RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 IGHV4-34P06331 123 aa5.46□□□□□ -1.53
SCN1A-212ENST00000636194 FURINP09958 794 aa5.46□□□□□ -1.53
SCN1A-212ENST00000636194 FABP4P15090 132 aa5.46□□□□□ -1.53
SCN1A-212ENST00000636194 GP2P55259 537 aaKnown RBP5.46□□□□□ -1.53
SCN1A-212ENST00000636194 RAG2P55895 527 aa5.46□□□□□ -1.53
SCN1A-212ENST00000636194 KCNJ10P78508 379 aa5.46□□□□□ -1.53
SCN1A-212ENST00000636194 ROM1Q03395 351 aa5.46□□□□□ -1.53
SCN1A-212ENST00000636194 TOMM34Q15785 309 aaPredicted RBP5.46□□□□□ -1.53
SCN1A-212ENST00000636194 IL17AQ16552 155 aa5.46□□□□□ -1.53
SCN1A-212ENST00000636194 OR2Z1Q8NG97 314 aa5.46□□□□□ -1.53
SCN1A-212ENST00000636194 OR1B1Q8NGR6 318 aa5.46□□□□□ -1.53
SCN1A-212ENST00000636194 PTX4Q96A99 478 aa5.46□□□□□ -1.53
SCN1A-212ENST00000636194 VGLL1Q99990 258 aa5.46□□□□□ -1.53
SCN1A-212ENST00000636194 SIRT3Q9NTG7 399 aaPredicted RBP5.46□□□□□ -1.53
SCN1A-212ENST00000636194 BOLA1Q9Y3E2 137 aa5.46□□□□□ -1.53
SCN1A-212ENST00000636194 DOCK5Q9H7D0 1870 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 RPS19P39019 145 aaKnown RBP5.46□□□□□ -1.54
SCN1A-212ENST00000636194 MVDP53602 400 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 PCLAFQ15004 111 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 C10orf128Q5T292 105 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 LYPD4Q6UWN0 246 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 OR52N4Q8NGI2 321 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.46□□□□□ -1.54
SCN1A-212ENST00000636194 SLC25A32Q9H2D1 315 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 TUBA4BQ9H853 241 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 GPR173Q9NS66 373 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 PPIL1Q9Y3C6 166 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 LAMB4A4D0S4 1761 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 GREB1Q4ZG55 1949 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 ELOA3CA0A087WX78 387 aaPredicted RBP5.46□□□□□ -1.54
SCN1A-212ENST00000636194 GNG7O60262 68 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 ALOX12BO75342 701 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 OR4A8P0C604 315 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 PTHLHP12272 177 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 TPMTP51580 245 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 TM4SF20Q53R12 229 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 SPANXN1Q5VSR9 72 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 FAM109BQ6ICB4 259 aaPredicted RBP5.46□□□□□ -1.54
SCN1A-212ENST00000636194 FAHD1Q6P587 224 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 DEFB132Q7Z7B7 95 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 VRK3Q8IV63 474 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 TMEM123Q8N131 208 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 FAM71CQ8NEG0 241 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 RAB24Q969Q5 203 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 MRGPRX2Q96LB1 330 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 LINC00052Q96N35 136 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 TBX15Q96SF7 602 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 CSF3RQ99062 836 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 C19orf53Q9UNZ5 99 aaPredicted RBP5.46□□□□□ -1.54
SCN1A-212ENST00000636194 CSAG2Q9Y5P2 127 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 DNAJC15Q9Y5T4 150 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 A0A0A6YYC8 382 aaPredicted RBP5.46□□□□□ -1.54
SCN1A-212ENST00000636194 A0A1W2PNV4 684 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 RBMY1BA6NDE4 496 aaKnown RBP5.46□□□□□ -1.54
SCN1A-212ENST00000636194 RBMY1EA6NEQ0 496 aaKnown RBP5.46□□□□□ -1.54
SCN1A-212ENST00000636194 I3L1I5 382 aaPredicted RBP5.46□□□□□ -1.54
SCN1A-212ENST00000636194 GPR25O00155 361 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 RBMY1DP0C7P1 496 aaKnown RBP5.46□□□□□ -1.54
SCN1A-212ENST00000636194 RBMY1A1P0DJD3 496 aaKnown RBP5.46□□□□□ -1.54
SCN1A-212ENST00000636194 RBMY1CP0DJD4 496 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 RPS25P62851 125 aaKnown RBP5.46□□□□□ -1.54
SCN1A-212ENST00000636194 TNFRSF17Q02223 184 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 DUSP8Q13202 625 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 ZNF528Q3MIS6 628 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 ALKAL2Q6UX46 152 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 AKR7LQ8NHP1 331 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 FUBP1Q96AE4 644 aaKnown RBP5.46□□□□□ -1.54
SCN1A-212ENST00000636194 CCDC168Q8NDH2 2452 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 hADV38S2A0JD32 116 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 OR8A1Q8NGG7 326 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 DNAJC19Q96DA6 116 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 ELOVL1Q9BW60 279 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 ZNF395Q9H8N7 513 aaPredicted RBP5.46□□□□□ -1.54
SCN1A-212ENST00000636194 MSL2Q9HCI7 577 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 OR51B4Q9Y5P0 310 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 MASP2O00187 686 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 PDGFAP04085 211 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 PTBP1P26599 531 aaKnown RBP eCLIP5.46□□□□□ -1.543e-7■■■■□ 20.5
SCN1A-212ENST00000636194 SNRPNP63162 240 aaKnown RBP5.46□□□□□ -1.54
SCN1A-212ENST00000636194 RGNQ15493 299 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 ANGPTL5Q86XS5 388 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 OR5AP2Q8NGF4 316 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 OR8B3Q8NGG8 313 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 LGALS14Q8TCE9 139 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 L3HYPDHQ96EM0 354 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 OR8B2Q96RD0 313 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 PLA2G12AQ9BZM1 189 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 C20orf27Q9GZN8 174 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 TAAR3PQ9P1P4 343 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 DIP2BQ9P265 1576 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 NALCNQ8IZF0 1738 aa5.46□□□□□ -1.54
SCN1A-212ENST00000636194 CCDC187A0A096LP49 1063 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 TRAV39A0A0B4J263 110 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 LGALS3P17931 250 aaKnown RBP5.45□□□□□ -1.54
SCN1A-212ENST00000636194 TMEM95Q3KNT9 176 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 KHDC3LQ587J8 217 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 C18orf63Q68DL7 685 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 GLIPR1L1Q6UWM5 242 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 SEZ6L2Q6UXD5 910 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 MDP1Q86V88 176 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms