 273 aaPredicted RBP4.18□□□□□ -1.74
USP44-201ENST00000258499 SUMF2Q8NBJ7 301 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 OR13G1Q8NGZ3 307 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 MRPL24Q96A35 216 aaKnown RBP4.18□□□□□ -1.74
USP44-201ENST00000258499 RNF166Q96A37 237 aaPredicted RBP4.18□□□□□ -1.74
USP44-201ENST00000258499 SPACA9Q96E40 222 aaPredicted RBP4.18□□□□□ -1.74
USP44-201ENST00000258499 RRNAD1Q96FB5 475 aaKnown RBP4.18□□□□□ -1.74
USP44-201ENST00000258499 ZNF845Q96IR2 970 aaPredicted RBP4.18□□□□□ -1.74
USP44-201ENST00000258499 KIRREL1Q96J84 757 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 PRRX2Q99811 253 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 ZNF286AQ9HBT8 521 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 RALGAPA1Q6GYQ0 2036 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 CACNA1DQ01668 2161 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 NSG1A0A0A6YYJ2 146 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 UMAD1C9J7I0 102 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 MASP2O00187 686 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 CLPSP04118 112 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 ARG1P05089 322 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 ISG15P05161 165 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 HPNP05981 417 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 CELA2AP08217 269 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 OR5AC1P0C628 307 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 IGFBP3P17936 291 aaPredicted RBP4.18□□□□□ -1.74
USP44-201ENST00000258499 RFC3P40938 356 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 EIF1P41567 113 aaKnown RBP4.18□□□□□ -1.74
USP44-201ENST00000258499 EFNA3P52797 238 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 NXPH1P58417 271 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 DMWDQ09019 674 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 CNN3Q15417 329 aaKnown RBP4.18□□□□□ -1.74
USP44-201ENST00000258499 COL13A1Q5TAT6 717 aaPredicted RBP4.18□□□□□ -1.74
USP44-201ENST00000258499 FAHD2BQ6P2I3 314 aaPredicted RBP4.18□□□□□ -1.74
USP44-201ENST00000258499 OPN5Q6U736 354 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 SLC16A13Q7RTY0 426 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 D2HGDHQ8N465 521 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 TCEAL3Q969E4 200 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 FAHD2AQ96GK7 314 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 SGCZQ96LD1 299 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 ZNF385AQ96PM9 386 aaKnown RBP4.18□□□□□ -1.74
USP44-201ENST00000258499 NMES1Q9C002 83 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 FANCFQ9NPI8 374 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 NECAP2Q9NVZ3 263 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 GPR132Q9UNW8 380 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 IGKV3D-11A0A0A0MRZ8 115 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 SERPINE3A8MV23 424 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 H0YIZ8 118 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 H3BP45 60 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 ST8SIA3O43173 380 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 NPIPB7O75200 414 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 CST7O76096 145 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 TIAF1O95411 115 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 CD37P11049 281 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 CD79AP11912 226 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 TUBG1P23258 451 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 CXCL12P48061 93 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 RBP2P50120 134 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 SUMO3P55854 103 aaPredicted RBP4.18□□□□□ -1.74
USP44-201ENST00000258499 SMAD4Q13485 552 aaKnown RBP4.18□□□□□ -1.74
USP44-201ENST00000258499 SHBQ15464 509 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 TGIF1Q15583 401 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 HAGHQ16775 308 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 ZNF674Q2M3X9 581 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 AKR1C8PQ5T2L2 129 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 GPR157Q5UAW9 335 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 TMEM268Q5VZI3 342 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 TCEAL6Q6IPX3 200 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 PLXDC2Q6UX71 529 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 ETV3LQ6ZN32 361 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 CCDC71LQ8N9Z2 235 aa4.18□□□□□ -1.74
USP44-201ENST00000258499 ZFP62Q8NB50 900 aaPredicted RBP4.18□□□□□ -1.74
USP44-201ENST00000258499 RXFP4Q8TDU9 374 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms