RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 CWH43Q9H720 699 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 RPF2Q9H7B2 306 aaKnown RBP2.44□□□□□ -2.02
PSPC1-208ENST00000635562 NRN1Q9NPD7 142 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 SLC7A10Q9NS82 523 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 DUX4Q9UBX2 424 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 POU2F3Q9UKI9 436 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 C14orf166Q9Y224 244 aaKnown RBP2.44□□□□□ -2.02
PSPC1-208ENST00000635562 ASF1AQ9Y294 204 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 KIAA1210Q9ULL0 1709 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 METP08581 1390 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 PALLDQ8WX93 1383 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 UHRF1BP1LA0JNW5 1464 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 AKAP11Q9UKA4 1901 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 WRNQ14191 1432 aaPredicted RBP eCLIP2.43□□□□□ -2.02
PSPC1-208ENST00000635562 SCAPERQ9BY12 1400 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 XIRP1Q702N8 1843 aaKnown RBP2.43□□□□□ -2.02
PSPC1-208ENST00000635562 SCN5AQ14524 2016 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 TRBV5-5A0A0J9YX44 114 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 OR5B21A6NL26 309 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 USP27XA6NNY8 438 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 IDSB3KWA1 339 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 F5H5K5 113 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 G3V2T6 193 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 TRAPPC2LH3BP13 241 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 GFYI3L273 518 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 K7ERI5 159 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 SLC17A3O00476 420 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 ZNF593O00488 134 aaPredicted RBP2.43□□□□□ -2.02
PSPC1-208ENST00000635562 EI24O14681 340 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 FABP7O15540 132 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 CYB5BO43169 146 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 PPIHO43447 177 aaKnown RBP2.43□□□□□ -2.02
PSPC1-208ENST00000635562 RAD51CO43502 376 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 CHST10O43529 356 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 TPST1O60507 370 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 LYPLA1O75608 230 aaPredicted RBP2.43□□□□□ -2.02
PSPC1-208ENST00000635562 ATG12O94817 140 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 LYPD3O95274 346 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 CLIC3O95833 236 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 SLC25A27O95847 323 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 FAM107AO95990 144 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 OAS1P00973 400 aaKnown RBP2.43□□□□□ -2.02
PSPC1-208ENST00000635562 GCGP01275 180 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 FGF1P05230 155 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 HPNP05981 417 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 ACSM4P0C7M7 580 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 METTL15P1P0C7V9 234 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 CD37P11049 281 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 PAX1P15863 534 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 MUC1P15941 1255 aaPredicted RBP2.43□□□□□ -2.02
PSPC1-208ENST00000635562 SPI1P17947 270 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 SDC1P18827 310 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 MYL12AP19105 171 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 TBPP20226 339 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 COX5AP20674 150 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 S100A7P31151 101 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 PYCR1P32322 319 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 RPA3P35244 121 aaPredicted RBP2.43□□□□□ -2.02
PSPC1-208ENST00000635562 MAP2K4P45985 399 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 GCLMP48507 274 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 GSK3BP49841 420 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 PDX1P52945 283 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 CDH11P55287 796 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 WNT4P56705 351 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 OR1D5P58170 312 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 PFN3P60673 137 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 DYNLL1P63167 89 aaKnown RBP2.43□□□□□ -2.02
PSPC1-208ENST00000635562 RPL36AP83881 106 aaKnown RBP2.43□□□□□ -2.02
PSPC1-208ENST00000635562 POU3F1Q03052 451 aaPredicted RBP2.43□□□□□ -2.02
PSPC1-208ENST00000635562 FMODQ06828 376 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 RIGQ13278 110 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 OR5I1Q13606 314 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 ZNF630Q2M218 657 aaPredicted RBP2.43□□□□□ -2.02
PSPC1-208ENST00000635562 SLC25A35Q3KQZ1 300 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 RNF212Q495C1 297 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 ZBED5Q49AG3 693 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 TRMT12Q53H54 448 aaKnown RBP2.43□□□□□ -2.02
PSPC1-208ENST00000635562 TMEM128Q5BJH2 165 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 ACSBG2Q5FVE4 666 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 FAM27D1Q5T7N8 215 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 TMEM78Q5T7P6 136 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 HBMQ6B0K9 141 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 OR4C11Q6IEV9 310 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 TOMM20LQ6UXN7 152 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 UNQ9370/PRO34162Q6UXP9 181 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 STAC2Q6ZMT1 411 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 C9orf139Q6ZV77 190 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 SLC16A13Q7RTY0 426 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 SMIM29Q86T20 159 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 NFE4Q86UQ8 179 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 PIGZQ86VD9 579 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 RDH10Q8IZV5 341 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 CIARTQ8N365 385 aaPredicted RBP2.43□□□□□ -2.02
PSPC1-208ENST00000635562 SVOPLQ8N434 492 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 SPICQ8N5J4 248 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 RFLNBQ8N5W9 214 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 GVQW1Q8N7I0 195 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 WDSUB1Q8N9V3 476 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 AQP11Q8NBQ7 271 aa2.43□□□□□ -2.02
PSPC1-208ENST00000635562 ST6GALNAC3Q8NDV1 305 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms