RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 ACTA1P68133 377 aa19.01■□□□□ 0.63
LSM4-201ENST00000252816 ZNF91Q05481 1191 aa19.01■□□□□ 0.63
LSM4-201ENST00000252816 ZSCAN26Q16670 478 aa19.01■□□□□ 0.63
LSM4-201ENST00000252816 CDONQ4KMG0 1287 aa19.01■□□□□ 0.63
LSM4-201ENST00000252816 ATPAF1Q5TC12 328 aaPredicted RBP19.01■□□□□ 0.63
LSM4-201ENST00000252816 HAGHLQ6PII5 290 aaPredicted RBP19.01■□□□□ 0.63
LSM4-201ENST00000252816 BTN2A1Q7KYR7 527 aa19.01■□□□□ 0.63
LSM4-201ENST00000252816 FAM220AQ7Z4H9 259 aa19.01■□□□□ 0.63
LSM4-201ENST00000252816 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP19.01■□□□□ 0.63
LSM4-201ENST00000252816 ST8SIA4Q92187 359 aa19.01■□□□□ 0.63
LSM4-201ENST00000252816 DNAJB11Q9UBS4 358 aa19.01■□□□□ 0.63
LSM4-201ENST00000252816 SOX21Q9Y651 276 aaPredicted RBP19.01■□□□□ 0.63
LSM4-201ENST00000252816 A0A1B0GVI7 797 aa19■□□□□ 0.63
LSM4-201ENST00000252816 DAPL1A0PJW8 107 aa19■□□□□ 0.63
LSM4-201ENST00000252816 SLC16A6O15403 523 aa19■□□□□ 0.63
LSM4-201ENST00000252816 SYT7O43581 403 aa19■□□□□ 0.63
LSM4-201ENST00000252816 DBTP11182 482 aaKnown RBP19■□□□□ 0.63
LSM4-201ENST00000252816 OR12D2P58182 307 aa19■□□□□ 0.63
LSM4-201ENST00000252816 SLC36A1Q7Z2H8 476 aa19■□□□□ 0.63
LSM4-201ENST00000252816 RDH10Q8IZV5 341 aa19■□□□□ 0.63
LSM4-201ENST00000252816 ACBD7Q8N6N7 88 aa19■□□□□ 0.63
LSM4-201ENST00000252816 SIGLECL1Q8N7X8 197 aa19■□□□□ 0.63
LSM4-201ENST00000252816 ANGPTL6Q8NI99 470 aa19■□□□□ 0.63
LSM4-201ENST00000252816 AMBNQ9NP70 447 aa19■□□□□ 0.63
LSM4-201ENST00000252816 TRAV40A0A0B4J280 105 aa18.99■□□□□ 0.63
LSM4-201ENST00000252816 PQLC2LA1A4F0 135 aa18.99■□□□□ 0.63
LSM4-201ENST00000252816 SNTNA6NMZ2 147 aa18.99■□□□□ 0.63
LSM4-201ENST00000252816 PLATP00750 562 aa18.99■□□□□ 0.63
LSM4-201ENST00000252816 SFTPBP07988 381 aa18.99■□□□□ 0.63
LSM4-201ENST00000252816 GLRA1P23415 457 aa18.99■□□□□ 0.63
LSM4-201ENST00000252816 IKZF1Q13422 519 aa18.99■□□□□ 0.63
LSM4-201ENST00000252816 ZDHHC22Q8N966 263 aa18.99■□□□□ 0.63
LSM4-201ENST00000252816 OR2G2Q8NGZ5 317 aa18.99■□□□□ 0.63
LSM4-201ENST00000252816 ZNF671Q8TAW3 534 aa18.99■□□□□ 0.63
LSM4-201ENST00000252816 ZFAND2BQ8WV99 257 aa18.99■□□□□ 0.63
LSM4-201ENST00000252816 APH1BQ8WW43 257 aa18.99■□□□□ 0.63
LSM4-201ENST00000252816 ZNF48Q96MX3 618 aaPredicted RBP18.99■□□□□ 0.63
LSM4-201ENST00000252816 NLKQ9UBE8 527 aa18.99■□□□□ 0.63
LSM4-201ENST00000252816 RPUSD1Q9UJJ7 312 aaKnown RBP18.99■□□□□ 0.63
LSM4-201ENST00000252816 ZNF879B4DU55 563 aa18.98■□□□□ 0.63
LSM4-201ENST00000252816 SYNGR1O43759 233 aa18.98■□□□□ 0.63
LSM4-201ENST00000252816 MPZL2O60487 215 aa18.98■□□□□ 0.63
LSM4-201ENST00000252816 ECDO95905 644 aaPredicted RBP18.98■□□□□ 0.63
LSM4-201ENST00000252816 LIPFP07098 398 aa18.98■□□□□ 0.63
LSM4-201ENST00000252816 MMP9P14780 707 aa18.98■□□□□ 0.63
LSM4-201ENST00000252816 HAAOP46952 286 aa18.98■□□□□ 0.63
LSM4-201ENST00000252816 NANOS3P60323 173 aaKnown RBP18.98■□□□□ 0.63
LSM4-201ENST00000252816 C11orf91Q3C1V1 193 aa18.98■□□□□ 0.63
LSM4-201ENST00000252816 ZNF788Q6ZQV5 615 aa18.98■□□□□ 0.63
LSM4-201ENST00000252816 KCTD20Q7Z5Y7 419 aa18.98■□□□□ 0.63
LSM4-201ENST00000252816 PNLDC1Q8NA58 520 aaKnown RBP18.98■□□□□ 0.63
LSM4-201ENST00000252816 ZNF488Q96MN9 340 aa18.98■□□□□ 0.63
LSM4-201ENST00000252816 Q96MT0 163 aa18.98■□□□□ 0.63
LSM4-201ENST00000252816 GAFA1Q96PS6 74 aa18.98■□□□□ 0.63
LSM4-201ENST00000252816 JMJD8Q96S16 334 aa18.98■□□□□ 0.63
LSM4-201ENST00000252816 PCGF1Q9BSM1 259 aa18.98■□□□□ 0.63
LSM4-201ENST00000252816 DNTTIP1Q9H147 329 aa18.98■□□□□ 0.63
LSM4-201ENST00000252816 SMPD3Q9NY59 655 aaPredicted RBP18.98■□□□□ 0.63
LSM4-201ENST00000252816 MYRFQ9Y2G1 1151 aa18.98■□□□□ 0.63
LSM4-201ENST00000252816 PCDHGB1Q9Y5G3 927 aa18.98■□□□□ 0.63
LSM4-201ENST00000252816 LOC107986453A0A1B0GWG9 222 aa18.97■□□□□ 0.63
LSM4-201ENST00000252816 ANKRD61A6NGH8 418 aa18.97■□□□□ 0.63
LSM4-201ENST00000252816 OR2AT4A6NND4 320 aa18.97■□□□□ 0.63
LSM4-201ENST00000252816 NDUFB3O43676 98 aa18.97■□□□□ 0.63
LSM4-201ENST00000252816 DGUOKQ16854 277 aa18.97■□□□□ 0.63
LSM4-201ENST00000252816 LRRC36Q1X8D7 754 aa18.97■□□□□ 0.63
LSM4-201ENST00000252816 FDX2Q6P4F2 183 aa18.97■□□□□ 0.63
LSM4-201ENST00000252816 TMIGD2Q96BF3 282 aa18.97■□□□□ 0.63
LSM4-201ENST00000252816 RDH12Q96NR8 316 aa18.97■□□□□ 0.63
LSM4-201ENST00000252816 TBX15Q96SF7 602 aa18.97■□□□□ 0.63
LSM4-201ENST00000252816 ADI1Q9BV57 179 aa18.97■□□□□ 0.63
LSM4-201ENST00000252816 MS4A7Q9GZW8 240 aaPredicted RBP18.97■□□□□ 0.63
LSM4-201ENST00000252816 SIRPDQ9H106 197 aa18.97■□□□□ 0.63
LSM4-201ENST00000252816 PLEKHA1Q9HB21 404 aa18.97■□□□□ 0.63
LSM4-201ENST00000252816 FRRS1LQ9P0K9 344 aa18.97■□□□□ 0.63
LSM4-201ENST00000252816 ZNF222Q9UK12 451 aa18.97■□□□□ 0.63
LSM4-201ENST00000252816 IGKV1D-17A0A075B6S4 117 aa18.96■□□□□ 0.63
LSM4-201ENST00000252816 NKX6-3A6NJ46 265 aa18.96■□□□□ 0.63
LSM4-201ENST00000252816 ANKRD65E5RJM6 399 aa18.96■□□□□ 0.63
LSM4-201ENST00000252816 J3QLW9 94 aa18.96■□□□□ 0.63
LSM4-201ENST00000252816 J3QT63 122 aa18.96■□□□□ 0.63
LSM4-201ENST00000252816 UBCP0CG48 685 aaKnown RBP18.96■□□□□ 0.63
LSM4-201ENST00000252816 PSG2P11465 335 aa18.96■□□□□ 0.63
LSM4-201ENST00000252816 ZNF19P17023 458 aa18.96■□□□□ 0.63
LSM4-201ENST00000252816 ARF6P62330 175 aa18.96■□□□□ 0.63
LSM4-201ENST00000252816 RCN1Q15293 331 aa18.96■□□□□ 0.63
LSM4-201ENST00000252816 UBE2V2Q15819 145 aa18.96■□□□□ 0.63
LSM4-201ENST00000252816 LRRC10Q5BKY1 277 aa18.96■□□□□ 0.63
LSM4-201ENST00000252816 LPCAT4Q643R3 524 aa18.96■□□□□ 0.63
LSM4-201ENST00000252816 C9orf139Q6ZV77 190 aa18.96■□□□□ 0.63
LSM4-201ENST00000252816 LHFPL3Q86UP9 236 aa18.96■□□□□ 0.63
LSM4-201ENST00000252816 ZNF573Q86YE8 665 aa18.96■□□□□ 0.63
LSM4-201ENST00000252816 POC1AQ8NBT0 407 aa18.96■□□□□ 0.63
LSM4-201ENST00000252816 LY6G5BQ8NDX9 201 aa18.96■□□□□ 0.63
LSM4-201ENST00000252816 TRMT10AQ8TBZ6 339 aaKnown RBP18.96■□□□□ 0.63
LSM4-201ENST00000252816 PELI1Q96FA3 418 aa18.96■□□□□ 0.63
LSM4-201ENST00000252816 C4orf36Q96KX1 117 aa18.96■□□□□ 0.63
LSM4-201ENST00000252816 WDFY2Q96P53 400 aa18.96■□□□□ 0.63
LSM4-201ENST00000252816 ZNF649Q9BS31 505 aa18.96■□□□□ 0.63
LSM4-201ENST00000252816 ANK2Q01484 3957 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms