RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 FAM90A16PA6NEW6 464 aa11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 FAM90A20PA6NIJ5 464 aa11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 FAM90A8PA6NJQ4 464 aa11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 FAM90A7PA6NKC0 464 aa11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 FAM90A22PA8MWA6 464 aa11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 FAM90A12PA8MX19 464 aa11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 FAM90A5PA8MXJ8 464 aa11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 FAM90A23PA8MXZ1 464 aa11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 FAM90A15PP0C7V4 464 aa11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 FAM90A13PP0C7W8 464 aa11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 FAM90A14PP0C7W9 464 aa11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 FAM90A24PP0C7X0 464 aa11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 ZNF26P17031 533 aaPredicted RBP11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 UCP2P55851 309 aa11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 BAXQ07812 192 aa11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 C17orf82Q86X59 251 aaPredicted RBP11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 DYNC2LI1Q8TCX1 351 aa11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 SSC4DQ8WTU2 575 aa11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 DHRS9Q9BPW9 319 aa11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 PDCD6O75340 191 aa11.83□□□□□ -0.52
PRPF38A-201ENST00000257181 CA5AP35218 305 aa11.83□□□□□ -0.52
PRPF38A-201ENST00000257181 SPATA46Q5T0L3 261 aa11.83□□□□□ -0.52
PRPF38A-201ENST00000257181 NUDT8Q8WV74 236 aa11.83□□□□□ -0.52
PRPF38A-201ENST00000257181 HGDQ93099 445 aa11.83□□□□□ -0.52
PRPF38A-201ENST00000257181 FAM131CQ96AQ9 280 aa11.83□□□□□ -0.52
PRPF38A-201ENST00000257181 RBMXL1Q96E39 390 aaKnown RBP11.83□□□□□ -0.52
PRPF38A-201ENST00000257181 KCNE3Q9Y6H6 103 aa11.83□□□□□ -0.52
PRPF38A-201ENST00000257181 MC5RP33032 325 aa11.83□□□□□ -0.52
PRPF38A-201ENST00000257181 ABHD3Q8WU67 409 aa11.83□□□□□ -0.52
PRPF38A-201ENST00000257181 PFDN5Q99471 154 aa11.83□□□□□ -0.52
PRPF38A-201ENST00000257181 CHRDL1Q9BU40 450 aa11.83□□□□□ -0.52
PRPF38A-201ENST00000257181 GCM1Q9NP62 436 aa11.83□□□□□ -0.52
PRPF38A-201ENST00000257181 GDF9O60383 454 aa11.83□□□□□ -0.52
PRPF38A-201ENST00000257181 CDC14BO60729 498 aa11.83□□□□□ -0.52
PRPF38A-201ENST00000257181 ELK1P19419 428 aa11.83□□□□□ -0.52
PRPF38A-201ENST00000257181 CDAP32320 146 aa11.83□□□□□ -0.52
PRPF38A-201ENST00000257181 GK2Q14410 553 aaPredicted RBP11.83□□□□□ -0.52
PRPF38A-201ENST00000257181 SSX2Q16385 188 aa11.83□□□□□ -0.52
PRPF38A-201ENST00000257181 C4orf17Q53FE4 359 aa11.83□□□□□ -0.52
PRPF38A-201ENST00000257181 IGF2-ASQ6U949 168 aa11.83□□□□□ -0.52
PRPF38A-201ENST00000257181 SFTPA2Q8IWL1 248 aa11.83□□□□□ -0.52
PRPF38A-201ENST00000257181 KLK13Q9UKR3 277 aa11.83□□□□□ -0.52
PRPF38A-201ENST00000257181 VDAC1P21796 283 aa11.83□□□□□ -0.52
PRPF38A-201ENST00000257181 SLA2Q9H6Q3 261 aa11.83□□□□□ -0.52
PRPF38A-201ENST00000257181 K7EPK0 472 aa11.82□□□□□ -0.52
PRPF38A-201ENST00000257181 GPX5O75715 221 aa11.82□□□□□ -0.52
PRPF38A-201ENST00000257181 PLA2G5P39877 138 aa11.82□□□□□ -0.52
PRPF38A-201ENST00000257181 HOXA4Q00056 320 aaPredicted RBP11.82□□□□□ -0.52
PRPF38A-201ENST00000257181 GGTLC2Q14390 218 aa11.82□□□□□ -0.52
PRPF38A-201ENST00000257181 CEBPEQ15744 281 aa11.82□□□□□ -0.52
PRPF38A-201ENST00000257181 MOGAT3Q86VF5 341 aa11.82□□□□□ -0.52
PRPF38A-201ENST00000257181 FAM71E2Q8N5Q1 922 aa11.82□□□□□ -0.52
PRPF38A-201ENST00000257181 TCTEX1D1Q8N7M0 179 aa11.82□□□□□ -0.52
PRPF38A-201ENST00000257181 OR2T6Q8NHC8 308 aa11.82□□□□□ -0.52
PRPF38A-201ENST00000257181 IMMP1LQ96LU5 166 aa11.82□□□□□ -0.52
PRPF38A-201ENST00000257181 METTL17Q9H7H0 456 aaPredicted RBP11.82□□□□□ -0.52
PRPF38A-201ENST00000257181 A0A0J9YW62 118 aa11.82□□□□□ -0.52
PRPF38A-201ENST00000257181 OR5H1A6NKK0 313 aa11.82□□□□□ -0.52
PRPF38A-201ENST00000257181 PSMB1P20618 241 aaKnown RBP11.82□□□□□ -0.52
PRPF38A-201ENST00000257181 TIMP3P35625 211 aa11.82□□□□□ -0.52
PRPF38A-201ENST00000257181 RPS27AP62979 156 aaKnown RBP11.82□□□□□ -0.52
PRPF38A-201ENST00000257181 UBA52P62987 128 aaKnown RBP11.82□□□□□ -0.52
PRPF38A-201ENST00000257181 TGIF1Q15583 401 aa11.82□□□□□ -0.52
PRPF38A-201ENST00000257181 TIGITQ495A1 244 aa11.82□□□□□ -0.52
PRPF38A-201ENST00000257181 C1QL3Q5VWW1 255 aa11.82□□□□□ -0.52
PRPF38A-201ENST00000257181 PINX1Q96BK5 328 aaKnown RBP11.82□□□□□ -0.52
PRPF38A-201ENST00000257181 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.82□□□□□ -0.52
PRPF38A-201ENST00000257181 FLVCR1Q9Y5Y0 555 aa11.82□□□□□ -0.52
PRPF38A-201ENST00000257181 A0A0U1RQV5 110 aa11.82□□□□□ -0.52
PRPF38A-201ENST00000257181 TAAR5O14804 337 aa11.82□□□□□ -0.52
PRPF38A-201ENST00000257181 TXNDC12O95881 172 aa11.82□□□□□ -0.52
PRPF38A-201ENST00000257181 CT45A10P0DMU9 189 aa11.82□□□□□ -0.52
PRPF38A-201ENST00000257181 ALKBH6Q3KRA9 238 aa11.82□□□□□ -0.52
PRPF38A-201ENST00000257181 PLA2G2CQ5R387 149 aa11.82□□□□□ -0.52
PRPF38A-201ENST00000257181 CCDC28AQ8IWP9 274 aa11.82□□□□□ -0.52
PRPF38A-201ENST00000257181 OR51S1Q8NGJ8 323 aa11.82□□□□□ -0.52
PRPF38A-201ENST00000257181 PKIBQ9C010 78 aa11.82□□□□□ -0.52
PRPF38A-201ENST00000257181 STRAPQ9Y3F4 350 aaKnown RBP11.82□□□□□ -0.52
PRPF38A-201ENST00000257181 SHISA8B8ZZ34 492 aa11.82□□□□□ -0.52
PRPF38A-201ENST00000257181 C9orf172C9J069 976 aa11.82□□□□□ -0.52
PRPF38A-201ENST00000257181 LANCL1O43813 399 aa11.82□□□□□ -0.52
PRPF38A-201ENST00000257181 TSPAN15O95858 294 aa11.82□□□□□ -0.52
PRPF38A-201ENST00000257181 MOB3AQ96BX8 217 aa11.82□□□□□ -0.52
PRPF38A-201ENST00000257181 SEMA5BQ9P283 1151 aa11.82□□□□□ -0.52
PRPF38A-201ENST00000257181 DOCK5Q9H7D0 1870 aa11.82□□□□□ -0.52
PRPF38A-201ENST00000257181 SMIM30A4D0T7 59 aa11.81□□□□□ -0.52
PRPF38A-201ENST00000257181 OR6C68A6NDL8 312 aa11.81□□□□□ -0.52
PRPF38A-201ENST00000257181 FAHP16930 419 aa11.81□□□□□ -0.52
PRPF38A-201ENST00000257181 FOXO1Q12778 655 aa11.81□□□□□ -0.52
PRPF38A-201ENST00000257181 MADCAM1Q13477 382 aa11.81□□□□□ -0.52
PRPF38A-201ENST00000257181 KCNMB1Q16558 191 aa11.81□□□□□ -0.52
PRPF38A-201ENST00000257181 ZNF468Q5VIY5 522 aaPredicted RBP11.81□□□□□ -0.52
PRPF38A-201ENST00000257181 C17orf107Q6ZR85 190 aa11.81□□□□□ -0.52
PRPF38A-201ENST00000257181 BEX2Q9BXY8 128 aa11.81□□□□□ -0.52
PRPF38A-201ENST00000257181 SLC25A10Q9UBX3 287 aaPredicted RBP11.81□□□□□ -0.52
PRPF38A-201ENST00000257181 OR2W5A6NFC9 320 aa11.81□□□□□ -0.52
PRPF38A-201ENST00000257181 K7ENP7 123 aa11.81□□□□□ -0.52
PRPF38A-201ENST00000257181 ARPC1BO15143 372 aaKnown RBP11.81□□□□□ -0.52
PRPF38A-201ENST00000257181 HAND1O96004 215 aa11.81□□□□□ -0.52
PRPF38A-201ENST00000257181 CD226Q15762 336 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms