RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 DRAM2Q6UX65 266 aa8.65□□□□□ -1.02
PTP4A1-207ENST00000639568 THAP5Q7Z6K1 395 aa8.65□□□□□ -1.02
PTP4A1-207ENST00000639568 ADCK1Q86TW2 530 aa8.65□□□□□ -1.02
PTP4A1-207ENST00000639568 ZNF429Q86V71 674 aa8.65□□□□□ -1.02
PTP4A1-207ENST00000639568 SDSLQ96GA7 329 aa8.65□□□□□ -1.02
PTP4A1-207ENST00000639568 NOL4LQ96MY1 436 aaPredicted RBP8.65□□□□□ -1.02
PTP4A1-207ENST00000639568 IKZF5Q9H5V7 419 aa8.65□□□□□ -1.02
PTP4A1-207ENST00000639568 GMEB1Q9Y692 573 aa8.65□□□□□ -1.02
PTP4A1-207ENST00000639568 HECTD4Q9Y4D8 3996 aa8.64□□□□□ -1.03
PTP4A1-207ENST00000639568 TRIM64CA6NLI5 447 aa8.64□□□□□ -1.03
PTP4A1-207ENST00000639568 C17orf98A8MV24 154 aa8.64□□□□□ -1.03
PTP4A1-207ENST00000639568 SOCS2O14508 198 aa8.64□□□□□ -1.03
PTP4A1-207ENST00000639568 SLC22A2O15244 555 aa8.64□□□□□ -1.03
PTP4A1-207ENST00000639568 XRCC2O43543 280 aa8.64□□□□□ -1.03
PTP4A1-207ENST00000639568 DNAJC8O75937 253 aaPredicted RBP8.64□□□□□ -1.03
PTP4A1-207ENST00000639568 HLA-DQA2P01906 255 aa8.64□□□□□ -1.03
PTP4A1-207ENST00000639568 PIPP12273 146 aaPredicted RBP8.64□□□□□ -1.03
PTP4A1-207ENST00000639568 GP9P14770 177 aa8.64□□□□□ -1.03
PTP4A1-207ENST00000639568 HTR1DP28221 377 aa8.64□□□□□ -1.03
PTP4A1-207ENST00000639568 CBX1P83916 185 aa8.64□□□□□ -1.03
PTP4A1-207ENST00000639568 ST3GAL3Q11203 375 aa8.64□□□□□ -1.03
PTP4A1-207ENST00000639568 SRSF7Q16629 238 aaKnown RBP eCLIP8.64□□□□□ -1.031e-7■□□□□ 8.3
PTP4A1-207ENST00000639568 TEX38Q6PEX7 206 aa8.64□□□□□ -1.03
PTP4A1-207ENST00000639568 FAM122BQ7Z309 247 aa8.64□□□□□ -1.03
PTP4A1-207ENST00000639568 NRMQ8IXM6 262 aa8.64□□□□□ -1.03
PTP4A1-207ENST00000639568 FTMTQ8N4E7 242 aa8.64□□□□□ -1.03
PTP4A1-207ENST00000639568 OR4C15Q8NGM1 316 aa8.64□□□□□ -1.03
PTP4A1-207ENST00000639568 TAMM41Q96BW9 452 aa8.64□□□□□ -1.03
PTP4A1-207ENST00000639568 TSSK2Q96PF2 358 aa8.64□□□□□ -1.03
PTP4A1-207ENST00000639568 PAPOLBQ9NRJ5 636 aaKnown RBP8.64□□□□□ -1.03
PTP4A1-207ENST00000639568 TBC1D23Q9NUY8 699 aa8.64□□□□□ -1.03
PTP4A1-207ENST00000639568 PYCARDQ9ULZ3 195 aa8.64□□□□□ -1.03
PTP4A1-207ENST00000639568 TMEM210A6NLX4 147 aa8.63□□□□□ -1.03
PTP4A1-207ENST00000639568 IMPA2O14732 288 aa8.63□□□□□ -1.03
PTP4A1-207ENST00000639568 TBX1O43435 398 aa8.63□□□□□ -1.03
PTP4A1-207ENST00000639568 RBP4P02753 201 aa8.63□□□□□ -1.03
PTP4A1-207ENST00000639568 IGHV4-30-4P0DP06 118 aa8.63□□□□□ -1.03
PTP4A1-207ENST00000639568 TROVE2P10155 538 aaKnown RBP eCLIP8.63□□□□□ -1.03
PTP4A1-207ENST00000639568 KITP10721 976 aa8.63□□□□□ -1.03
PTP4A1-207ENST00000639568 SPNP16150 400 aa8.63□□□□□ -1.03
PTP4A1-207ENST00000639568 TNFRSF1BP20333 461 aa8.63□□□□□ -1.03
PTP4A1-207ENST00000639568 POU3F4P49335 361 aa8.63□□□□□ -1.03
PTP4A1-207ENST00000639568 STX1BP61266 288 aa8.63□□□□□ -1.03
PTP4A1-207ENST00000639568 ACTA2P62736 377 aa8.63□□□□□ -1.03
PTP4A1-207ENST00000639568 ACTG2P63267 376 aa8.63□□□□□ -1.03
PTP4A1-207ENST00000639568 ACTC1P68032 377 aa8.63□□□□□ -1.03
PTP4A1-207ENST00000639568 ACTA1P68133 377 aa8.63□□□□□ -1.03
PTP4A1-207ENST00000639568 FHL1Q13642 323 aa8.63□□□□□ -1.03
PTP4A1-207ENST00000639568 TAF13Q15543 124 aa8.63□□□□□ -1.03
PTP4A1-207ENST00000639568 SNCBQ16143 134 aa8.63□□□□□ -1.03
PTP4A1-207ENST00000639568 ZBED5Q49AG3 693 aa8.63□□□□□ -1.03
PTP4A1-207ENST00000639568 CXorf66Q5JRM2 361 aaPredicted RBP8.63□□□□□ -1.03
PTP4A1-207ENST00000639568 NANOGP8Q6NSW7 305 aa8.63□□□□□ -1.03
PTP4A1-207ENST00000639568 SLC16A9Q7RTY1 509 aa8.63□□□□□ -1.03
PTP4A1-207ENST00000639568 ZNF561Q8N587 486 aa8.63□□□□□ -1.03
PTP4A1-207ENST00000639568 FAM156AQ8NDB6 213 aa8.63□□□□□ -1.03
PTP4A1-207ENST00000639568 ST6GALNAC6Q969X2 333 aa8.63□□□□□ -1.03
PTP4A1-207ENST00000639568 SP140LQ9H930 580 aa8.63□□□□□ -1.03
PTP4A1-207ENST00000639568 SRA1Q9HD15 236 aaKnown RBP8.63□□□□□ -1.03
PTP4A1-207ENST00000639568 PNRC2Q9NPJ4 139 aaKnown RBP8.63□□□□□ -1.03
PTP4A1-207ENST00000639568 CYB5R1Q9UHQ9 305 aa8.63□□□□□ -1.03
PTP4A1-207ENST00000639568 LINC00527Q9UJ94 153 aa8.63□□□□□ -1.03
PTP4A1-207ENST00000639568 KCNG2Q9UJ96 466 aa8.63□□□□□ -1.03
PTP4A1-207ENST00000639568 ZNF222Q9UK12 451 aa8.63□□□□□ -1.03
PTP4A1-207ENST00000639568 BAG5Q9UL15 447 aa8.63□□□□□ -1.03
PTP4A1-207ENST00000639568 RHBDD3Q9Y3P4 386 aa8.63□□□□□ -1.03
PTP4A1-207ENST00000639568 TYROBPO43914 113 aa8.62□□□□□ -1.03
PTP4A1-207ENST00000639568 RPLP1P05386 114 aaKnown RBP8.62□□□□□ -1.03
PTP4A1-207ENST00000639568 ZNF728P0DKX0 622 aa8.62□□□□□ -1.03
PTP4A1-207ENST00000639568 SLC2A1P11166 492 aa8.62□□□□□ -1.03
PTP4A1-207ENST00000639568 OR1E2P47887 323 aa8.62□□□□□ -1.03
PTP4A1-207ENST00000639568 CDX1P47902 265 aaPredicted RBP8.62□□□□□ -1.03
PTP4A1-207ENST00000639568 PRKXP51817 358 aa8.62□□□□□ -1.03
PTP4A1-207ENST00000639568 FAM3AP98173 230 aa8.62□□□□□ -1.03
PTP4A1-207ENST00000639568 PRKCDQ05655 676 aa8.62□□□□□ -1.03
PTP4A1-207ENST00000639568 NFYCQ13952 458 aa8.62□□□□□ -1.03
PTP4A1-207ENST00000639568 TIGD6Q17RP2 521 aa8.62□□□□□ -1.03
PTP4A1-207ENST00000639568 C4orf48Q5BLP8 95 aa8.62□□□□□ -1.03
PTP4A1-207ENST00000639568 PAGE3Q5JUK9 113 aa8.62□□□□□ -1.03
PTP4A1-207ENST00000639568 ZBTB49Q6ZSB9 765 aa8.62□□□□□ -1.03
PTP4A1-207ENST00000639568 EGFL6Q8IUX8 553 aa8.62□□□□□ -1.03
PTP4A1-207ENST00000639568 FOXRED2Q8IWF2 684 aa8.62□□□□□ -1.03
PTP4A1-207ENST00000639568 DRAM1Q8N682 238 aa8.62□□□□□ -1.03
PTP4A1-207ENST00000639568 ZNF511Q8NB15 262 aa8.62□□□□□ -1.03
PTP4A1-207ENST00000639568 SPSB4Q96A44 273 aa8.62□□□□□ -1.03
PTP4A1-207ENST00000639568 RNF170Q96K19 258 aa8.62□□□□□ -1.03
PTP4A1-207ENST00000639568 COPS4Q9BT78 406 aa8.62□□□□□ -1.03
PTP4A1-207ENST00000639568 PPP1R3EQ9H7J1 279 aa8.62□□□□□ -1.03
PTP4A1-207ENST00000639568 ISYNA1Q9NPH2 558 aa8.62□□□□□ -1.03
PTP4A1-207ENST00000639568 TRBV5-3A0A0A0MS03 114 aa8.61□□□□□ -1.03
PTP4A1-207ENST00000639568 IGHV2-26A0A0B4J1V2 119 aa8.61□□□□□ -1.03
PTP4A1-207ENST00000639568 RFPL4AA6NLU0 287 aa8.61□□□□□ -1.03
PTP4A1-207ENST00000639568 RFPL4AL1F8VTS6 287 aa8.61□□□□□ -1.03
PTP4A1-207ENST00000639568 DCTN6O00399 190 aa8.61□□□□□ -1.03
PTP4A1-207ENST00000639568 CCRL2O00421 344 aa8.61□□□□□ -1.03
PTP4A1-207ENST00000639568 SAP30O75446 220 aa8.61□□□□□ -1.03
PTP4A1-207ENST00000639568 FAM106CPP0CH98 169 aa8.61□□□□□ -1.03
PTP4A1-207ENST00000639568 ANOS1P23352 680 aa8.61□□□□□ -1.03
PTP4A1-207ENST00000639568 CFL1P23528 166 aaKnown RBP8.61□□□□□ -1.03
PTP4A1-207ENST00000639568 PRDX2P32119 198 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms