RNA–Protein interactions for RNA: ENST00000640482.1

VEGFA-230, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-230ENST00000640482 TBX15Q96SF7 602 aa20.86■□□□□ 0.93
VEGFA-230ENST00000640482 CIB1Q99828 191 aa20.86■□□□□ 0.93
VEGFA-230ENST00000640482 FGF23Q9GZV9 251 aaPredicted RBP20.86■□□□□ 0.93
VEGFA-230ENST00000640482 DNTTIP1Q9H147 329 aa20.86■□□□□ 0.93
VEGFA-230ENST00000640482 ADGRL4Q9HBW9 690 aa20.86■□□□□ 0.93
VEGFA-230ENST00000640482 GPR84Q9NQS5 396 aa20.86■□□□□ 0.93
VEGFA-230ENST00000640482 CLN6Q9NWW5 311 aa20.86■□□□□ 0.93
VEGFA-230ENST00000640482 RPUSD1Q9UJJ7 312 aaKnown RBP20.86■□□□□ 0.93
VEGFA-230ENST00000640482 NKX6-3A6NJ46 265 aa20.85■□□□□ 0.93
VEGFA-230ENST00000640482 MTRF1O75570 445 aaKnown RBP20.85■□□□□ 0.93
VEGFA-230ENST00000640482 IGLV3-1P01715 115 aa20.85■□□□□ 0.93
VEGFA-230ENST00000640482 ARF6P62330 175 aa20.85■□□□□ 0.93
VEGFA-230ENST00000640482 EGR3Q06889 387 aa20.85■□□□□ 0.93
VEGFA-230ENST00000640482 DEFB112Q30KQ8 113 aa20.85■□□□□ 0.93
VEGFA-230ENST00000640482 LRRC10Q5BKY1 277 aa20.85■□□□□ 0.93
VEGFA-230ENST00000640482 ATPAF1Q5TC12 328 aaPredicted RBP20.85■□□□□ 0.93
VEGFA-230ENST00000640482 FAM216BQ8N7L0 139 aa20.85■□□□□ 0.93
VEGFA-230ENST00000640482 CENPNQ96H22 339 aaPredicted RBP20.85■□□□□ 0.93
VEGFA-230ENST00000640482 SIRPDQ9H106 197 aa20.85■□□□□ 0.93
VEGFA-230ENST00000640482 SEMA6AQ9H2E6 1030 aa20.85■□□□□ 0.93
VEGFA-230ENST00000640482 CNTD2Q9H8S5 307 aa20.85■□□□□ 0.93
VEGFA-230ENST00000640482 GTF2A1LQ9UNN4 478 aa20.85■□□□□ 0.93
VEGFA-230ENST00000640482 MDFIC2A0A1B0GVS7 189 aa20.84■□□□□ 0.93
VEGFA-230ENST00000640482 A0A1B0GW55 424 aa20.84■□□□□ 0.93
VEGFA-230ENST00000640482 ZNF732B4DXR9 585 aa20.84■□□□□ 0.93
VEGFA-230ENST00000640482 LOC110117498-PIK3R3F6TDL0 507 aa20.84■□□□□ 0.93
VEGFA-230ENST00000640482 AKR7A2O43488 359 aa20.84■□□□□ 0.93
VEGFA-230ENST00000640482 DUX4L2P0CJ85 424 aa20.84■□□□□ 0.93
VEGFA-230ENST00000640482 DUX4L3P0CJ86 424 aa20.84■□□□□ 0.93
VEGFA-230ENST00000640482 DUX4L4P0CJ87 422 aa20.84■□□□□ 0.93
VEGFA-230ENST00000640482 DUX4L5P0CJ88 424 aa20.84■□□□□ 0.93
VEGFA-230ENST00000640482 DUX4L6P0CJ89 424 aa20.84■□□□□ 0.93
VEGFA-230ENST00000640482 DUX4L7P0CJ90 424 aa20.84■□□□□ 0.93
VEGFA-230ENST00000640482 ELF3P78545 371 aaPredicted RBP20.84■□□□□ 0.93
VEGFA-230ENST00000640482 MFGE8Q08431 387 aaPredicted RBP20.84■□□□□ 0.93
VEGFA-230ENST00000640482 IKZF1Q13422 519 aa20.84■□□□□ 0.93
VEGFA-230ENST00000640482 CEP78Q5JTW2 689 aa20.84■□□□□ 0.93
VEGFA-230ENST00000640482 DUX4L9Q6RFH8 374 aaPredicted RBP20.84■□□□□ 0.93
VEGFA-230ENST00000640482 OR5A2Q8NGI9 324 aa20.84■□□□□ 0.93
VEGFA-230ENST00000640482 GATAD2BQ8WXI9 593 aa20.84■□□□□ 0.93
VEGFA-230ENST00000640482 APOL4Q9BPW4 351 aa20.84■□□□□ 0.93
VEGFA-230ENST00000640482 WDR13Q9H1Z4 485 aa20.84■□□□□ 0.93
VEGFA-230ENST00000640482 PRDM13Q9H4Q3 707 aa20.84■□□□□ 0.93
VEGFA-230ENST00000640482 SNTG1Q9NSN8 517 aa20.84■□□□□ 0.93
VEGFA-230ENST00000640482 DUX4Q9UBX2 424 aa20.84■□□□□ 0.93
VEGFA-230ENST00000640482 WARS2Q9UGM6 360 aaKnown RBP20.84■□□□□ 0.93
VEGFA-230ENST00000640482 ENPP5Q9UJA9 477 aa20.84■□□□□ 0.93
VEGFA-230ENST00000640482 OAZ3Q9UMX2 235 aa20.84■□□□□ 0.93
VEGFA-230ENST00000640482 PIGLQ9Y2B2 252 aa20.84■□□□□ 0.93
VEGFA-230ENST00000640482 KPTNQ9Y664 436 aa20.84■□□□□ 0.93
VEGFA-230ENST00000640482 R4GMQ9 66 aa20.84■□□□□ 0.93
VEGFA-230ENST00000640482 CENPVL3A0A0U1RRI6 287 aa20.83■□□□□ 0.93
VEGFA-230ENST00000640482 OR5B21A6NL26 309 aa20.83■□□□□ 0.93
VEGFA-230ENST00000640482 DHRS3O75911 302 aa20.83■□□□□ 0.93
VEGFA-230ENST00000640482 TGM4P49221 684 aa20.83■□□□□ 0.93
VEGFA-230ENST00000640482 BCL2L15Q5TBC7 163 aa20.83■□□□□ 0.93
VEGFA-230ENST00000640482 PLCXD3Q63HM9 321 aa20.83■□□□□ 0.93
VEGFA-230ENST00000640482 RUSC1-AS1Q66K80 236 aa20.83■□□□□ 0.93
VEGFA-230ENST00000640482 MOB3CQ70IA8 216 aa20.83■□□□□ 0.93
VEGFA-230ENST00000640482 OR5T2Q8NGG2 359 aa20.83■□□□□ 0.93
VEGFA-230ENST00000640482 OR51G2Q8NGK0 314 aa20.83■□□□□ 0.93
VEGFA-230ENST00000640482 DMRTB1Q96MA1 342 aa20.83■□□□□ 0.93
VEGFA-230ENST00000640482 GABARAPL3Q9BY60 117 aa20.83■□□□□ 0.93
VEGFA-230ENST00000640482 OR51I2Q9H344 312 aa20.83■□□□□ 0.93
VEGFA-230ENST00000640482 NOX4Q9NPH5 578 aa20.83■□□□□ 0.93
VEGFA-230ENST00000640482 SRSF10O75494 262 aaKnown RBP20.82■□□□□ 0.92
VEGFA-230ENST00000640482 TTRP02766 147 aa20.82■□□□□ 0.92
VEGFA-230ENST00000640482 FAHP16930 419 aa20.82■□□□□ 0.92
VEGFA-230ENST00000640482 GLRA1P23415 457 aa20.82■□□□□ 0.92
VEGFA-230ENST00000640482 CDONQ4KMG0 1287 aa20.82■□□□□ 0.92
VEGFA-230ENST00000640482 FGFRL1Q8N441 504 aa20.82■□□□□ 0.92
VEGFA-230ENST00000640482 LY6G5BQ8NDX9 201 aa20.82■□□□□ 0.92
VEGFA-230ENST00000640482 ZNF671Q8TAW3 534 aa20.82■□□□□ 0.92
VEGFA-230ENST00000640482 LHX4Q969G2 390 aa20.82■□□□□ 0.92
VEGFA-230ENST00000640482 PPP1R14AQ96A00 147 aa20.82■□□□□ 0.92
VEGFA-230ENST00000640482 MED30Q96HR3 178 aa20.82■□□□□ 0.92
VEGFA-230ENST00000640482 OSBPL10Q9BXB5 764 aa20.82■□□□□ 0.92
VEGFA-230ENST00000640482 RIBC2Q9H4K1 309 aa20.82■□□□□ 0.92
VEGFA-230ENST00000640482 NLKQ9UBE8 527 aa20.82■□□□□ 0.92
VEGFA-230ENST00000640482 OR52A1Q9UKL2 312 aa20.82■□□□□ 0.92
VEGFA-230ENST00000640482 SNX5Q9Y5X3 404 aa20.82■□□□□ 0.92
VEGFA-230ENST00000640482 HOXA3O43365 443 aaPredicted RBP20.81■□□□□ 0.92
VEGFA-230ENST00000640482 IL13RA1P78552 427 aa20.81■□□□□ 0.92
VEGFA-230ENST00000640482 ZNF788Q6ZQV5 615 aa20.81■□□□□ 0.92
VEGFA-230ENST00000640482 ELMOD2Q8IZ81 293 aa20.81■□□□□ 0.92
VEGFA-230ENST00000640482 CMTM4Q8IZR5 234 aa20.81■□□□□ 0.92
VEGFA-230ENST00000640482 ANGPTL6Q8NI99 470 aa20.81■□□□□ 0.92
VEGFA-230ENST00000640482 RBM4BQ9BQ04 359 aaKnown RBP20.81■□□□□ 0.92
VEGFA-230ENST00000640482 ONECUT1Q9UBC0 465 aa20.81■□□□□ 0.92
VEGFA-230ENST00000640482 MRM2Q9UI43 246 aaKnown RBP20.81■□□□□ 0.92
VEGFA-230ENST00000640482 IGHV1-69DA0A0B4J2H0 117 aa20.8■□□□□ 0.92
VEGFA-230ENST00000640482 A0A1B0GVI7 797 aa20.8■□□□□ 0.92
VEGFA-230ENST00000640482 SAC3D1A6NKF1 404 aa20.8■□□□□ 0.92
VEGFA-230ENST00000640482 MAGEB4O15481 346 aaPredicted RBP20.8■□□□□ 0.92
VEGFA-230ENST00000640482 RHBDL1O75783 438 aa20.8■□□□□ 0.92
VEGFA-230ENST00000640482 NRASP01111 189 aa20.8■□□□□ 0.92
VEGFA-230ENST00000640482 IGHV1-69P01742 117 aa20.8■□□□□ 0.92
VEGFA-230ENST00000640482 KRT8P05787 483 aa20.8■□□□□ 0.92
VEGFA-230ENST00000640482 AMY2BP19961 511 aa20.8■□□□□ 0.92
VEGFA-230ENST00000640482 HTR1FP30939 366 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms