RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 ATP1B3P54709 279 aa13.18□□□□□ -0.3
CLN6-219ENST00000637329 QRFPP83859 136 aa13.18□□□□□ -0.3
CLN6-219ENST00000637329 ADORA2A-AS1P86434 159 aa13.18□□□□□ -0.3
CLN6-219ENST00000637329 SORDQ00796 357 aa13.18□□□□□ -0.3
CLN6-219ENST00000637329 PRDX4Q13162 271 aa13.18□□□□□ -0.3
CLN6-219ENST00000637329 CEACAM21Q3KPI0 293 aa13.18□□□□□ -0.3
CLN6-219ENST00000637329 TMEM69Q5SWH9 247 aa13.18□□□□□ -0.3
CLN6-219ENST00000637329 MBNL2Q5VZF2 373 aaKnown RBP13.18□□□□□ -0.3
CLN6-219ENST00000637329 CRIP3Q6Q6R5 217 aa13.18□□□□□ -0.3
CLN6-219ENST00000637329 TMEM108Q6UXF1 575 aa13.18□□□□□ -0.3
CLN6-219ENST00000637329 CDH24Q86UP0 819 aa13.18□□□□□ -0.3
CLN6-219ENST00000637329 KCNG3Q8TAE7 436 aa13.18□□□□□ -0.3
CLN6-219ENST00000637329 SLC25A40Q8TBP6 338 aa13.18□□□□□ -0.3
CLN6-219ENST00000637329 NPRL2Q8WTW4 380 aa13.18□□□□□ -0.3
CLN6-219ENST00000637329 PIGCQ92535 297 aa13.18□□□□□ -0.3
CLN6-219ENST00000637329 MARS2Q96GW9 593 aaKnown RBP13.18□□□□□ -0.3
CLN6-219ENST00000637329 NUDT16L1Q9BRJ7 211 aaKnown RBP13.18□□□□□ -0.3
CLN6-219ENST00000637329 OR2J1Q9GZK6 312 aa13.18□□□□□ -0.3
CLN6-219ENST00000637329 CST11Q9H112 138 aa13.18□□□□□ -0.3
CLN6-219ENST00000637329 OR51B6Q9H340 312 aa13.18□□□□□ -0.3
CLN6-219ENST00000637329 RAB22AQ9UL26 194 aa13.18□□□□□ -0.3
CLN6-219ENST00000637329 A0A0G2JMP0 313 aa13.17□□□□□ -0.3
CLN6-219ENST00000637329 A0A0X1KG70 313 aa13.17□□□□□ -0.3
CLN6-219ENST00000637329 OR5B21A6NL26 309 aa13.17□□□□□ -0.3
CLN6-219ENST00000637329 ZNF850A8MQ14 1090 aa13.17□□□□□ -0.3
CLN6-219ENST00000637329 TMEM14DPA8MWL7 114 aa13.17□□□□□ -0.3
CLN6-219ENST00000637329 XRCC3O43542 346 aa13.17□□□□□ -0.3
CLN6-219ENST00000637329 CTAG2O75638 210 aa13.17□□□□□ -0.3
CLN6-219ENST00000637329 IL7P13232 177 aa13.17□□□□□ -0.3
CLN6-219ENST00000637329 KITLGP21583 273 aa13.17□□□□□ -0.3
CLN6-219ENST00000637329 CDK2P24941 298 aa13.17□□□□□ -0.3
CLN6-219ENST00000637329 PTAFRP25105 342 aa13.17□□□□□ -0.3
CLN6-219ENST00000637329 MMP15P51511 669 aa13.17□□□□□ -0.3
CLN6-219ENST00000637329 MTCP1P56278 107 aa13.17□□□□□ -0.3
CLN6-219ENST00000637329 PRSS12P56730 875 aa13.17□□□□□ -0.3
CLN6-219ENST00000637329 DEFA1P59665 94 aa13.17□□□□□ -0.3
CLN6-219ENST00000637329 DEFA3P59666 94 aa13.17□□□□□ -0.3
CLN6-219ENST00000637329 ZP1P60852 638 aa13.17□□□□□ -0.3
CLN6-219ENST00000637329 SPATA46Q5T0L3 261 aa13.17□□□□□ -0.3
CLN6-219ENST00000637329 HACD4Q5VWC8 232 aa13.17□□□□□ -0.3
CLN6-219ENST00000637329 RAB12Q6IQ22 244 aa13.17□□□□□ -0.3
CLN6-219ENST00000637329 GLIPR1L1Q6UWM5 242 aa13.17□□□□□ -0.3
CLN6-219ENST00000637329 MOB3CQ70IA8 216 aa13.17□□□□□ -0.3
CLN6-219ENST00000637329 ANGPTL5Q86XS5 388 aa13.17□□□□□ -0.3
CLN6-219ENST00000637329 LYSMD2Q8IV50 215 aa13.17□□□□□ -0.3
CLN6-219ENST00000637329 Q8N402 240 aa13.17□□□□□ -0.3
CLN6-219ENST00000637329 OR4M2Q8NGB6 313 aa13.17□□□□□ -0.3
CLN6-219ENST00000637329 OR5A2Q8NGI9 324 aa13.17□□□□□ -0.3
CLN6-219ENST00000637329 LILRB4Q8NHJ6 448 aa13.17□□□□□ -0.3
CLN6-219ENST00000637329 SETD6Q8TBK2 473 aa13.17□□□□□ -0.3
CLN6-219ENST00000637329 KLF14Q8TD94 323 aaPredicted RBP13.17□□□□□ -0.3
CLN6-219ENST00000637329 TNFAIP8L1Q8WVP5 186 aa13.17□□□□□ -0.3
CLN6-219ENST00000637329 RNASE6Q93091 150 aaKnown RBP13.17□□□□□ -0.3
CLN6-219ENST00000637329 PHF21AQ96BD5 680 aa13.17□□□□□ -0.3
CLN6-219ENST00000637329 CMBLQ96DG6 245 aa13.17□□□□□ -0.3
CLN6-219ENST00000637329 ITPKCQ96DU7 683 aa13.17□□□□□ -0.3
CLN6-219ENST00000637329 CCDC120Q96HB5 630 aa13.17□□□□□ -0.3
CLN6-219ENST00000637329 C1orf147Q96MC9 270 aaPredicted RBP13.17□□□□□ -0.3
CLN6-219ENST00000637329 PSMG3-AS1Q96PY0 264 aa13.17□□□□□ -0.3
CLN6-219ENST00000637329 SPACA5Q96QH8 159 aa13.17□□□□□ -0.3
CLN6-219ENST00000637329 S100A13Q99584 98 aa13.17□□□□□ -0.3
CLN6-219ENST00000637329 NGBQ9NPG2 151 aa13.17□□□□□ -0.3
CLN6-219ENST00000637329 DIABLOQ9NR28 239 aa13.17□□□□□ -0.3
CLN6-219ENST00000637329 ABCB10Q9NRK6 738 aa13.17□□□□□ -0.3
CLN6-219ENST00000637329 GPR160Q9UJ42 338 aa13.17□□□□□ -0.3
CLN6-219ENST00000637329 PQLC2LA1A4F0 135 aa13.16□□□□□ -0.3
CLN6-219ENST00000637329 METTL21EPA6NDL7 271 aa13.16□□□□□ -0.3
CLN6-219ENST00000637329 GSTZ1O43708 216 aaPredicted RBP13.16□□□□□ -0.3
CLN6-219ENST00000637329 ZNF780AO75290 641 aaPredicted RBP13.16□□□□□ -0.3
CLN6-219ENST00000637329 VSIG8P0DPA2 414 aa13.16□□□□□ -0.3
CLN6-219ENST00000637329 GCH1P30793 250 aa13.16□□□□□ -0.3
CLN6-219ENST00000637329 EFNB2P52799 333 aa13.16□□□□□ -0.3
CLN6-219ENST00000637329 RIPPLY3P57055 190 aa13.16□□□□□ -0.3
CLN6-219ENST00000637329 NKX6-1P78426 367 aaPredicted RBP13.16□□□□□ -0.3
CLN6-219ENST00000637329 UNC119Q13432 240 aa13.16□□□□□ -0.3
CLN6-219ENST00000637329 GPR176Q14439 515 aa13.16□□□□□ -0.3
CLN6-219ENST00000637329 RGS21Q2M5E4 152 aa13.16□□□□□ -0.3
CLN6-219ENST00000637329 ZNF718Q3SXZ3 478 aa13.16□□□□□ -0.3
CLN6-219ENST00000637329 TRIQKQ629K1 86 aa13.16□□□□□ -0.3
CLN6-219ENST00000637329 STEAP3Q658P3 488 aa13.16□□□□□ -0.3
CLN6-219ENST00000637329 FJX1Q86VR8 437 aa13.16□□□□□ -0.3
CLN6-219ENST00000637329 OR8H2Q8N162 312 aa13.16□□□□□ -0.3
CLN6-219ENST00000637329 ZSCAN4Q8NAM6 433 aaPredicted RBP13.16□□□□□ -0.3
CLN6-219ENST00000637329 PXT1Q8NFP0 134 aa13.16□□□□□ -0.3
CLN6-219ENST00000637329 HPSE2Q8WWQ2 592 aa13.16□□□□□ -0.3
CLN6-219ENST00000637329 HIST1H2AAQ96QV6 131 aa13.16□□□□□ -0.3
CLN6-219ENST00000637329 NKX3-1Q99801 234 aaPredicted RBP13.16□□□□□ -0.3
CLN6-219ENST00000637329 SLC22A4Q9H015 551 aa13.16□□□□□ -0.3
CLN6-219ENST00000637329 KCNK15Q9H427 330 aa13.16□□□□□ -0.3
CLN6-219ENST00000637329 IL36GQ9NZH8 169 aa13.16□□□□□ -0.3
CLN6-219ENST00000637329 LRRK2Q5S007 2527 aa13.16□□□□□ -0.3
CLN6-219ENST00000637329 RP1L1Q8IWN7 2480 aaPredicted RBP13.15□□□□□ -0.3
CLN6-219ENST00000637329 FAM230AA0A1W2PPH8 454 aa13.15□□□□□ -0.3
CLN6-219ENST00000637329 CSF3P09919 207 aa13.15□□□□□ -0.3
CLN6-219ENST00000637329 CD40P25942 277 aa13.15□□□□□ -0.3
CLN6-219ENST00000637329 GLRXP35754 106 aa13.15□□□□□ -0.3
CLN6-219ENST00000637329 TAS2R20P59543 309 aa13.15□□□□□ -0.3
CLN6-219ENST00000637329 ERVS71-1P61550 626 aa13.15□□□□□ -0.3
CLN6-219ENST00000637329 IFITM3Q01628 133 aa13.15□□□□□ -0.3
CLN6-219ENST00000637329 SCN1BQ07699 218 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms