RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 SRD5A1P18405 259 aa10.57□□□□□ -0.72
LSM5-201ENST00000223084 HNF1AP20823 631 aa10.57□□□□□ -0.72
LSM5-201ENST00000223084 PCMT1P22061 227 aa10.57□□□□□ -0.72
LSM5-201ENST00000223084 DCKP27707 260 aa10.57□□□□□ -0.72
LSM5-201ENST00000223084 CFHR2P36980 270 aa10.57□□□□□ -0.72
LSM5-201ENST00000223084 SRP14P37108 136 aaKnown RBP10.57□□□□□ -0.72
LSM5-201ENST00000223084 PITPNBP48739 271 aa10.57□□□□□ -0.72
LSM5-201ENST00000223084 GTF2A1P52655 376 aaPredicted RBP10.57□□□□□ -0.72
LSM5-201ENST00000223084 GBX2P52951 348 aaPredicted RBP10.57□□□□□ -0.72
LSM5-201ENST00000223084 GNB2P62879 340 aa10.57□□□□□ -0.72
LSM5-201ENST00000223084 TMEM244Q5VVB8 128 aa10.57□□□□□ -0.72
LSM5-201ENST00000223084 TEX36Q5VZQ5 186 aa10.57□□□□□ -0.72
LSM5-201ENST00000223084 HAGHLQ6PII5 290 aaPredicted RBP10.57□□□□□ -0.72
LSM5-201ENST00000223084 DUX4L9Q6RFH8 374 aaPredicted RBP10.57□□□□□ -0.72
LSM5-201ENST00000223084 ZNF841Q6ZN19 808 aa10.57□□□□□ -0.72
LSM5-201ENST00000223084 C1orf229Q6ZS94 237 aaPredicted RBP10.57□□□□□ -0.72
LSM5-201ENST00000223084 OR4M2Q8NGB6 313 aa10.57□□□□□ -0.72
LSM5-201ENST00000223084 OR5T2Q8NGG2 359 aa10.57□□□□□ -0.72
LSM5-201ENST00000223084 OR51A4Q8NGJ6 313 aa10.57□□□□□ -0.72
LSM5-201ENST00000223084 OR10Z1Q8NGY1 313 aa10.57□□□□□ -0.72
LSM5-201ENST00000223084 FBLIM1Q8WUP2 373 aa10.57□□□□□ -0.72
LSM5-201ENST00000223084 AQP3Q92482 292 aa10.57□□□□□ -0.72
LSM5-201ENST00000223084 ADAT3Q96EY9 351 aaPredicted RBP10.57□□□□□ -0.72
LSM5-201ENST00000223084 JAM3Q9BX67 310 aa10.57□□□□□ -0.72
LSM5-201ENST00000223084 SNTG1Q9NSN8 517 aa10.57□□□□□ -0.72
LSM5-201ENST00000223084 DUX4Q9UBX2 424 aa10.57□□□□□ -0.72
LSM5-201ENST00000223084 CLEC2DQ9UHP7 191 aa10.57□□□□□ -0.72
LSM5-201ENST00000223084 DIMT1Q9UNQ2 313 aaKnown RBP10.57□□□□□ -0.72
LSM5-201ENST00000223084 LRCH1Q9Y2L9 728 aa10.57□□□□□ -0.72
LSM5-201ENST00000223084 LOC105371242A0A075B767 164 aa10.56□□□□□ -0.72
LSM5-201ENST00000223084 FAM230AA0A1W2PPH8 454 aa10.56□□□□□ -0.72
LSM5-201ENST00000223084 PQLC2LA1A4F0 135 aa10.56□□□□□ -0.72
LSM5-201ENST00000223084 A8MXK9 166 aa10.56□□□□□ -0.72
LSM5-201ENST00000223084 SYNGR1O43759 233 aa10.56□□□□□ -0.72
LSM5-201ENST00000223084 FCN3O75636 299 aa10.56□□□□□ -0.72
LSM5-201ENST00000223084 ADRA2CP18825 462 aa10.56□□□□□ -0.72
LSM5-201ENST00000223084 HAAOP46952 286 aa10.56□□□□□ -0.72
LSM5-201ENST00000223084 CCR9P51686 369 aa10.56□□□□□ -0.72
LSM5-201ENST00000223084 UBE2V2Q15819 145 aa10.56□□□□□ -0.72
LSM5-201ENST00000223084 MICBQ29980 383 aa10.56□□□□□ -0.72
LSM5-201ENST00000223084 WDR25Q64LD2 544 aaPredicted RBP10.56□□□□□ -0.72
LSM5-201ENST00000223084 XAF1Q6GPH4 301 aa10.56□□□□□ -0.72
LSM5-201ENST00000223084 NLRC3Q7RTR2 1065 aa10.56□□□□□ -0.72
LSM5-201ENST00000223084 BATF2Q8N1L9 274 aa10.56□□□□□ -0.72
LSM5-201ENST00000223084 FGFRL1Q8N441 504 aa10.56□□□□□ -0.72
LSM5-201ENST00000223084 ZNF676Q8N7Q3 588 aa10.56□□□□□ -0.72
LSM5-201ENST00000223084 BPIFB6Q8NFQ5 453 aa10.56□□□□□ -0.72
LSM5-201ENST00000223084 FGGYQ96C11 551 aa10.56□□□□□ -0.72
LSM5-201ENST00000223084 TMEM80Q96HE8 168 aa10.56□□□□□ -0.72
LSM5-201ENST00000223084 ZNF488Q96MN9 340 aa10.56□□□□□ -0.72
LSM5-201ENST00000223084 MYCBPQ99417 103 aaPredicted RBP10.56□□□□□ -0.72
LSM5-201ENST00000223084 CCL13Q99616 98 aa10.56□□□□□ -0.72
LSM5-201ENST00000223084 PDCD1LG2Q9BQ51 273 aa10.56□□□□□ -0.72
LSM5-201ENST00000223084 C7orf69Q9H7B7 122 aa10.56□□□□□ -0.72
LSM5-201ENST00000223084 SMURF1Q9HCE7 757 aa10.56□□□□□ -0.72
LSM5-201ENST00000223084 DNAJB11Q9UBS4 358 aa10.56□□□□□ -0.72
LSM5-201ENST00000223084 CLN8Q9UBY8 286 aa10.56□□□□□ -0.72
LSM5-201ENST00000223084 OR5V1Q9UGF6 321 aa10.56□□□□□ -0.72
LSM5-201ENST00000223084 POLR3KQ9Y2Y1 108 aaPredicted RBP10.56□□□□□ -0.72
LSM5-201ENST00000223084 EXOSC1Q9Y3B2 195 aaKnown RBP10.56□□□□□ -0.72
LSM5-201ENST00000223084 RRP15Q9Y3B9 282 aaKnown RBP10.56□□□□□ -0.72
LSM5-201ENST00000223084 SVEP1Q4LDE5 3571 aa10.55□□□□□ -0.72
LSM5-201ENST00000223084 IRGMA1A4Y4 181 aa10.55□□□□□ -0.72
LSM5-201ENST00000223084 ZFPL1O95159 310 aa10.55□□□□□ -0.72
LSM5-201ENST00000223084 ISG15P05161 165 aa10.55□□□□□ -0.72
LSM5-201ENST00000223084 MUC1P15941 1255 aaPredicted RBP10.55□□□□□ -0.72
LSM5-201ENST00000223084 ZNF12P17014 697 aa10.55□□□□□ -0.72
LSM5-201ENST00000223084 MYL12AP19105 171 aa10.55□□□□□ -0.72
LSM5-201ENST00000223084 AMY2BP19961 511 aa10.55□□□□□ -0.72
LSM5-201ENST00000223084 ST3GAL4Q11206 333 aa10.55□□□□□ -0.72
LSM5-201ENST00000223084 KCNJ8Q15842 424 aa10.55□□□□□ -0.72
LSM5-201ENST00000223084 ANGPTL5Q86XS5 388 aa10.55□□□□□ -0.72
LSM5-201ENST00000223084 CCDC54Q8NEL0 328 aa10.55□□□□□ -0.72
LSM5-201ENST00000223084 OR13C3Q8NGS6 347 aa10.55□□□□□ -0.72
LSM5-201ENST00000223084 ZNF671Q8TAW3 534 aa10.55□□□□□ -0.72
LSM5-201ENST00000223084 TECTBQ96PL2 329 aa10.55□□□□□ -0.72
LSM5-201ENST00000223084 CHST5Q9GZS9 411 aa10.55□□□□□ -0.72
LSM5-201ENST00000223084 TRIM36Q9NQ86 728 aa10.55□□□□□ -0.72
LSM5-201ENST00000223084 OPN4Q9UHM6 478 aa10.55□□□□□ -0.72
LSM5-201ENST00000223084 PSORS1C1Q9UIG5 152 aa10.55□□□□□ -0.72
LSM5-201ENST00000223084 HHLA2Q9UM44 414 aa10.55□□□□□ -0.72
LSM5-201ENST00000223084 CAB39Q9Y376 341 aaPredicted RBP10.55□□□□□ -0.72
LSM5-201ENST00000223084 SIRT4Q9Y6E7 314 aaPredicted RBP10.55□□□□□ -0.72
LSM5-201ENST00000223084 IGKV1-27A0A075B6S5 117 aa10.54□□□□□ -0.72
LSM5-201ENST00000223084 PPIAL4CA0A0B4J2A2 164 aa10.54□□□□□ -0.72
LSM5-201ENST00000223084 TRBV2A0A0J9YWF9 115 aa10.54□□□□□ -0.72
LSM5-201ENST00000223084 EFCAB10A6NFE3 127 aa10.54□□□□□ -0.72
LSM5-201ENST00000223084 C22orf46C9J442 243 aa10.54□□□□□ -0.72
LSM5-201ENST00000223084 H0YJX3 145 aa10.54□□□□□ -0.72
LSM5-201ENST00000223084 J3QT63 122 aa10.54□□□□□ -0.72
LSM5-201ENST00000223084 TMPRSS2O15393 492 aa10.54□□□□□ -0.72
LSM5-201ENST00000223084 NDUFA2O43678 99 aa10.54□□□□□ -0.72
LSM5-201ENST00000223084 GATBO75879 557 aaKnown RBP10.54□□□□□ -0.72
LSM5-201ENST00000223084 INMTO95050 263 aa10.54□□□□□ -0.72
LSM5-201ENST00000223084 ATP6V1G2O95670 118 aa10.54□□□□□ -0.72
LSM5-201ENST00000223084 LALBAP00709 142 aa10.54□□□□□ -0.72
LSM5-201ENST00000223084 SELLP14151 372 aa10.54□□□□□ -0.72
LSM5-201ENST00000223084 ZNF20P17024 532 aa10.54□□□□□ -0.72
LSM5-201ENST00000223084 GLRA1P23415 457 aa10.54□□□□□ -0.72
LSM5-201ENST00000223084 GATA3P23771 443 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms