RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 HTR5AP47898 357 aa9.25□□□□□ -0.93
CDCA3-201ENST00000229265 GZMKP49863 264 aa9.25□□□□□ -0.93
CDCA3-201ENST00000229265 ATP1B3P54709 279 aa9.25□□□□□ -0.93
CDCA3-201ENST00000229265 RPS27AP62979 156 aaKnown RBP9.25□□□□□ -0.93
CDCA3-201ENST00000229265 SRYQ05066 204 aa9.25□□□□□ -0.93
CDCA3-201ENST00000229265 CBX3Q13185 183 aa9.25□□□□□ -0.93
CDCA3-201ENST00000229265 GK2Q14410 553 aaPredicted RBP9.25□□□□□ -0.93
CDCA3-201ENST00000229265 UBE2V2Q15819 145 aa9.25□□□□□ -0.93
CDCA3-201ENST00000229265 SFRP4Q6FHJ7 346 aaPredicted RBP9.25□□□□□ -0.93
CDCA3-201ENST00000229265 ZNF774Q6NX45 483 aa9.25□□□□□ -0.93
CDCA3-201ENST00000229265 UNQ6126/PRO20091Q6UXV3 157 aa9.25□□□□□ -0.93
CDCA3-201ENST00000229265 ZNF782Q6ZMW2 699 aaPredicted RBP9.25□□□□□ -0.93
CDCA3-201ENST00000229265 IZUMO1Q8IYV9 350 aa9.25□□□□□ -0.93
CDCA3-201ENST00000229265 Q8NFD4 153 aa9.25□□□□□ -0.93
CDCA3-201ENST00000229265 FNDC9Q8TBE3 224 aa9.25□□□□□ -0.93
CDCA3-201ENST00000229265 ITLN2Q8WWU7 325 aaPredicted RBP9.25□□□□□ -0.93
CDCA3-201ENST00000229265 APOBEC3DQ96AK3 386 aaPredicted RBP9.25□□□□□ -0.93
CDCA3-201ENST00000229265 ZNF775Q96BV0 537 aaPredicted RBP9.25□□□□□ -0.93
CDCA3-201ENST00000229265 C1orf147Q96MC9 270 aaPredicted RBP9.25□□□□□ -0.93
CDCA3-201ENST00000229265 GPER1Q99527 375 aa9.25□□□□□ -0.93
CDCA3-201ENST00000229265 REPIN1Q9BWE0 567 aaKnown RBP9.25□□□□□ -0.93
CDCA3-201ENST00000229265 METTL9Q9H1A3 318 aa9.25□□□□□ -0.93
CDCA3-201ENST00000229265 DEFB127Q9H1M4 99 aa9.25□□□□□ -0.93
CDCA3-201ENST00000229265 C20orf85Q9H1P6 137 aa9.25□□□□□ -0.93
CDCA3-201ENST00000229265 HSF4Q9ULV5 492 aa9.25□□□□□ -0.93
CDCA3-201ENST00000229265 ANAPC10Q9UM13 185 aa9.25□□□□□ -0.93
CDCA3-201ENST00000229265 EDARQ9UNE0 448 aa9.25□□□□□ -0.93
CDCA3-201ENST00000229265 LIPGQ9Y5X9 500 aa9.25□□□□□ -0.93
CDCA3-201ENST00000229265 NPTNQ9Y639 398 aa9.25□□□□□ -0.93
CDCA3-201ENST00000229265 TACC2O95359 2948 aa9.25□□□□□ -0.93
CDCA3-201ENST00000229265 CELSR1Q9NYQ6 3014 aa9.25□□□□□ -0.93
CDCA3-201ENST00000229265 MEIKINA0A087WXM9 373 aa9.24□□□□□ -0.93
CDCA3-201ENST00000229265 ZNF816-ZNF321PA0A0X1KG74 233 aa9.24□□□□□ -0.93
CDCA3-201ENST00000229265 FAM90A10PA6NDY2 464 aa9.24□□□□□ -0.93
CDCA3-201ENST00000229265 FAM90A18PA6NE21 464 aa9.24□□□□□ -0.93
CDCA3-201ENST00000229265 FAM90A16PA6NEW6 464 aa9.24□□□□□ -0.93
CDCA3-201ENST00000229265 FAM90A20PA6NIJ5 464 aa9.24□□□□□ -0.93
CDCA3-201ENST00000229265 FAM90A8PA6NJQ4 464 aa9.24□□□□□ -0.93
CDCA3-201ENST00000229265 FAM90A7PA6NKC0 464 aa9.24□□□□□ -0.93
CDCA3-201ENST00000229265 FAM90A22PA8MWA6 464 aa9.24□□□□□ -0.93
CDCA3-201ENST00000229265 FAM90A12PA8MX19 464 aa9.24□□□□□ -0.93
CDCA3-201ENST00000229265 FAM90A5PA8MXJ8 464 aa9.24□□□□□ -0.93
CDCA3-201ENST00000229265 FAM90A23PA8MXZ1 464 aa9.24□□□□□ -0.93
CDCA3-201ENST00000229265 ZNF736B4DX44 427 aaPredicted RBP9.24□□□□□ -0.93
CDCA3-201ENST00000229265 CDC14BO60729 498 aa9.24□□□□□ -0.93
CDCA3-201ENST00000229265 RAB3DO95716 219 aa9.24□□□□□ -0.93
CDCA3-201ENST00000229265 CST4P01036 141 aa9.24□□□□□ -0.93
CDCA3-201ENST00000229265 NRASP01111 189 aa9.24□□□□□ -0.93
CDCA3-201ENST00000229265 MT-ND4P03905 459 aa9.24□□□□□ -0.93
CDCA3-201ENST00000229265 FAM90A15PP0C7V4 464 aa9.24□□□□□ -0.93
CDCA3-201ENST00000229265 FAM90A13PP0C7W8 464 aa9.24□□□□□ -0.93
CDCA3-201ENST00000229265 FAM90A14PP0C7W9 464 aa9.24□□□□□ -0.93
CDCA3-201ENST00000229265 FAM90A24PP0C7X0 464 aa9.24□□□□□ -0.93
CDCA3-201ENST00000229265 SULT1A3P0DMM9 295 aa9.24□□□□□ -0.93
CDCA3-201ENST00000229265 SULT1A4P0DMN0 295 aa9.24□□□□□ -0.93
CDCA3-201ENST00000229265 TMIGD3P0DMS9 266 aaPredicted RBP9.24□□□□□ -0.93
CDCA3-201ENST00000229265 SLC2A1P11166 492 aa9.24□□□□□ -0.93
CDCA3-201ENST00000229265 EDN3P14138 238 aa9.24□□□□□ -0.93
CDCA3-201ENST00000229265 CPT2P23786 658 aa9.24□□□□□ -0.93
CDCA3-201ENST00000229265 CCR6P51684 374 aa9.24□□□□□ -0.93
CDCA3-201ENST00000229265 RAB1AP62820 205 aa9.24□□□□□ -0.93
CDCA3-201ENST00000229265 FAM3AP98173 230 aa9.24□□□□□ -0.93
CDCA3-201ENST00000229265 FAPQ12884 760 aa9.24□□□□□ -0.93
CDCA3-201ENST00000229265 UNC119Q13432 240 aa9.24□□□□□ -0.93
CDCA3-201ENST00000229265 MADCAM1Q13477 382 aa9.24□□□□□ -0.93
CDCA3-201ENST00000229265 MPPED2Q15777 294 aa9.24□□□□□ -0.93
CDCA3-201ENST00000229265 PABPC1L2AQ5JQF8 200 aa9.24□□□□□ -0.93
CDCA3-201ENST00000229265 Q6ZTK2 550 aa9.24□□□□□ -0.93
CDCA3-201ENST00000229265 ZNF584Q8IVC4 421 aa9.24□□□□□ -0.93
CDCA3-201ENST00000229265 ZDHHC22Q8N966 263 aa9.24□□□□□ -0.93
CDCA3-201ENST00000229265 C1orf162Q8NEQ5 155 aaPredicted RBP9.24□□□□□ -0.93
CDCA3-201ENST00000229265 RAB3CQ96E17 227 aa9.24□□□□□ -0.93
CDCA3-201ENST00000229265 GAL3ST1Q99999 423 aa9.24□□□□□ -0.93
CDCA3-201ENST00000229265 TMEM59Q9BXS4 323 aa9.24□□□□□ -0.93
CDCA3-201ENST00000229265 GON7Q9BXV9 100 aa9.24□□□□□ -0.93
CDCA3-201ENST00000229265 B3GNT2Q9NY97 397 aa9.24□□□□□ -0.93
CDCA3-201ENST00000229265 KCNN3Q9UGI6 736 aa9.24□□□□□ -0.93
CDCA3-201ENST00000229265 NOP16Q9Y3C1 178 aaKnown RBP9.24□□□□□ -0.93
CDCA3-201ENST00000229265 CACNA1CQ13936 2221 aa9.24□□□□□ -0.93
CDCA3-201ENST00000229265 OTOGQ6ZRI0 2925 aa9.24□□□□□ -0.93
CDCA3-201ENST00000229265 TRAV6A0A075B6T7 132 aa9.23□□□□□ -0.93
CDCA3-201ENST00000229265 hCG_38984A0A1B0GV85 526 aa9.23□□□□□ -0.93
CDCA3-201ENST00000229265 UBE2QL1A1L167 161 aa9.23□□□□□ -0.93
CDCA3-201ENST00000229265 CEACAM18A8MTB9 384 aa9.23□□□□□ -0.93
CDCA3-201ENST00000229265 RGS13O14921 159 aa9.23□□□□□ -0.93
CDCA3-201ENST00000229265 CREBL2O60519 120 aaPredicted RBP9.23□□□□□ -0.93
CDCA3-201ENST00000229265 RGS11O94810 467 aa9.23□□□□□ -0.93
CDCA3-201ENST00000229265 CRYABP02511 175 aaKnown RBP9.23□□□□□ -0.93
CDCA3-201ENST00000229265 GSTT2P0CG29 244 aa9.23□□□□□ -0.93
CDCA3-201ENST00000229265 ANXA3P12429 323 aa9.23□□□□□ -0.93
CDCA3-201ENST00000229265 B4GALT1P15291 398 aa9.23□□□□□ -0.93
CDCA3-201ENST00000229265 C4BPBP20851 252 aa9.23□□□□□ -0.93
CDCA3-201ENST00000229265 AGTR1P30556 359 aa9.23□□□□□ -0.93
CDCA3-201ENST00000229265 ECI1P42126 302 aa9.23□□□□□ -0.93
CDCA3-201ENST00000229265 MTCP1P56278 107 aa9.23□□□□□ -0.93
CDCA3-201ENST00000229265 UBE2MP61081 183 aaKnown RBP9.23□□□□□ -0.93
CDCA3-201ENST00000229265 PLA2G7Q13093 441 aa9.23□□□□□ -0.93
CDCA3-201ENST00000229265 CARTPTQ16568 116 aa9.23□□□□□ -0.93
CDCA3-201ENST00000229265 SRSF7Q16629 238 aaKnown RBP eCLIP9.23□□□□□ -0.93
CDCA3-201ENST00000229265 C4orf17Q53FE4 359 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms