RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 M0R135 149 aa12.59□□□□□ -0.39
HIF3A-202ENST00000244303 GPR31O00270 319 aa12.59□□□□□ -0.39
HIF3A-202ENST00000244303 ZIC3O60481 467 aa12.59□□□□□ -0.39
HIF3A-202ENST00000244303 EIF1BO60739 113 aaKnown RBP12.59□□□□□ -0.39
HIF3A-202ENST00000244303 COX6A1P12074 109 aa12.59□□□□□ -0.39
HIF3A-202ENST00000244303 OTX1P32242 354 aaPredicted RBP12.59□□□□□ -0.39
HIF3A-202ENST00000244303 ZNF133P52736 654 aaPredicted RBP12.59□□□□□ -0.39
HIF3A-202ENST00000244303 DSCR4P56555 118 aaPredicted RBP12.59□□□□□ -0.39
HIF3A-202ENST00000244303 HIST1H3AP68431 136 aa12.59□□□□□ -0.39
HIF3A-202ENST00000244303 HIST2H3PS2Q5TEC6 136 aa12.59□□□□□ -0.39
HIF3A-202ENST00000244303 PRSS54Q6PEW0 395 aa12.59□□□□□ -0.39
HIF3A-202ENST00000244303 UQCC3Q6UW78 93 aa12.59□□□□□ -0.39
HIF3A-202ENST00000244303 HIST2H3AQ71DI3 136 aa12.59□□□□□ -0.39
HIF3A-202ENST00000244303 BAP18Q8IXM2 172 aa12.59□□□□□ -0.39
HIF3A-202ENST00000244303 SVBPQ8N300 66 aa12.59□□□□□ -0.39
HIF3A-202ENST00000244303 SLC30A7Q8NEW0 376 aa12.59□□□□□ -0.39
HIF3A-202ENST00000244303 PAQR8Q8TEZ7 354 aa12.59□□□□□ -0.39
HIF3A-202ENST00000244303 HAS2Q92819 552 aa12.59□□□□□ -0.39
HIF3A-202ENST00000244303 ZNF837Q96EG3 531 aaPredicted RBP12.59□□□□□ -0.39
HIF3A-202ENST00000244303 ZNF799Q96GE5 643 aa12.59□□□□□ -0.39
HIF3A-202ENST00000244303 TM2D1Q9BX74 207 aa12.59□□□□□ -0.39
HIF3A-202ENST00000244303 ZNF701Q9NV72 531 aaPredicted RBP12.59□□□□□ -0.39
HIF3A-202ENST00000244303 PLEK2Q9NYT0 353 aa12.59□□□□□ -0.39
HIF3A-202ENST00000244303 NDRG3Q9UGV2 375 aa12.59□□□□□ -0.39
HIF3A-202ENST00000244303 DKKL1Q9UK85 242 aa12.59□□□□□ -0.39
HIF3A-202ENST00000244303 NCKAP5O14513 1909 aa12.58□□□□□ -0.39
HIF3A-202ENST00000244303 VAMP5O95183 116 aa12.58□□□□□ -0.4
HIF3A-202ENST00000244303 RPS2P15880 293 aaKnown RBP12.58□□□□□ -0.4
HIF3A-202ENST00000244303 CTAG1AP78358 180 aa12.58□□□□□ -0.4
HIF3A-202ENST00000244303 SNAI3Q3KNW1 292 aa12.58□□□□□ -0.4
HIF3A-202ENST00000244303 CHRFAM7AQ494W8 412 aa12.58□□□□□ -0.4
HIF3A-202ENST00000244303 DRAM2Q6UX65 266 aa12.58□□□□□ -0.4
HIF3A-202ENST00000244303 SLC16A14Q7RTX9 510 aa12.58□□□□□ -0.4
HIF3A-202ENST00000244303 FBXO17Q96EF6 278 aa12.58□□□□□ -0.4
HIF3A-202ENST00000244303 FOXD3Q9UJU5 478 aaPredicted RBP12.58□□□□□ -0.4
HIF3A-202ENST00000244303 IGKV1D-8A0A087WSZ0 117 aa12.58□□□□□ -0.4
HIF3A-202ENST00000244303 SERPINE3A8MV23 424 aa12.58□□□□□ -0.4
HIF3A-202ENST00000244303 TNFSF11O14788 317 aa12.58□□□□□ -0.4
HIF3A-202ENST00000244303 LYL1P12980 280 aa12.58□□□□□ -0.4
HIF3A-202ENST00000244303 CPT2P23786 658 aa12.58□□□□□ -0.4
HIF3A-202ENST00000244303 GABRR1P24046 479 aa12.58□□□□□ -0.4
HIF3A-202ENST00000244303 SSR4P51571 173 aa12.58□□□□□ -0.4
HIF3A-202ENST00000244303 NAAAQ02083 359 aa12.58□□□□□ -0.4
HIF3A-202ENST00000244303 AIMP2Q13155 320 aaKnown RBP12.58□□□□□ -0.4
HIF3A-202ENST00000244303 RAB32Q13637 225 aa12.58□□□□□ -0.4
HIF3A-202ENST00000244303 C6orf201Q7Z4U5 140 aa12.58□□□□□ -0.4
HIF3A-202ENST00000244303 OR51F2Q8NH61 342 aa12.58□□□□□ -0.4
HIF3A-202ENST00000244303 RHBDD1Q8TEB9 315 aa12.58□□□□□ -0.4
HIF3A-202ENST00000244303 TMED6Q8WW62 240 aa12.58□□□□□ -0.4
HIF3A-202ENST00000244303 ZNF775Q96BV0 537 aaPredicted RBP12.58□□□□□ -0.4
HIF3A-202ENST00000244303 NECAB3Q96P71 396 aaPredicted RBP12.58□□□□□ -0.4
HIF3A-202ENST00000244303 PIGQQ9BRB3 760 aa12.58□□□□□ -0.4
HIF3A-202ENST00000244303 NAA11Q9BSU3 229 aaPredicted RBP12.58□□□□□ -0.4
HIF3A-202ENST00000244303 ULBP2Q9BZM5 246 aa12.58□□□□□ -0.4
HIF3A-202ENST00000244303 ZNF700Q9H0M5 742 aa12.58□□□□□ -0.4
HIF3A-202ENST00000244303 MCTS1Q9ULC4 181 aaKnown RBP12.58□□□□□ -0.4
HIF3A-202ENST00000244303 HS3ST3B1Q9Y662 390 aa12.58□□□□□ -0.4
HIF3A-202ENST00000244303 A0A0J9YW62 118 aa12.57□□□□□ -0.4
HIF3A-202ENST00000244303 TMEM218A2RU14 115 aa12.57□□□□□ -0.4
HIF3A-202ENST00000244303 RAB19A4D1S5 217 aa12.57□□□□□ -0.4
HIF3A-202ENST00000244303 ZNF98A6NK75 572 aa12.57□□□□□ -0.4
HIF3A-202ENST00000244303 MASP2O00187 686 aa12.57□□□□□ -0.4
HIF3A-202ENST00000244303 KLF7O75840 302 aaPredicted RBP12.57□□□□□ -0.4
HIF3A-202ENST00000244303 KNG1P01042 644 aa12.57□□□□□ -0.4
HIF3A-202ENST00000244303 HOXB5P09067 269 aa12.57□□□□□ -0.4
HIF3A-202ENST00000244303 PVALBP20472 110 aaPredicted RBP12.57□□□□□ -0.4
HIF3A-202ENST00000244303 EXT1Q16394 746 aa12.57□□□□□ -0.4
HIF3A-202ENST00000244303 NKAPLQ5M9Q1 402 aa12.57□□□□□ -0.4
HIF3A-202ENST00000244303 SLC23A3Q6PIS1 610 aa12.57□□□□□ -0.4
HIF3A-202ENST00000244303 Q6ZSR3 168 aa12.57□□□□□ -0.4
HIF3A-202ENST00000244303 GALNTL5Q7Z4T8 443 aa12.57□□□□□ -0.4
HIF3A-202ENST00000244303 ZIC4Q8N9L1 334 aa12.57□□□□□ -0.4
HIF3A-202ENST00000244303 C2orf50Q96LR7 162 aa12.57□□□□□ -0.4
HIF3A-202ENST00000244303 ATPIF1Q9UII2 106 aa12.57□□□□□ -0.4
HIF3A-202ENST00000244303 PCDHGA1Q9Y5H4 931 aa12.57□□□□□ -0.4
HIF3A-202ENST00000244303 C9J4A7 227 aa12.57□□□□□ -0.4
HIF3A-202ENST00000244303 ZNF84P51523 738 aa12.57□□□□□ -0.4
HIF3A-202ENST00000244303 PUSL1Q8N0Z8 303 aaKnown RBP12.57□□□□□ -0.4
HIF3A-202ENST00000244303 TMEM156Q8N614 296 aa12.57□□□□□ -0.4
HIF3A-202ENST00000244303 RNF141Q8WVD5 230 aa12.57□□□□□ -0.4
HIF3A-202ENST00000244303 EMG1Q92979 244 aaKnown RBP12.57□□□□□ -0.4
HIF3A-202ENST00000244303 SPTSSAQ969W0 71 aa12.57□□□□□ -0.4
HIF3A-202ENST00000244303 HDHD3Q9BSH5 251 aaPredicted RBP12.57□□□□□ -0.4
HIF3A-202ENST00000244303 SRXN1Q9BYN0 137 aa12.57□□□□□ -0.4
HIF3A-202ENST00000244303 GPR173Q9NS66 373 aa12.57□□□□□ -0.4
HIF3A-202ENST00000244303 TMEM100Q9NV29 134 aa12.57□□□□□ -0.4
HIF3A-202ENST00000244303 FREM2Q5SZK8 3169 aa12.56□□□□□ -0.4
HIF3A-202ENST00000244303 F8W036 122 aa12.56□□□□□ -0.4
HIF3A-202ENST00000244303 ACTL6AO96019 429 aa12.56□□□□□ -0.4
HIF3A-202ENST00000244303 CD79AP11912 226 aa12.56□□□□□ -0.4
HIF3A-202ENST00000244303 PTGER4P35408 488 aa12.56□□□□□ -0.4
HIF3A-202ENST00000244303 HOXA1P49639 335 aaPredicted RBP12.56□□□□□ -0.4
HIF3A-202ENST00000244303 BLOC1S1P78537 153 aa12.56□□□□□ -0.4
HIF3A-202ENST00000244303 ZNF585AQ6P3V2 769 aa12.56□□□□□ -0.4
HIF3A-202ENST00000244303 TMEM200AQ86VY9 491 aa12.56□□□□□ -0.4
HIF3A-202ENST00000244303 LDLRAD3Q86YD5 345 aa12.56□□□□□ -0.4
HIF3A-202ENST00000244303 SPAG16Q8N0X2 631 aa12.56□□□□□ -0.4
HIF3A-202ENST00000244303 POC1AQ8NBT0 407 aa12.56□□□□□ -0.4
HIF3A-202ENST00000244303 OR2AE1Q8NHA4 323 aa12.56□□□□□ -0.4
HIF3A-202ENST00000244303 SGK3Q96BR1 496 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms