RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 SPINT1O43278 529 aa16.89■□□□□ 0.29
PTPRE-201ENST00000254667 NDUFB6O95139 128 aa16.89■□□□□ 0.29
PTPRE-201ENST00000254667 BATFQ16520 125 aa16.89■□□□□ 0.29
PTPRE-201ENST00000254667 C16orf47Q6ZP98 133 aaPredicted RBP16.89■□□□□ 0.29
PTPRE-201ENST00000254667 ADAMTSL1Q8N6G6 1762 aa16.89■□□□□ 0.29
PTPRE-201ENST00000254667 TMIGD3P0DMS9 266 aaPredicted RBP16.89■□□□□ 0.29
PTPRE-201ENST00000254667 LCN15Q6UWW0 184 aa16.89■□□□□ 0.29
PTPRE-201ENST00000254667 ZNF251Q9BRH9 671 aa16.89■□□□□ 0.29
PTPRE-201ENST00000254667 AMDHD2Q9Y303 409 aa16.89■□□□□ 0.29
PTPRE-201ENST00000254667 CA6P23280 308 aa16.88■□□□□ 0.29
PTPRE-201ENST00000254667 SLC37A1P57057 533 aa16.88■□□□□ 0.29
PTPRE-201ENST00000254667 ISXQ2M1V0 245 aa16.88■□□□□ 0.29
PTPRE-201ENST00000254667 TCTE3Q8IZS6 198 aa16.88■□□□□ 0.29
PTPRE-201ENST00000254667 MTFP1Q9UDX5 166 aa16.88■□□□□ 0.29
PTPRE-201ENST00000254667 LIPT2A6NK58 231 aa16.88■□□□□ 0.29
PTPRE-201ENST00000254667 DVL1O14640 695 aa16.88■□□□□ 0.29
PTPRE-201ENST00000254667 BMP5P22003 454 aa16.88■□□□□ 0.29
PTPRE-201ENST00000254667 DVL1P1P54792 670 aaPredicted RBP16.88■□□□□ 0.29
PTPRE-201ENST00000254667 PARP12Q9H0J9 701 aaKnown RBP16.88■□□□□ 0.29
PTPRE-201ENST00000254667 OCEL1Q9H607 264 aa16.88■□□□□ 0.29
PTPRE-201ENST00000254667 ZNF831Q5JPB2 1677 aa16.88■□□□□ 0.29
PTPRE-201ENST00000254667 IGHV5-10-1A0A0J9YXX1 117 aa16.88■□□□□ 0.29
PTPRE-201ENST00000254667 TCRBV16S1A1N1A0A5B0 115 aa16.88■□□□□ 0.29
PTPRE-201ENST00000254667 RPUSD3Q6P087 351 aaKnown RBP16.88■□□□□ 0.29
PTPRE-201ENST00000254667 TRBV5-3A0A0A0MS03 114 aa16.88■□□□□ 0.29
PTPRE-201ENST00000254667 BCL2L11O43521 198 aa16.88■□□□□ 0.29
PTPRE-201ENST00000254667 RAG2P55895 527 aa16.88■□□□□ 0.29
PTPRE-201ENST00000254667 COL13A1Q5TAT6 717 aaPredicted RBP16.88■□□□□ 0.29
PTPRE-201ENST00000254667 ZNF787Q6DD87 383 aa16.88■□□□□ 0.29
PTPRE-201ENST00000254667 OR5D13Q8NGL4 314 aa16.88■□□□□ 0.29
PTPRE-201ENST00000254667 TMED3Q9Y3Q3 217 aa16.88■□□□□ 0.29
PTPRE-201ENST00000254667 RAB7AP51149 207 aa16.87■□□□□ 0.29
PTPRE-201ENST00000254667 KLF3P57682 345 aaPredicted RBP16.87■□□□□ 0.29
PTPRE-201ENST00000254667 VASH2Q86V25 355 aa16.87■□□□□ 0.29
PTPRE-201ENST00000254667 ARHGAP5-AS1Q96IT6 56 aa16.87■□□□□ 0.29
PTPRE-201ENST00000254667 NMES1Q9C002 83 aa16.87■□□□□ 0.29
PTPRE-201ENST00000254667 PYCARD-AS1I3L0S3 204 aa16.87■□□□□ 0.29
PTPRE-201ENST00000254667 PDCD6O75340 191 aa16.87■□□□□ 0.29
PTPRE-201ENST00000254667 HRASP01112 189 aa16.87■□□□□ 0.29
PTPRE-201ENST00000254667 TMEM11P17152 192 aa16.87■□□□□ 0.29
PTPRE-201ENST00000254667 PPP1CBP62140 327 aa16.87■□□□□ 0.29
PTPRE-201ENST00000254667 OR8D4Q8NGM9 314 aa16.87■□□□□ 0.29
PTPRE-201ENST00000254667 CA5BP1Q8WTZ4 195 aa16.87■□□□□ 0.29
PTPRE-201ENST00000254667 TINAGL1Q9GZM7 467 aaPredicted RBP16.87■□□□□ 0.29
PTPRE-201ENST00000254667 ICAM5Q9UMF0 924 aa16.87■□□□□ 0.29
PTPRE-201ENST00000254667 RCL1Q9Y2P8 373 aaKnown RBP16.87■□□□□ 0.29
PTPRE-201ENST00000254667 PPP5D1E7EU14 171 aa16.87■□□□□ 0.29
PTPRE-201ENST00000254667 CD226Q15762 336 aa16.87■□□□□ 0.29
PTPRE-201ENST00000254667 SKA3Q8IX90 412 aa16.87■□□□□ 0.29
PTPRE-201ENST00000254667 OR4F5Q8NH21 305 aa16.87■□□□□ 0.29
PTPRE-201ENST00000254667 C10orf35Q96D05 121 aa16.87■□□□□ 0.29
PTPRE-201ENST00000254667 OR4F4Q96R69 305 aa16.87■□□□□ 0.29
PTPRE-201ENST00000254667 MAGT1Q9H0U3 335 aa16.87■□□□□ 0.29
PTPRE-201ENST00000254667 GAB2Q9UQC2 676 aa16.87■□□□□ 0.29
PTPRE-201ENST00000254667 RRASP10301 218 aa16.87■□□□□ 0.29
PTPRE-201ENST00000254667 CCL4P13236 92 aa16.87■□□□□ 0.29
PTPRE-201ENST00000254667 SSX1Q16384 188 aa16.87■□□□□ 0.29
PTPRE-201ENST00000254667 HFEQ30201 348 aa16.87■□□□□ 0.29
PTPRE-201ENST00000254667 ZFP62Q8NB50 900 aaPredicted RBP16.87■□□□□ 0.29
PTPRE-201ENST00000254667 APOBEC4Q8WW27 367 aaKnown RBP16.87■□□□□ 0.29
PTPRE-201ENST00000254667 UMAD1C9J7I0 102 aa16.86■□□□□ 0.29
PTPRE-201ENST00000254667 PGA3P0DJD8 388 aa16.86■□□□□ 0.29
PTPRE-201ENST00000254667 CD37P11049 281 aa16.86■□□□□ 0.29
PTPRE-201ENST00000254667 ZNF816Q0VGE8 651 aaPredicted RBP16.86■□□□□ 0.29
PTPRE-201ENST00000254667 ENDOGQ14249 297 aaKnown RBP16.86■□□□□ 0.29
PTPRE-201ENST00000254667 Q7L0L9 218 aa16.86■□□□□ 0.29
PTPRE-201ENST00000254667 M0R1X1 148 aa16.86■□□□□ 0.29
PTPRE-201ENST00000254667 OR7C2O60412 319 aa16.86■□□□□ 0.29
PTPRE-201ENST00000254667 GPANK1O95872 356 aa16.86■□□□□ 0.29
PTPRE-201ENST00000254667 SLC26A1Q9H2B4 701 aa16.86■□□□□ 0.29
PTPRE-201ENST00000254667 M0QZ24 198 aa16.86■□□□□ 0.29
PTPRE-201ENST00000254667 PPP1R2P9O14990 202 aa16.86■□□□□ 0.29
PTPRE-201ENST00000254667 ALX3O95076 343 aa16.86■□□□□ 0.29
PTPRE-201ENST00000254667 SPINK14Q6IE38 97 aa16.86■□□□□ 0.29
PTPRE-201ENST00000254667 C17orf107Q6ZR85 190 aa16.86■□□□□ 0.29
PTPRE-201ENST00000254667 UBAC2Q8NBM4 344 aa16.86■□□□□ 0.29
PTPRE-201ENST00000254667 PIK3IP1Q96FE7 263 aa16.86■□□□□ 0.29
PTPRE-201ENST00000254667 FLRT3Q9NZU0 649 aa16.86■□□□□ 0.29
PTPRE-201ENST00000254667 MCM3APO60318 1980 aa16.86■□□□□ 0.29
PTPRE-201ENST00000254667 ZNF727A8MUV8 499 aa16.86■□□□□ 0.29
PTPRE-201ENST00000254667 TGOLN2O43493 480 aa16.86■□□□□ 0.29
PTPRE-201ENST00000254667 DNPH1O43598 174 aa16.86■□□□□ 0.29
PTPRE-201ENST00000254667 CTAG2O75638 210 aa16.86■□□□□ 0.29
PTPRE-201ENST00000254667 CD80P33681 288 aa16.86■□□□□ 0.29
PTPRE-201ENST00000254667 TMEM230Q96A57 120 aa16.86■□□□□ 0.29
PTPRE-201ENST00000254667 TMEM56Q96MV1 263 aa16.86■□□□□ 0.29
PTPRE-201ENST00000254667 CXXC4Q9H2H0 198 aa16.86■□□□□ 0.29
PTPRE-201ENST00000254667 F2RP25116 425 aa16.85■□□□□ 0.29
PTPRE-201ENST00000254667 HAGHQ16775 308 aa16.85■□□□□ 0.29
PTPRE-201ENST00000254667 DMRTC1Q5HYR2 192 aa16.85■□□□□ 0.29
PTPRE-201ENST00000254667 BTNL8Q6UX41 500 aa16.85■□□□□ 0.29
PTPRE-201ENST00000254667 PTPMT1Q8WUK0 201 aaPredicted RBP16.85■□□□□ 0.29
PTPRE-201ENST00000254667 TM4SF19Q96DZ7 209 aa16.85■□□□□ 0.29
PTPRE-201ENST00000254667 NKX6-2Q9C056 277 aaPredicted RBP16.85■□□□□ 0.29
PTPRE-201ENST00000254667 GAL3ST2Q9H3Q3 398 aa16.85■□□□□ 0.29
PTPRE-201ENST00000254667 OR5V1Q9UGF6 321 aa16.85■□□□□ 0.29
PTPRE-201ENST00000254667 CDC14BO60729 498 aa16.85■□□□□ 0.29
PTPRE-201ENST00000254667 OR5AP2Q8NGF4 316 aa16.85■□□□□ 0.29
PTPRE-201ENST00000254667 OR8U1Q8NH10 309 aa16.85■□□□□ 0.29
PTPRE-201ENST00000254667 WDR89Q96FK6 387 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms