RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 TSC22D3Q99576 134 aa11.04□□□□□ -0.64
LSM8-201ENST00000249299 MRPL37Q9BZE1 423 aaKnown RBP11.04□□□□□ -0.64
LSM8-201ENST00000249299 PKIBQ9C010 78 aa11.04□□□□□ -0.64
LSM8-201ENST00000249299 C6orf62Q9GZU0 229 aaPredicted RBP11.04□□□□□ -0.64
LSM8-201ENST00000249299 ABCG5Q9H222 651 aa11.04□□□□□ -0.64
LSM8-201ENST00000249299 CXXC4Q9H2H0 198 aa11.04□□□□□ -0.64
LSM8-201ENST00000249299 SMURF1Q9HCE7 757 aa11.04□□□□□ -0.64
LSM8-201ENST00000249299 DUSP13Q9UII6 198 aa11.04□□□□□ -0.64
LSM8-201ENST00000249299 FLNCQ14315 2725 aa11.03□□□□□ -0.64
LSM8-201ENST00000249299 A0A0A6YYH2 397 aa11.03□□□□□ -0.64
LSM8-201ENST00000249299 FAM221AA4D161 298 aa11.03□□□□□ -0.64
LSM8-201ENST00000249299 LRP5LA4QPB2 252 aa11.03□□□□□ -0.64
LSM8-201ENST00000249299 A6NJ64 397 aa11.03□□□□□ -0.64
LSM8-201ENST00000249299 E7EQL1 145 aa11.03□□□□□ -0.64
LSM8-201ENST00000249299 TNFSF4P23510 183 aa11.03□□□□□ -0.64
LSM8-201ENST00000249299 MPZP25189 248 aa11.03□□□□□ -0.64
LSM8-201ENST00000249299 PTBP1P26599 531 aaKnown RBP eCLIP11.03□□□□□ -0.64
LSM8-201ENST00000249299 CD200P41217 278 aa11.03□□□□□ -0.64
LSM8-201ENST00000249299 ZP1P60852 638 aa11.03□□□□□ -0.64
LSM8-201ENST00000249299 PDZK1IP1Q13113 114 aa11.03□□□□□ -0.64
LSM8-201ENST00000249299 MSMPQ1L6U9 139 aa11.03□□□□□ -0.64
LSM8-201ENST00000249299 METAP1DQ6UB28 335 aaPredicted RBP11.03□□□□□ -0.64
LSM8-201ENST00000249299 ANGPTL5Q86XS5 388 aa11.03□□□□□ -0.64
LSM8-201ENST00000249299 MKXQ8IYA7 352 aa11.03□□□□□ -0.64
LSM8-201ENST00000249299 Q8NFD4 153 aa11.03□□□□□ -0.64
LSM8-201ENST00000249299 KCNG3Q8TAE7 436 aa11.03□□□□□ -0.64
LSM8-201ENST00000249299 TRMT10AQ8TBZ6 339 aaKnown RBP11.03□□□□□ -0.64
LSM8-201ENST00000249299 ERGIC1Q969X5 290 aa11.03□□□□□ -0.64
LSM8-201ENST00000249299 ADAT1Q9BUB4 502 aaKnown RBP11.03□□□□□ -0.64
LSM8-201ENST00000249299 CST11Q9H112 138 aa11.03□□□□□ -0.64
LSM8-201ENST00000249299 TLNRD1Q9H1K6 362 aa11.03□□□□□ -0.64
LSM8-201ENST00000249299 MS4A5Q9H3V2 200 aa11.03□□□□□ -0.64
LSM8-201ENST00000249299 FAIMQ9NVQ4 179 aa11.03□□□□□ -0.64
LSM8-201ENST00000249299 CISD1Q9NZ45 108 aaKnown RBP11.03□□□□□ -0.64
LSM8-201ENST00000249299 TAAR3PQ9P1P4 343 aa11.03□□□□□ -0.64
LSM8-201ENST00000249299 MRPS28Q9Y2Q9 187 aaKnown RBP11.03□□□□□ -0.64
LSM8-201ENST00000249299 PRR14LQ5THK1 2151 aa11.02□□□□□ -0.64
LSM8-201ENST00000249299 USP9XQ93008 2570 aaPredicted RBP11.02□□□□□ -0.65
LSM8-201ENST00000249299 FAM230AA0A1W2PPH8 454 aa11.02□□□□□ -0.65
LSM8-201ENST00000249299 ZNF732B4DXR9 585 aa11.02□□□□□ -0.65
LSM8-201ENST00000249299 H3BUI4 141 aa11.02□□□□□ -0.65
LSM8-201ENST00000249299 LDLRAD4O15165 306 aa11.02□□□□□ -0.65
LSM8-201ENST00000249299 LILRA1O75019 489 aa11.02□□□□□ -0.65
LSM8-201ENST00000249299 CYB5AP00167 134 aa11.02□□□□□ -0.65
LSM8-201ENST00000249299 CD55P08174 381 aa11.02□□□□□ -0.65
LSM8-201ENST00000249299 SLC2A2P11168 524 aaPredicted RBP11.02□□□□□ -0.65
LSM8-201ENST00000249299 CFHR2P36980 270 aa11.02□□□□□ -0.65
LSM8-201ENST00000249299 GATA4P43694 442 aa11.02□□□□□ -0.65
LSM8-201ENST00000249299 SRSF1Q07955 248 aaKnown RBP eCLIP11.02□□□□□ -0.65
LSM8-201ENST00000249299 IL24Q13007 206 aa11.02□□□□□ -0.65
LSM8-201ENST00000249299 PCGF3Q3KNV8 242 aa11.02□□□□□ -0.65
LSM8-201ENST00000249299 C2orf76Q3KRA6 126 aa11.02□□□□□ -0.65
LSM8-201ENST00000249299 ALKBH6Q3KRA9 238 aa11.02□□□□□ -0.65
LSM8-201ENST00000249299 TMEM255AQ5JRV8 349 aa11.02□□□□□ -0.65
LSM8-201ENST00000249299 UBE2NLQ5JXB2 153 aa11.02□□□□□ -0.65
LSM8-201ENST00000249299 HES5Q5TA89 166 aa11.02□□□□□ -0.65
LSM8-201ENST00000249299 AWAT2Q6E213 333 aa11.02□□□□□ -0.65
LSM8-201ENST00000249299 CRIP3Q6Q6R5 217 aa11.02□□□□□ -0.65
LSM8-201ENST00000249299 VHLLQ6RSH7 139 aa11.02□□□□□ -0.65
LSM8-201ENST00000249299 MEX3BQ6ZN04 569 aaKnown RBP11.02□□□□□ -0.65
LSM8-201ENST00000249299 Q8IYB0 196 aa11.02□□□□□ -0.65
LSM8-201ENST00000249299 OR4D6Q8NGJ1 314 aa11.02□□□□□ -0.65
LSM8-201ENST00000249299 PIK3IP1Q96FE7 263 aa11.02□□□□□ -0.65
LSM8-201ENST00000249299 S100A13Q99584 98 aa11.02□□□□□ -0.65
LSM8-201ENST00000249299 NUDT16L1Q9BRJ7 211 aaKnown RBP11.02□□□□□ -0.65
LSM8-201ENST00000249299 OR51I2Q9H344 312 aa11.02□□□□□ -0.65
LSM8-201ENST00000249299 COMMD3Q9UBI1 195 aa11.02□□□□□ -0.65
LSM8-201ENST00000249299 OR5V1Q9UGF6 321 aa11.02□□□□□ -0.65
LSM8-201ENST00000249299 RAB22AQ9UL26 194 aa11.02□□□□□ -0.65
LSM8-201ENST00000249299 POLDIP2Q9Y2S7 368 aa11.02□□□□□ -0.65
LSM8-201ENST00000249299 CADP27708 2225 aa11.02□□□□□ -0.65
LSM8-201ENST00000249299 HCFC1P51610 2035 aa11.01□□□□□ -0.65
LSM8-201ENST00000249299 IGKV1-27A0A075B6S5 117 aa11.01□□□□□ -0.65
LSM8-201ENST00000249299 SMIM30A4D0T7 59 aa11.01□□□□□ -0.65
LSM8-201ENST00000249299 A6NNC1 897 aa11.01□□□□□ -0.65
LSM8-201ENST00000249299 TMEM14DPA8MWL7 114 aa11.01□□□□□ -0.65
LSM8-201ENST00000249299 C19orf84I3L1E1 186 aa11.01□□□□□ -0.65
LSM8-201ENST00000249299 J3QT63 122 aa11.01□□□□□ -0.65
LSM8-201ENST00000249299 M0R233 179 aa11.01□□□□□ -0.65
LSM8-201ENST00000249299 CTDSP2O14595 271 aa11.01□□□□□ -0.65
LSM8-201ENST00000249299 RGS5O15539 181 aa11.01□□□□□ -0.65
LSM8-201ENST00000249299 MLNRO43193 412 aa11.01□□□□□ -0.65
LSM8-201ENST00000249299 BMP4P12644 408 aa11.01□□□□□ -0.65
LSM8-201ENST00000249299 TALDO1P37837 337 aa11.01□□□□□ -0.65
LSM8-201ENST00000249299 POU3F4P49335 361 aa11.01□□□□□ -0.65
LSM8-201ENST00000249299 SRP9P49458 86 aaKnown RBP11.01□□□□□ -0.65
LSM8-201ENST00000249299 ZNF81P51508 661 aa11.01□□□□□ -0.65
LSM8-201ENST00000249299 GPM6AP51674 278 aa11.01□□□□□ -0.65
LSM8-201ENST00000249299 ART1P52961 327 aa11.01□□□□□ -0.65
LSM8-201ENST00000249299 QRFPP83859 136 aa11.01□□□□□ -0.65
LSM8-201ENST00000249299 ZNF45Q02386 682 aa11.01□□□□□ -0.65
LSM8-201ENST00000249299 SNTB1Q13884 538 aaKnown RBP11.01□□□□□ -0.65
LSM8-201ENST00000249299 NKPD1Q17RQ9 610 aa11.01□□□□□ -0.65
LSM8-201ENST00000249299 SPANXN2Q5MJ10 180 aa11.01□□□□□ -0.65
LSM8-201ENST00000249299 ELP2Q6IA86 826 aa11.01□□□□□ -0.65
LSM8-201ENST00000249299 RAB12Q6IQ22 244 aa11.01□□□□□ -0.65
LSM8-201ENST00000249299 GLIPR1L1Q6UWM5 242 aa11.01□□□□□ -0.65
LSM8-201ENST00000249299 BAIAP2L2Q6UXY1 529 aa11.01□□□□□ -0.65
LSM8-201ENST00000249299 Q6ZR03 302 aa11.01□□□□□ -0.65
LSM8-201ENST00000249299 CCDC190Q86UF4 302 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms