RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 COL9A3Q14050 684 aaPredicted RBP13.2□□□□□ -0.3
SPTLC2-201ENST00000216484 RGS7BPQ6MZT1 257 aaPredicted RBP13.2□□□□□ -0.3
SPTLC2-201ENST00000216484 ETFBKMTQ8IXQ9 262 aa13.2□□□□□ -0.3
SPTLC2-201ENST00000216484 C10orf71Q711Q0 1435 aa13.2□□□□□ -0.3
SPTLC2-201ENST00000216484 A0A1W2PN81 502 aa13.2□□□□□ -0.3
SPTLC2-201ENST00000216484 ACAA1P09110 424 aaPredicted RBP13.2□□□□□ -0.3
SPTLC2-201ENST00000216484 COMPP49747 757 aaPredicted RBP13.2□□□□□ -0.3
SPTLC2-201ENST00000216484 RELBQ01201 579 aa13.2□□□□□ -0.3
SPTLC2-201ENST00000216484 SLC39A5Q6ZMH5 540 aa13.2□□□□□ -0.3
SPTLC2-201ENST00000216484 OR6S1Q8NH40 331 aa13.2□□□□□ -0.3
SPTLC2-201ENST00000216484 CRISPLD2Q9H0B8 497 aa13.2□□□□□ -0.3
SPTLC2-201ENST00000216484 HRO43593 1189 aa13.2□□□□□ -0.3
SPTLC2-201ENST00000216484 CTSLP07711 333 aa13.2□□□□□ -0.3
SPTLC2-201ENST00000216484 KIR2DL1P43626 348 aaPredicted RBP13.2□□□□□ -0.3
SPTLC2-201ENST00000216484 KIR2DL2P43627 348 aaPredicted RBP13.2□□□□□ -0.3
SPTLC2-201ENST00000216484 FLYWCH2Q96CP2 140 aaKnown RBP13.2□□□□□ -0.3
SPTLC2-201ENST00000216484 TEAD3Q99594 435 aa13.2□□□□□ -0.3
SPTLC2-201ENST00000216484 UBTD1Q9HAC8 227 aa13.2□□□□□ -0.3
SPTLC2-201ENST00000216484 TRGV8A0A0C4DH27 118 aa13.2□□□□□ -0.3
SPTLC2-201ENST00000216484 CORTO00230 105 aa13.2□□□□□ -0.3
SPTLC2-201ENST00000216484 INSM1Q01101 510 aaPredicted RBP13.2□□□□□ -0.3
SPTLC2-201ENST00000216484 FBXL14Q8N1E6 418 aa13.2□□□□□ -0.3
SPTLC2-201ENST00000216484 OR10A7Q8NGE5 316 aa13.2□□□□□ -0.3
SPTLC2-201ENST00000216484 RPEQ96AT9 228 aa13.2□□□□□ -0.3
SPTLC2-201ENST00000216484 THYN1Q9P016 225 aa13.2□□□□□ -0.3
SPTLC2-201ENST00000216484 ZNF346Q9UL40 294 aaKnown RBP13.2□□□□□ -0.3
SPTLC2-201ENST00000216484 C1SP09871 688 aa13.2□□□□□ -0.3
SPTLC2-201ENST00000216484 IVDP26440 423 aa13.2□□□□□ -0.3
SPTLC2-201ENST00000216484 CLDN18P56856 261 aa13.2□□□□□ -0.3
SPTLC2-201ENST00000216484 EXD3Q8N9H8 876 aa13.2□□□□□ -0.3
SPTLC2-201ENST00000216484 ZNF385DQ9H6B1 395 aa13.2□□□□□ -0.3
SPTLC2-201ENST00000216484 SNRPGP15A8MWD9 76 aa13.2□□□□□ -0.3
SPTLC2-201ENST00000216484 COX6CP09669 75 aa13.2□□□□□ -0.3
SPTLC2-201ENST00000216484 LGALS7P47929 136 aa13.2□□□□□ -0.3
SPTLC2-201ENST00000216484 LSMEM1Q8N8F7 131 aa13.2□□□□□ -0.3
SPTLC2-201ENST00000216484 ZNF738Q8NE65 137 aa13.2□□□□□ -0.3
SPTLC2-201ENST00000216484 OR1L6Q8NGR2 347 aa13.2□□□□□ -0.3
SPTLC2-201ENST00000216484 SLC25A43Q8WUT9 341 aaPredicted RBP13.2□□□□□ -0.3
SPTLC2-201ENST00000216484 SNX22Q96L94 193 aa13.2□□□□□ -0.3
SPTLC2-201ENST00000216484 INSM2Q96T92 566 aaPredicted RBP13.2□□□□□ -0.3
SPTLC2-201ENST00000216484 JAM3Q9BX67 310 aa13.2□□□□□ -0.3
SPTLC2-201ENST00000216484 FGF21Q9NSA1 209 aa13.2□□□□□ -0.3
SPTLC2-201ENST00000216484 KIDINS220Q9ULH0 1771 aa13.2□□□□□ -0.3
SPTLC2-201ENST00000216484 CD99P14209 185 aa13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 YPEL5P62699 121 aa13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 TMEM179BQ7Z7N9 219 aa13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 EDAQ92838 391 aa13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 ZNF426Q9BUY5 554 aa13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 HAPLN2Q9GZV7 340 aa13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 UQCC1Q9NVA1 299 aa13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 MOB4Q9Y3A3 225 aa13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 DEFB108AA8MXU0 73 aa13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 ADAM20O43506 726 aa13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 SPRY1O43609 319 aaPredicted RBP13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 SLC2A10O95528 541 aa13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 VN1R17PQ8TDU5 208 aa13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 SGK494Q96LW2 274 aa13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 PBOV1Q9GZY1 135 aa13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 ANXA10Q9UJ72 324 aa13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 A0A1B0GUH1 482 aa13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 MASP2O00187 686 aa13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 CA2P00918 260 aa13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 BTF3P20290 206 aaKnown RBP13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 TWIST1Q15672 202 aa13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 FAM174AQ8TBP5 190 aa13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 ASB13Q8WXK3 278 aa13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 TM4SF18Q96CE8 201 aa13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 NEIL1Q96FI4 390 aaPredicted RBP13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 SPTBN2O15020 2390 aa13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 TIMP1P01033 207 aa13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 CD96P40200 585 aa13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 C11orf87Q6NUJ2 197 aa13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 DUSP18Q8NEJ0 188 aa13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 STARD4Q96DR4 205 aa13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 C16orf70Q9BSU1 422 aa13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 CACNA1BQ00975 2339 aa13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 A0A1W2PNR3 127 aa13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 NDUFB3O43676 98 aa13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 OR5C1Q8NGR4 320 aa13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 SH2D2AQ9NP31 389 aa13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 ALPK2Q86TB3 2170 aa13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 SLC35E2P0CK97 266 aa13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 GPNMBQ14956 572 aa13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 SP6Q3SY56 376 aa13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 C19orf54Q5BKX5 351 aa13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 BTLAQ7Z6A9 289 aa13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 LYG1Q8N1E2 194 aa13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 DYNLRB2Q8TF09 96 aa13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 SMIM19Q96E16 107 aa13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 LINC00052Q96N35 136 aa13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 SLC45A2Q9UMX9 530 aa13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 CLDN20P56880 219 aa13.19□□□□□ -0.3
SPTLC2-201ENST00000216484 FUCA1P04066 466 aa13.18□□□□□ -0.3
SPTLC2-201ENST00000216484 NID1P14543 1247 aa13.18□□□□□ -0.3
SPTLC2-201ENST00000216484 TCEAL1Q15170 157 aa13.18□□□□□ -0.3
SPTLC2-201ENST00000216484 ZNF740Q8NDX6 193 aa13.18□□□□□ -0.3
SPTLC2-201ENST00000216484 GPR87Q9BY21 358 aa13.18□□□□□ -0.3
SPTLC2-201ENST00000216484 LHX3Q9UBR4 397 aa13.18□□□□□ -0.3
SPTLC2-201ENST00000216484 TUBGCP6Q96RT7 1819 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms