RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 hCG_38984A0A1B0GV85 526 aa13.16□□□□□ -0.3
DDX49-201ENST00000247003 ARGFXA6NJG6 315 aa13.16□□□□□ -0.3
DDX49-201ENST00000247003 RFPL4AA6NLU0 287 aa13.16□□□□□ -0.3
DDX49-201ENST00000247003 FOXI3A8MTJ6 420 aaPredicted RBP13.16□□□□□ -0.3
DDX49-201ENST00000247003 RFPL4AL1F8VTS6 287 aa13.16□□□□□ -0.3
DDX49-201ENST00000247003 RPL36A-HNRNPH2H7BZ11 118 aa13.16□□□□□ -0.3
DDX49-201ENST00000247003 SERPINA5P05154 406 aa13.16□□□□□ -0.3
DDX49-201ENST00000247003 MMP7P09237 267 aaPredicted RBP13.16□□□□□ -0.3
DDX49-201ENST00000247003 PPP3CBP16298 524 aa13.16□□□□□ -0.3
DDX49-201ENST00000247003 ATP1B3P54709 279 aa13.16□□□□□ -0.3
DDX49-201ENST00000247003 SNU13P55769 128 aaKnown RBP13.16□□□□□ -0.3
DDX49-201ENST00000247003 ARG2P78540 354 aa13.16□□□□□ -0.3
DDX49-201ENST00000247003 ARF1P84077 181 aaKnown RBP13.16□□□□□ -0.3
DDX49-201ENST00000247003 RSPO4Q2I0M5 234 aaPredicted RBP13.16□□□□□ -0.3
DDX49-201ENST00000247003 CHRFAM7AQ494W8 412 aa13.16□□□□□ -0.3
DDX49-201ENST00000247003 NKAPLQ5M9Q1 402 aa13.16□□□□□ -0.3
DDX49-201ENST00000247003 C3P1Q6ZMU1 363 aa13.16□□□□□ -0.3
DDX49-201ENST00000247003 FNDC9Q8TBE3 224 aa13.16□□□□□ -0.3
DDX49-201ENST00000247003 MARCH1Q8TCQ1 289 aa13.16□□□□□ -0.3
DDX49-201ENST00000247003 MITD1Q8WV92 249 aa13.16□□□□□ -0.3
DDX49-201ENST00000247003 MRGPRFQ96AM1 343 aa13.16□□□□□ -0.3
DDX49-201ENST00000247003 WDR89Q96FK6 387 aaPredicted RBP13.16□□□□□ -0.3
DDX49-201ENST00000247003 ARL6Q9H0F7 186 aa13.16□□□□□ -0.3
DDX49-201ENST00000247003 LDAHQ9H6V9 325 aa13.16□□□□□ -0.3
DDX49-201ENST00000247003 BCO1Q9HAY6 547 aa13.16□□□□□ -0.3
DDX49-201ENST00000247003 PCDHB16Q9NRJ7 776 aa13.16□□□□□ -0.3
DDX49-201ENST00000247003 PLATP00750 562 aa13.16□□□□□ -0.3
DDX49-201ENST00000247003 FPR2P25090 351 aa13.16□□□□□ -0.3
DDX49-201ENST00000247003 FUT6P51993 359 aa13.16□□□□□ -0.3
DDX49-201ENST00000247003 FAM3AP98173 230 aa13.16□□□□□ -0.3
DDX49-201ENST00000247003 SLC10A1Q14973 349 aa13.16□□□□□ -0.3
DDX49-201ENST00000247003 OR8B8Q15620 311 aa13.16□□□□□ -0.3
DDX49-201ENST00000247003 CLLU1Q5K131 121 aa13.16□□□□□ -0.3
DDX49-201ENST00000247003 LY6G6FQ5SQ64 297 aa13.16□□□□□ -0.3
DDX49-201ENST00000247003 PLCXD3Q63HM9 321 aa13.16□□□□□ -0.3
DDX49-201ENST00000247003 TMUB2Q71RG4 321 aa13.16□□□□□ -0.3
DDX49-201ENST00000247003 TMEM178AQ8NBL3 297 aa13.16□□□□□ -0.3
DDX49-201ENST00000247003 FGFBP3Q8TAT2 258 aa13.16□□□□□ -0.3
DDX49-201ENST00000247003 CASTOR1Q8WTX7 329 aa13.16□□□□□ -0.3
DDX49-201ENST00000247003 ST8SIA4Q92187 359 aa13.16□□□□□ -0.3
DDX49-201ENST00000247003 Q96M66 194 aa13.16□□□□□ -0.3
DDX49-201ENST00000247003 TUBAL3A6NHL2 446 aa13.15□□□□□ -0.3
DDX49-201ENST00000247003 DUS4LO95620 317 aaKnown RBP13.15□□□□□ -0.3
DDX49-201ENST00000247003 CD8AP01732 235 aa13.15□□□□□ -0.3
DDX49-201ENST00000247003 RPA2P15927 270 aa13.15□□□□□ -0.3
DDX49-201ENST00000247003 ZNF92Q03936 586 aa13.15□□□□□ -0.3
DDX49-201ENST00000247003 IKZF1Q13422 519 aa13.15□□□□□ -0.3
DDX49-201ENST00000247003 TMEM128Q5BJH2 165 aa13.15□□□□□ -0.3
DDX49-201ENST00000247003 C9orf135Q5VTT2 229 aa13.15□□□□□ -0.3
DDX49-201ENST00000247003 TMEM42Q69YG0 159 aa13.15□□□□□ -0.3
DDX49-201ENST00000247003 GLRX5Q86SX6 157 aa13.15□□□□□ -0.3
DDX49-201ENST00000247003 C1QTNF5Q9BXJ0 243 aa13.15□□□□□ -0.3
DDX49-201ENST00000247003 PPA2Q9H2U2 334 aa13.15□□□□□ -0.3
DDX49-201ENST00000247003 ACKR4Q9NPB9 350 aa13.15□□□□□ -0.3
DDX49-201ENST00000247003 EHFQ9NZC4 300 aa13.15□□□□□ -0.3
DDX49-201ENST00000247003 LINC00862A6NCI5 91 aa13.14□□□□□ -0.31
DDX49-201ENST00000247003 FAM25EA8MYX2 175 aa13.14□□□□□ -0.31
DDX49-201ENST00000247003 SPRY1O43609 319 aaPredicted RBP13.14□□□□□ -0.31
DDX49-201ENST00000247003 CCNOP22674 350 aa13.14□□□□□ -0.31
DDX49-201ENST00000247003 ECI1P42126 302 aa13.14□□□□□ -0.31
DDX49-201ENST00000247003 ARPC4P59998 168 aa13.14□□□□□ -0.31
DDX49-201ENST00000247003 MALLQ13021 153 aa13.14□□□□□ -0.31
DDX49-201ENST00000247003 MOB3CQ70IA8 216 aa13.14□□□□□ -0.31
DDX49-201ENST00000247003 ZFP62Q8NB50 900 aaPredicted RBP13.14□□□□□ -0.31
DDX49-201ENST00000247003 ADAD2Q8NCV1 583 aaKnown RBP13.14□□□□□ -0.31
DDX49-201ENST00000247003 PIGCQ92535 297 aa13.14□□□□□ -0.31
DDX49-201ENST00000247003 COL25A1Q9BXS0 654 aaPredicted RBP13.14□□□□□ -0.31
DDX49-201ENST00000247003 MFFQ9GZY8 342 aa13.14□□□□□ -0.31
DDX49-201ENST00000247003 A0A096LPE4 126 aa13.13□□□□□ -0.31
DDX49-201ENST00000247003 A0A1W2PPZ6 126 aa13.13□□□□□ -0.31
DDX49-201ENST00000247003 OR5H14A6NHG9 310 aa13.13□□□□□ -0.31
DDX49-201ENST00000247003 EFSO43281 561 aa13.13□□□□□ -0.31
DDX49-201ENST00000247003 ANGPTL7O43827 346 aa13.13□□□□□ -0.31
DDX49-201ENST00000247003 COX5BP10606 129 aa13.13□□□□□ -0.31
DDX49-201ENST00000247003 HLA-GP17693 338 aa13.13□□□□□ -0.31
DDX49-201ENST00000247003 ARR3P36575 388 aa13.13□□□□□ -0.31
DDX49-201ENST00000247003 NPY4RP50391 375 aa13.13□□□□□ -0.31
DDX49-201ENST00000247003 PRSS12P56730 875 aa13.13□□□□□ -0.31
DDX49-201ENST00000247003 SRSF4Q08170 494 aaKnown RBP13.13□□□□□ -0.31
DDX49-201ENST00000247003 ZNF766Q5HY98 468 aa13.13□□□□□ -0.31
DDX49-201ENST00000247003 KCTD9Q7L273 389 aa13.13□□□□□ -0.31
DDX49-201ENST00000247003 C6orf201Q7Z4U5 140 aa13.13□□□□□ -0.31
DDX49-201ENST00000247003 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.13□□□□□ -0.31
DDX49-201ENST00000247003 OR5AP2Q8NGF4 316 aa13.13□□□□□ -0.31
DDX49-201ENST00000247003 SPSB4Q96A44 273 aa13.13□□□□□ -0.31
DDX49-201ENST00000247003 MRPS24Q96EL2 167 aaKnown RBP13.13□□□□□ -0.31
DDX49-201ENST00000247003 EDARQ9UNE0 448 aa13.13□□□□□ -0.31
DDX49-201ENST00000247003 CCSO14618 274 aa13.13□□□□□ -0.31
DDX49-201ENST00000247003 CD79AP11912 226 aa13.13□□□□□ -0.31
DDX49-201ENST00000247003 EDN3P14138 238 aa13.13□□□□□ -0.31
DDX49-201ENST00000247003 PLP2Q04941 152 aa13.13□□□□□ -0.31
DDX49-201ENST00000247003 HLXQ14774 488 aaPredicted RBP13.13□□□□□ -0.31
DDX49-201ENST00000247003 ESCO2Q56NI9 601 aa13.13□□□□□ -0.31
DDX49-201ENST00000247003 ATP1A1-AS1Q5TC04 95 aa13.13□□□□□ -0.31
DDX49-201ENST00000247003 GSG1LQ6UXU4 331 aa13.13□□□□□ -0.31
DDX49-201ENST00000247003 ZNF546Q86UE3 836 aa13.13□□□□□ -0.31
DDX49-201ENST00000247003 CPEB3Q8NE35 698 aaKnown RBP13.13□□□□□ -0.31
DDX49-201ENST00000247003 EMG1Q92979 244 aaKnown RBP13.13□□□□□ -0.31
DDX49-201ENST00000247003 ZNF230Q9UIE0 474 aaPredicted RBP13.13□□□□□ -0.31
DDX49-201ENST00000247003 HSF4Q9ULV5 492 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms