RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 VKORC1Q9BQB6 163 aa15.11■□□□□ 0.01
PHGDH-232ENST00000641947 NICN1Q9BSH3 213 aa15.11■□□□□ 0.01
PHGDH-232ENST00000641947 PAPOLGQ9BWT3 736 aaKnown RBP15.11■□□□□ 0.01
PHGDH-232ENST00000641947 ACTR6Q9GZN1 396 aa15.11■□□□□ 0.01
PHGDH-232ENST00000641947 BANF2Q9H503 90 aa15.11■□□□□ 0.01
PHGDH-232ENST00000641947 RAB22AQ9UL26 194 aa15.11■□□□□ 0.01
PHGDH-232ENST00000641947 TRAV18A0A075B6X5 111 aa15.1■□□□□ 0.01
PHGDH-232ENST00000641947 IGHV2OR16-5A0A0B4J2B6 119 aa15.1■□□□□ 0.01
PHGDH-232ENST00000641947 J3QW42 95 aa15.1■□□□□ 0.01
PHGDH-232ENST00000641947 CST4P01036 141 aa15.1■□□□□ 0.01
PHGDH-232ENST00000641947 MTCP1P56278 107 aa15.1■□□□□ 0.01
PHGDH-232ENST00000641947 DEFA1P59665 94 aa15.1■□□□□ 0.01
PHGDH-232ENST00000641947 DEFA3P59666 94 aa15.1■□□□□ 0.01
PHGDH-232ENST00000641947 FBXW12Q6X9E4 464 aa15.1■□□□□ 0.01
PHGDH-232ENST00000641947 NRARPQ7Z6K4 114 aa15.1■□□□□ 0.01
PHGDH-232ENST00000641947 OR5L1Q8NGL2 311 aa15.1■□□□□ 0.01
PHGDH-232ENST00000641947 OR10K1Q8NGX5 313 aa15.1■□□□□ 0.01
PHGDH-232ENST00000641947 SLC25A40Q8TBP6 338 aa15.1■□□□□ 0.01
PHGDH-232ENST00000641947 CMBLQ96DG6 245 aa15.1■□□□□ 0.01
PHGDH-232ENST00000641947 NEDD4LQ96PU5 975 aa15.1■□□□□ 0.01
PHGDH-232ENST00000641947 LPAR5Q9H1C0 372 aa15.1■□□□□ 0.01
PHGDH-232ENST00000641947 OPA3Q9H6K4 179 aa15.1■□□□□ 0.01
PHGDH-232ENST00000641947 EIF3KQ9UBQ5 218 aaKnown RBP15.1■□□□□ 0.01
PHGDH-232ENST00000641947 ELF5Q9UKW6 265 aaPredicted RBP15.1■□□□□ 0.01
PHGDH-232ENST00000641947 RAB27BO00194 218 aa15.09■□□□□ 0.01
PHGDH-232ENST00000641947 SPRY1O43609 319 aaPredicted RBP15.09■□□□□ 0.01
PHGDH-232ENST00000641947 CDC14BO60729 498 aa15.09■□□□□ 0.01
PHGDH-232ENST00000641947 PLATP00750 562 aa15.09■□□□□ 0.01
PHGDH-232ENST00000641947 PRKACBP22694 351 aa15.09■□□□□ 0.01
PHGDH-232ENST00000641947 CA7P43166 264 aa15.09■□□□□ 0.01
PHGDH-232ENST00000641947 ZNF83P51522 516 aa15.09■□□□□ 0.01
PHGDH-232ENST00000641947 CAPZA1P52907 286 aa15.09■□□□□ 0.01
PHGDH-232ENST00000641947 GUCA2AQ02747 115 aa15.09■□□□□ 0.01
PHGDH-232ENST00000641947 MRPL49Q13405 166 aaKnown RBP15.09■□□□□ 0.01
PHGDH-232ENST00000641947 IGFBP7Q16270 282 aa15.09■□□□□ 0.01
PHGDH-232ENST00000641947 ALKBH6Q3KRA9 238 aa15.09■□□□□ 0.01
PHGDH-232ENST00000641947 SLC22A6Q4U2R8 563 aa15.09■□□□□ 0.01
PHGDH-232ENST00000641947 FAM169BQ8N8A8 192 aa15.09■□□□□ 0.01
PHGDH-232ENST00000641947 OR1J1Q8NGS3 322 aa15.09■□□□□ 0.01
PHGDH-232ENST00000641947 BORCS8Q96FH0 119 aa15.09■□□□□ 0.01
PHGDH-232ENST00000641947 COX4I2Q96KJ9 171 aa15.09■□□□□ 0.01
PHGDH-232ENST00000641947 ING4Q9UNL4 249 aa15.09■□□□□ 0.01
PHGDH-232ENST00000641947 GABARAPH6UMI1 98 aa15.08■□□□□ 0.01
PHGDH-232ENST00000641947 ANGPTL7O43827 346 aa15.08■□□□□ 0.01
PHGDH-232ENST00000641947 MPIG6BO95866 241 aa15.08■□□□□ 0.01
PHGDH-232ENST00000641947 MPV17P39210 176 aa15.08■□□□□ 0.01
PHGDH-232ENST00000641947 RBP2P50120 134 aa15.08■□□□□ 0.01
PHGDH-232ENST00000641947 ALKBH2Q6NS38 261 aa15.08■□□□□ 0.01
PHGDH-232ENST00000641947 DNM1P46Q6ZS02 220 aa15.08■□□□□ 0.01
PHGDH-232ENST00000641947 LHFPL2Q6ZUX7 228 aa15.08■□□□□ 0.01
PHGDH-232ENST00000641947 OR2W3Q7Z3T1 314 aa15.08■□□□□ 0.01
PHGDH-232ENST00000641947 CALHM1Q8IU99 346 aa15.08■□□□□ 0.01
PHGDH-232ENST00000641947 PNLDC1Q8NA58 520 aaKnown RBP15.08■□□□□ 0.01
PHGDH-232ENST00000641947 MINDY2Q8NBR6 621 aa15.08■□□□□ 0.01
PHGDH-232ENST00000641947 C19orf18Q8NEA5 215 aa15.08■□□□□ 0.01
PHGDH-232ENST00000641947 CSNK2A3Q8NEV1 391 aa15.08■□□□□ 0.01
PHGDH-232ENST00000641947 DIABLOQ9NR28 239 aa15.08■□□□□ 0.01
PHGDH-232ENST00000641947 RABL2AQ9UBK7 228 aaPredicted RBP15.08■□□□□ 0.01
PHGDH-232ENST00000641947 RABL2BQ9UNT1 228 aa15.08■□□□□ 0.01
PHGDH-232ENST00000641947 CFAP46Q8IYW2 2715 aa15.08■□□□□ 0
PHGDH-232ENST00000641947 IGKV1-12A0A0C4DH73 117 aa15.08■□□□□ 0
PHGDH-232ENST00000641947 ERVH48-1M5A8F1 160 aa15.08■□□□□ 0
PHGDH-232ENST00000641947 ORC5O43913 435 aa15.08■□□□□ 0
PHGDH-232ENST00000641947 IGKV1D-12P01611 117 aa15.08■□□□□ 0
PHGDH-232ENST00000641947 SFTPCP11686 197 aa15.08■□□□□ 0
PHGDH-232ENST00000641947 FUT6P51993 359 aa15.08■□□□□ 0
PHGDH-232ENST00000641947 PPA1Q15181 289 aa15.08■□□□□ 0
PHGDH-232ENST00000641947 ZNF57Q68EA5 555 aaPredicted RBP15.08■□□□□ 0
PHGDH-232ENST00000641947 RND1Q92730 232 aa15.08■□□□□ 0
PHGDH-232ENST00000641947 MARS2Q96GW9 593 aaKnown RBP15.08■□□□□ 0
PHGDH-232ENST00000641947 RNF170Q96K19 258 aa15.08■□□□□ 0
PHGDH-232ENST00000641947 ZMAT3Q9HA38 289 aaKnown RBP15.08■□□□□ 0
PHGDH-232ENST00000641947 KLK11Q9UBX7 282 aa15.08■□□□□ 0
PHGDH-232ENST00000641947 OSGIN2Q9Y236 505 aa15.08■□□□□ 0
PHGDH-232ENST00000641947 RBMX2Q9Y388 322 aaKnown RBP15.08■□□□□ 0
PHGDH-232ENST00000641947 PQLC2LA1A4F0 135 aa15.07■□□□□ 0
PHGDH-232ENST00000641947 CRTAPO75718 401 aaPredicted RBP15.07■□□□□ 0
PHGDH-232ENST00000641947 UBBP0CG47 229 aa15.07■□□□□ 0
PHGDH-232ENST00000641947 GDNFP39905 211 aa15.07■□□□□ 0
PHGDH-232ENST00000641947 VEGFCP49767 419 aa15.07■□□□□ 0
PHGDH-232ENST00000641947 NAAAQ02083 359 aa15.07■□□□□ 0
PHGDH-232ENST00000641947 CCBE1Q6UXH8 406 aaPredicted RBP15.07■□□□□ 0
PHGDH-232ENST00000641947 GLCCI1Q86VQ1 547 aa15.07■□□□□ 0
PHGDH-232ENST00000641947 ZDHHC23Q8IYP9 409 aa15.07■□□□□ 0
PHGDH-232ENST00000641947 ITPKCQ96DU7 683 aa15.07■□□□□ 0
PHGDH-232ENST00000641947 TECTBQ96PL2 329 aa15.07■□□□□ 0
PHGDH-232ENST00000641947 SLC7A11Q9UPY5 501 aa15.07■□□□□ 0
PHGDH-232ENST00000641947 M0R1B8 84 aa15.06■□□□□ 0
PHGDH-232ENST00000641947 LYRM1O43325 122 aa15.06■□□□□ 0
PHGDH-232ENST00000641947 SERPINA2P20848 420 aa15.06■□□□□ 0
PHGDH-232ENST00000641947 PSG7Q13046 419 aa15.06■□□□□ 0
PHGDH-232ENST00000641947 KLF9Q13886 244 aaPredicted RBP15.06■□□□□ 0
PHGDH-232ENST00000641947 STEAP2Q8NFT2 490 aa15.06■□□□□ 0
PHGDH-232ENST00000641947 KCNG3Q8TAE7 436 aa15.06■□□□□ 0
PHGDH-232ENST00000641947 KLF14Q8TD94 323 aaPredicted RBP15.06■□□□□ 0
PHGDH-232ENST00000641947 TMEM59Q9BXS4 323 aa15.06■□□□□ 0
PHGDH-232ENST00000641947 TPPPO94811 219 aa15.06■□□□□ 0
PHGDH-232ENST00000641947 TMEM225BP0DP42 221 aa15.06■□□□□ 0
PHGDH-232ENST00000641947 MGMTP16455 207 aa15.06■□□□□ 0
PHGDH-232ENST00000641947 CA6P23280 308 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms