RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 EIF4E2O60573 245 aaKnown RBP11.84□□□□□ -0.51
PCDHGA3-201ENST00000253812 B3GALT4O96024 378 aa11.84□□□□□ -0.51
PCDHGA3-201ENST00000253812 MBPP02686 304 aaPredicted RBP11.84□□□□□ -0.51
PCDHGA3-201ENST00000253812 C1SP09871 688 aa11.84□□□□□ -0.51
PCDHGA3-201ENST00000253812 DEFA4P12838 97 aa11.84□□□□□ -0.51
PCDHGA3-201ENST00000253812 CD1CP29017 333 aa11.84□□□□□ -0.51
PCDHGA3-201ENST00000253812 AESQ08117 197 aa11.84□□□□□ -0.51
PCDHGA3-201ENST00000253812 CYB5R2Q6BCY4 276 aa11.84□□□□□ -0.51
PCDHGA3-201ENST00000253812 SLC17A4Q9Y2C5 497 aa11.84□□□□□ -0.51
PCDHGA3-201ENST00000253812 FAM221AA4D161 298 aa11.84□□□□□ -0.51
PCDHGA3-201ENST00000253812 GALR2O43603 387 aaPredicted RBP11.84□□□□□ -0.51
PCDHGA3-201ENST00000253812 FABP2P12104 132 aa11.84□□□□□ -0.51
PCDHGA3-201ENST00000253812 PGFP49763 221 aa11.84□□□□□ -0.51
PCDHGA3-201ENST00000253812 CLN3Q13286 438 aa11.84□□□□□ -0.51
PCDHGA3-201ENST00000253812 TRMT12Q53H54 448 aaKnown RBP11.84□□□□□ -0.51
PCDHGA3-201ENST00000253812 FAM78AQ5JUQ0 283 aa11.84□□□□□ -0.51
PCDHGA3-201ENST00000253812 ZNF362Q5T0B9 420 aaPredicted RBP11.84□□□□□ -0.51
PCDHGA3-201ENST00000253812 ZNF880Q6PDB4 577 aa11.84□□□□□ -0.51
PCDHGA3-201ENST00000253812 ZBP1Q9H171 429 aa11.84□□□□□ -0.51
PCDHGA3-201ENST00000253812 MANBALQ9NQG1 85 aa11.84□□□□□ -0.51
PCDHGA3-201ENST00000253812 PRKRAO75569 313 aaKnown RBP11.83□□□□□ -0.51
PCDHGA3-201ENST00000253812 ABLIM3O94929 683 aa11.83□□□□□ -0.51
PCDHGA3-201ENST00000253812 F2RP25116 425 aa11.83□□□□□ -0.51
PCDHGA3-201ENST00000253812 EIF1P41567 113 aaKnown RBP11.83□□□□□ -0.51
PCDHGA3-201ENST00000253812 GPR12P47775 334 aa11.83□□□□□ -0.51
PCDHGA3-201ENST00000253812 ASCL1P50553 236 aa11.83□□□□□ -0.51
PCDHGA3-201ENST00000253812 NAAAQ02083 359 aa11.83□□□□□ -0.51
PCDHGA3-201ENST00000253812 ACVR1Q04771 509 aa11.83□□□□□ -0.51
PCDHGA3-201ENST00000253812 DMWDQ09019 674 aa11.83□□□□□ -0.51
PCDHGA3-201ENST00000253812 IL24Q13007 206 aa11.83□□□□□ -0.51
PCDHGA3-201ENST00000253812 ZNF124Q15973 351 aa11.83□□□□□ -0.51
PCDHGA3-201ENST00000253812 LHFPL2Q6ZUX7 228 aa11.83□□□□□ -0.51
PCDHGA3-201ENST00000253812 ADAT1Q9BUB4 502 aaKnown RBP11.83□□□□□ -0.51
PCDHGA3-201ENST00000253812 STRADBQ9C0K7 418 aa11.83□□□□□ -0.51
PCDHGA3-201ENST00000253812 P2RY12Q9H244 342 aa11.83□□□□□ -0.51
PCDHGA3-201ENST00000253812 A4GNTQ9UNA3 340 aa11.83□□□□□ -0.51
PCDHGA3-201ENST00000253812 C19orf53Q9UNZ5 99 aaPredicted RBP11.83□□□□□ -0.51
PCDHGA3-201ENST00000253812 ABCA3Q99758 1704 aa11.83□□□□□ -0.52
PCDHGA3-201ENST00000253812 KIAA1551Q9HCM1 1747 aa11.83□□□□□ -0.52
PCDHGA3-201ENST00000253812 LOC105371267A0A1B0GV96 52 aa11.83□□□□□ -0.52
PCDHGA3-201ENST00000253812 MED19A0JLT2 244 aaPredicted RBP11.83□□□□□ -0.52
PCDHGA3-201ENST00000253812 ZNF729A6NN14 1252 aaPredicted RBP11.83□□□□□ -0.52
PCDHGA3-201ENST00000253812 HS3ST1O14792 307 aa11.83□□□□□ -0.52
PCDHGA3-201ENST00000253812 ONECUT2O95948 504 aa11.83□□□□□ -0.52
PCDHGA3-201ENST00000253812 MYOGP15173 224 aa11.83□□□□□ -0.52
PCDHGA3-201ENST00000253812 IL3RAP26951 378 aa11.83□□□□□ -0.52
PCDHGA3-201ENST00000253812 EDDM3BP56851 147 aa11.83□□□□□ -0.52
PCDHGA3-201ENST00000253812 ERVFRD-1P60508 538 aa11.83□□□□□ -0.52
PCDHGA3-201ENST00000253812 ERHP84090 104 aaKnown RBP11.83□□□□□ -0.52
PCDHGA3-201ENST00000253812 OR11L1Q8NGX0 322 aa11.83□□□□□ -0.52
PCDHGA3-201ENST00000253812 SPPL3Q8TCT6 385 aa11.83□□□□□ -0.52
PCDHGA3-201ENST00000253812 ZNF346Q9UL40 294 aaKnown RBP11.83□□□□□ -0.52
PCDHGA3-201ENST00000253812 COL4A1P02462 1669 aa11.83□□□□□ -0.52
PCDHGA3-201ENST00000253812 NEURL1O76050 574 aa11.83□□□□□ -0.52
PCDHGA3-201ENST00000253812 SBK3P0C264 359 aa11.83□□□□□ -0.52
PCDHGA3-201ENST00000253812 PVRP15151 417 aa11.83□□□□□ -0.52
PCDHGA3-201ENST00000253812 PXNP49023 591 aaPredicted RBP11.83□□□□□ -0.52
PCDHGA3-201ENST00000253812 ZNF750Q32MQ0 723 aa11.83□□□□□ -0.52
PCDHGA3-201ENST00000253812 OIT3Q8WWZ8 545 aa11.83□□□□□ -0.52
PCDHGA3-201ENST00000253812 OR4C12Q96R67 309 aa11.83□□□□□ -0.52
PCDHGA3-201ENST00000253812 GPX7Q96SL4 187 aaPredicted RBP11.83□□□□□ -0.52
PCDHGA3-201ENST00000253812 EPHX3Q9H6B9 360 aa11.83□□□□□ -0.52
PCDHGA3-201ENST00000253812 HSPB8Q9UJY1 196 aa11.83□□□□□ -0.52
PCDHGA3-201ENST00000253812 LSM2Q9Y333 95 aaKnown RBP11.83□□□□□ -0.52
PCDHGA3-201ENST00000253812 ECM29Q5VYK3 1845 aa11.83□□□□□ -0.52
PCDHGA3-201ENST00000253812 COX7A2P2O60397 106 aa11.83□□□□□ -0.52
PCDHGA3-201ENST00000253812 CTAG2O75638 210 aa11.83□□□□□ -0.52
PCDHGA3-201ENST00000253812 EDN3P14138 238 aa11.83□□□□□ -0.52
PCDHGA3-201ENST00000253812 HINT1P49773 126 aaPredicted RBP11.83□□□□□ -0.52
PCDHGA3-201ENST00000253812 SLC38A11Q08AI6 406 aa11.83□□□□□ -0.52
PCDHGA3-201ENST00000253812 GABRA6Q16445 453 aa11.83□□□□□ -0.52
PCDHGA3-201ENST00000253812 LHX8Q68G74 356 aa11.83□□□□□ -0.52
PCDHGA3-201ENST00000253812 C17orf78Q8N4C9 275 aa11.83□□□□□ -0.52
PCDHGA3-201ENST00000253812 INSM2Q96T92 566 aaPredicted RBP11.83□□□□□ -0.52
PCDHGA3-201ENST00000253812 CDK5RAP2Q96SN8 1893 aa11.82□□□□□ -0.52
PCDHGA3-201ENST00000253812 ARAP2Q8WZ64 1704 aa11.82□□□□□ -0.52
PCDHGA3-201ENST00000253812 OR2M5A3KFT3 312 aa11.82□□□□□ -0.52
PCDHGA3-201ENST00000253812 SEC11BP0C7V7 166 aa11.82□□□□□ -0.52
PCDHGA3-201ENST00000253812 CDC34P49427 236 aaPredicted RBP11.82□□□□□ -0.52
PCDHGA3-201ENST00000253812 CAMPP49913 170 aa11.82□□□□□ -0.52
PCDHGA3-201ENST00000253812 PCBP3P57721 371 aaKnown RBP11.82□□□□□ -0.52
PCDHGA3-201ENST00000253812 TCTAP57738 103 aa11.82□□□□□ -0.52
PCDHGA3-201ENST00000253812 OR5A2Q8NGI9 324 aa11.82□□□□□ -0.52
PCDHGA3-201ENST00000253812 BCL2L2Q92843 193 aaPredicted RBP11.82□□□□□ -0.52
PCDHGA3-201ENST00000253812 MIXL1Q9H2W2 232 aa11.82□□□□□ -0.52
PCDHGA3-201ENST00000253812 SLC45A2Q9UMX9 530 aa11.82□□□□□ -0.52
PCDHGA3-201ENST00000253812 DOCK2Q92608 1830 aa11.82□□□□□ -0.52
PCDHGA3-201ENST00000253812 MPTX1A8MV57 137 aa11.82□□□□□ -0.52
PCDHGA3-201ENST00000253812 GUSBP08236 651 aa11.82□□□□□ -0.52
PCDHGA3-201ENST00000253812 HMGA1P17096 107 aaKnown RBP11.82□□□□□ -0.52
PCDHGA3-201ENST00000253812 RPS27P42677 84 aaKnown RBP11.82□□□□□ -0.52
PCDHGA3-201ENST00000253812 ACAA2P42765 397 aaKnown RBP11.82□□□□□ -0.52
PCDHGA3-201ENST00000253812 ANKRD33Q7Z3H0 272 aa11.82□□□□□ -0.52
PCDHGA3-201ENST00000253812 OR2D2Q9H210 308 aa11.82□□□□□ -0.52
PCDHGA3-201ENST00000253812 GSN-AS1Q9NRJ2 163 aa11.82□□□□□ -0.52
PCDHGA3-201ENST00000253812 METTL1Q9UBP6 276 aaKnown RBP11.82□□□□□ -0.52
PCDHGA3-201ENST00000253812 CD207Q9UJ71 328 aa11.82□□□□□ -0.52
PCDHGA3-201ENST00000253812 POLDIP2Q9Y2S7 368 aa11.82□□□□□ -0.52
PCDHGA3-201ENST00000253812 BCORQ6W2J9 1755 aa11.82□□□□□ -0.52
PCDHGA3-201ENST00000253812 SPAG17Q6Q759 2223 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms