RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 SIX6O95475 246 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 CER1O95813 267 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 NMBP08949 121 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 MGMTP16455 207 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 ZNF43P17038 809 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 ZP3P21754 424 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 ZBTB25P24278 435 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 CD34P28906 385 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 MPGP29372 298 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 ZNF93P35789 620 aaPredicted RBP6.87□□□□□ -1.31
CXCR4-201ENST00000241393 CBX5P45973 191 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 TAS2R31P59538 309 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 RPS27AP62979 156 aaKnown RBP6.87□□□□□ -1.31
CXCR4-201ENST00000241393 UBA52P62987 128 aaKnown RBP6.87□□□□□ -1.31
CXCR4-201ENST00000241393 UNC119Q13432 240 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 OR2F1Q13607 317 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 IL11RAQ14626 422 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 PNLIPRP3Q17RR3 467 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 CDNFQ49AH0 187 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 FAM69BQ5VUD6 431 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 CFAP77Q6ZQR2 320 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 LYG2Q86SG7 212 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 TRAPPC6BQ86SZ2 158 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 BEST3Q8N1M1 668 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 GTPBP8Q8N3Z3 284 aaPredicted RBP6.87□□□□□ -1.31
CXCR4-201ENST00000241393 EIF4E3Q8N5X7 224 aaKnown RBP6.87□□□□□ -1.31
CXCR4-201ENST00000241393 ACBD4Q8NC06 268 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 STEAP2Q8NFT2 490 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 OR52L2PQ8NGH6 319 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 OR5M9Q8NGP3 310 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 OR10R2Q8NGX6 335 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 KCNG3Q8TAE7 436 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 NTNG2Q96CW9 530 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 DAZAP1Q96EP5 407 aaKnown RBP6.87□□□□□ -1.31
CXCR4-201ENST00000241393 RASL10BQ96S79 203 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 SLC6A7Q99884 636 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 EMC6Q9BV81 110 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 B3GNT4Q9C0J1 378 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 RDH8Q9NYR8 311 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 TRAV14DV4A0A0A6YYC5 116 aa6.86□□□□□ -1.31
CXCR4-201ENST00000241393 LOC101059948A0A1B0GTJ6 334 aa6.86□□□□□ -1.31
CXCR4-201ENST00000241393 XIRP2A4UGR9 3374 aa6.86□□□□□ -1.31
CXCR4-201ENST00000241393 MFSD2BA6NFX1 497 aa6.86□□□□□ -1.31
CXCR4-201ENST00000241393 WIPF3A6NGB9 483 aa6.86□□□□□ -1.31
CXCR4-201ENST00000241393 ZNF726A6NNF4 738 aa6.86□□□□□ -1.31
CXCR4-201ENST00000241393 CEACAM18A8MTB9 384 aa6.86□□□□□ -1.31
CXCR4-201ENST00000241393 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.86□□□□□ -1.31
CXCR4-201ENST00000241393 KRBOX1C9JBD0 128 aa6.86□□□□□ -1.31
CXCR4-201ENST00000241393 EIF1BO60739 113 aaKnown RBP6.86□□□□□ -1.31
CXCR4-201ENST00000241393 VAMP5O95183 116 aa6.86□□□□□ -1.31
CXCR4-201ENST00000241393 TNFRSF1AP19438 455 aa6.86□□□□□ -1.31
CXCR4-201ENST00000241393 ALDH3B1P43353 468 aa6.86□□□□□ -1.31
CXCR4-201ENST00000241393 TRA2AQ13595 282 aaKnown RBP eCLIP6.86□□□□□ -1.31
CXCR4-201ENST00000241393 ARL6IP1Q15041 203 aa6.86□□□□□ -1.31
CXCR4-201ENST00000241393 TAF13Q15543 124 aa6.86□□□□□ -1.31
CXCR4-201ENST00000241393 EXT1Q16394 746 aa6.86□□□□□ -1.31
CXCR4-201ENST00000241393 VAX1Q5SQQ9 334 aa6.86□□□□□ -1.31
CXCR4-201ENST00000241393 C10orf128Q5T292 105 aa6.86□□□□□ -1.31
CXCR4-201ENST00000241393 AWAT2Q6E213 333 aa6.86□□□□□ -1.31
CXCR4-201ENST00000241393 OR10K2Q6IF99 312 aa6.86□□□□□ -1.31
CXCR4-201ENST00000241393 OPN5Q6U736 354 aa6.86□□□□□ -1.31
CXCR4-201ENST00000241393 Q6ZSR3 168 aa6.86□□□□□ -1.31
CXCR4-201ENST00000241393 TMPPEQ6ZT21 453 aa6.86□□□□□ -1.31
CXCR4-201ENST00000241393 FOXL2NBQ6ZUU3 175 aa6.86□□□□□ -1.31
CXCR4-201ENST00000241393 HSD17B13Q7Z5P4 300 aaPredicted RBP6.86□□□□□ -1.31
CXCR4-201ENST00000241393 TMED4Q7Z7H5 227 aa6.86□□□□□ -1.31
CXCR4-201ENST00000241393 MOGAT3Q86VF5 341 aa6.86□□□□□ -1.31
CXCR4-201ENST00000241393 OR5AS1Q8N127 324 aa6.86□□□□□ -1.31
CXCR4-201ENST00000241393 ARRDC1Q8N5I2 433 aa6.86□□□□□ -1.31
CXCR4-201ENST00000241393 KCNRGQ8N5I3 272 aa6.86□□□□□ -1.31
CXCR4-201ENST00000241393 WDSUB1Q8N9V3 476 aa6.86□□□□□ -1.31
CXCR4-201ENST00000241393 MITD1Q8WV92 249 aa6.86□□□□□ -1.31
CXCR4-201ENST00000241393 INTS12Q96CB8 462 aaKnown RBP6.86□□□□□ -1.31
CXCR4-201ENST00000241393 C10orf35Q96D05 121 aa6.86□□□□□ -1.31
CXCR4-201ENST00000241393 OR5B2Q96R09 309 aa6.86□□□□□ -1.31
CXCR4-201ENST00000241393 REG4Q9BYZ8 158 aa6.86□□□□□ -1.31
CXCR4-201ENST00000241393 PRO3102Q9H379 93 aa6.86□□□□□ -1.31
CXCR4-201ENST00000241393 PNRC2Q9NPJ4 139 aaKnown RBP6.86□□□□□ -1.31
CXCR4-201ENST00000241393 IFT46Q9NQC8 304 aa6.86□□□□□ -1.31
CXCR4-201ENST00000241393 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.86□□□□□ -1.31
CXCR4-201ENST00000241393 FSCN3Q9NQT6 498 aa6.86□□□□□ -1.31
CXCR4-201ENST00000241393 SDHAF2Q9NX18 166 aa6.86□□□□□ -1.31
CXCR4-201ENST00000241393 COMMD9Q9P000 198 aa6.86□□□□□ -1.31
CXCR4-201ENST00000241393 FOXJ2Q9P0K8 574 aa6.86□□□□□ -1.31
CXCR4-201ENST00000241393 CHCHD2Q9Y6H1 151 aaPredicted RBP6.86□□□□□ -1.31
CXCR4-201ENST00000241393 A0A0B4J2A0 478 aa6.85□□□□□ -1.31
CXCR4-201ENST00000241393 OR5H14A6NHG9 310 aa6.85□□□□□ -1.31
CXCR4-201ENST00000241393 ZSCAN5BA6NJL1 495 aa6.85□□□□□ -1.31
CXCR4-201ENST00000241393 CA11O75493 328 aa6.85□□□□□ -1.31
CXCR4-201ENST00000241393 STK17BO94768 372 aa6.85□□□□□ -1.31
CXCR4-201ENST00000241393 IGLV3-1P01715 115 aa6.85□□□□□ -1.31
CXCR4-201ENST00000241393 HLA-AP01891 365 aaKnown RBP6.85□□□□□ -1.31
CXCR4-201ENST00000241393 APOC1P02654 83 aa6.85□□□□□ -1.31
CXCR4-201ENST00000241393 PRF1P14222 555 aa6.85□□□□□ -1.31
CXCR4-201ENST00000241393 DUSP1P28562 367 aa6.85□□□□□ -1.31
CXCR4-201ENST00000241393 THBS4P35443 961 aa6.85□□□□□ -1.31
CXCR4-201ENST00000241393 PCP4P48539 62 aa6.85□□□□□ -1.31
CXCR4-201ENST00000241393 FOXL2P58012 376 aa6.85□□□□□ -1.31
CXCR4-201ENST00000241393 ZNF121P58317 390 aaPredicted RBP6.85□□□□□ -1.31
CXCR4-201ENST00000241393 H3F3AP84243 136 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms