RNA–Protein interactions for RNA: ENST00000635325.1

UBASH3A-209, Transcript of ubiquitin associated and SH3 domain containing A, humanhuman

TSL 1 (best)

Gene UBASH3A, Length 2,095 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3A-209ENST00000635325 GPR35Q9HC97 309 aa10.86□□□□□ -0.67
UBASH3A-209ENST00000635325 UBQLN2Q9UHD9 624 aa10.86□□□□□ -0.67
UBASH3A-209ENST00000635325 RIF1Q5UIP0 2472 aaKnown RBP10.86□□□□□ -0.67
UBASH3A-209ENST00000635325 ASPMQ8IZT6 3477 aa10.85□□□□□ -0.67
UBASH3A-209ENST00000635325 EP300Q09472 2414 aaPredicted RBP10.85□□□□□ -0.67
UBASH3A-209ENST00000635325 TRAV14DV4A0A0A6YYC5 116 aa10.85□□□□□ -0.67
UBASH3A-209ENST00000635325 LINC00862A6NCI5 91 aa10.85□□□□□ -0.67
UBASH3A-209ENST00000635325 HMSDA8MTL9 139 aa10.85□□□□□ -0.67
UBASH3A-209ENST00000635325 C21orf140B9A014 251 aa10.85□□□□□ -0.67
UBASH3A-209ENST00000635325 CCSO14618 274 aa10.85□□□□□ -0.67
UBASH3A-209ENST00000635325 IFNA6P05013 189 aa10.85□□□□□ -0.67
UBASH3A-209ENST00000635325 PPP3CBP16298 524 aa10.85□□□□□ -0.67
UBASH3A-209ENST00000635325 TBPP20226 339 aa10.85□□□□□ -0.67
UBASH3A-209ENST00000635325 CD34P28906 385 aa10.85□□□□□ -0.67
UBASH3A-209ENST00000635325 HTR5AP47898 357 aa10.85□□□□□ -0.67
UBASH3A-209ENST00000635325 OR1C1Q15619 314 aa10.85□□□□□ -0.67
UBASH3A-209ENST00000635325 FAM189A2Q15884 450 aa10.85□□□□□ -0.67
UBASH3A-209ENST00000635325 KRTAP27-1Q3LI81 207 aa10.85□□□□□ -0.67
UBASH3A-209ENST00000635325 TMEM164Q5U3C3 297 aa10.85□□□□□ -0.67
UBASH3A-209ENST00000635325 SULF2Q8IWU5 870 aa10.85□□□□□ -0.67
UBASH3A-209ENST00000635325 SKA3Q8IX90 412 aa10.85□□□□□ -0.67
UBASH3A-209ENST00000635325 SEMA6DQ8NFY4 1073 aa10.85□□□□□ -0.67
UBASH3A-209ENST00000635325 MAFIPQ8WZ33 124 aa10.85□□□□□ -0.67
UBASH3A-209ENST00000635325 ST8SIA4Q92187 359 aa10.85□□□□□ -0.67
UBASH3A-209ENST00000635325 HAS2Q92819 552 aa10.85□□□□□ -0.67
UBASH3A-209ENST00000635325 CPNE4Q96A23 557 aaPredicted RBP10.85□□□□□ -0.67
UBASH3A-209ENST00000635325 WNT5BQ9H1J7 359 aa10.85□□□□□ -0.67
UBASH3A-209ENST00000635325 NOP16Q9Y3C1 178 aaKnown RBP10.85□□□□□ -0.67
UBASH3A-209ENST00000635325 SPAARA0A1B0GVQ0 90 aa10.85□□□□□ -0.67
UBASH3A-209ENST00000635325 LCATP04180 440 aa10.85□□□□□ -0.67
UBASH3A-209ENST00000635325 HPNP05981 417 aa10.85□□□□□ -0.67
UBASH3A-209ENST00000635325 AKR1C4P17516 323 aa10.85□□□□□ -0.67
UBASH3A-209ENST00000635325 LHX2P50458 406 aa10.85□□□□□ -0.67
UBASH3A-209ENST00000635325 SCRN3Q0VDG4 424 aa10.85□□□□□ -0.67
UBASH3A-209ENST00000635325 HLXQ14774 488 aaPredicted RBP10.85□□□□□ -0.67
UBASH3A-209ENST00000635325 ZMYND11Q15326 602 aa10.85□□□□□ -0.67
UBASH3A-209ENST00000635325 JMJD6Q6NYC1 403 aaPredicted RBP10.85□□□□□ -0.67
UBASH3A-209ENST00000635325 TMUB2Q71RG4 321 aa10.85□□□□□ -0.67
UBASH3A-209ENST00000635325 SLC16A14Q7RTX9 510 aa10.85□□□□□ -0.67
UBASH3A-209ENST00000635325 LYG2Q86SG7 212 aa10.85□□□□□ -0.67
UBASH3A-209ENST00000635325 HOGA1Q86XE5 327 aa10.85□□□□□ -0.67
UBASH3A-209ENST00000635325 ZDHHC22Q8N966 263 aa10.85□□□□□ -0.67
UBASH3A-209ENST00000635325 OR5M8Q8NGP6 311 aa10.85□□□□□ -0.67
UBASH3A-209ENST00000635325 ANGPTL6Q8NI99 470 aa10.85□□□□□ -0.67
UBASH3A-209ENST00000635325 MARCH1Q8TCQ1 289 aa10.85□□□□□ -0.67
UBASH3A-209ENST00000635325 OR2H1Q9GZK4 316 aa10.85□□□□□ -0.67
UBASH3A-209ENST00000635325 ELL3Q9HB65 397 aaPredicted RBP10.85□□□□□ -0.67
UBASH3A-209ENST00000635325 MAB21L2Q9Y586 359 aa10.85□□□□□ -0.67
UBASH3A-209ENST00000635325 C9orf170A2RU37 121 aa10.84□□□□□ -0.67
UBASH3A-209ENST00000635325 OR6C65A6NJZ3 312 aa10.84□□□□□ -0.67
UBASH3A-209ENST00000635325 CDK2AP1O14519 115 aa10.84□□□□□ -0.67
UBASH3A-209ENST00000635325 IL2RAP01589 272 aa10.84□□□□□ -0.67
UBASH3A-209ENST00000635325 M6PRP20645 277 aa10.84□□□□□ -0.67
UBASH3A-209ENST00000635325 BLVRBP30043 206 aaPredicted RBP10.84□□□□□ -0.67
UBASH3A-209ENST00000635325 S100A11P31949 105 aa10.84□□□□□ -0.67
UBASH3A-209ENST00000635325 MAGEA5P43359 124 aa10.84□□□□□ -0.67
UBASH3A-209ENST00000635325 CLDN18P56856 261 aa10.84□□□□□ -0.67
UBASH3A-209ENST00000635325 ARFRP1Q13795 201 aa10.84□□□□□ -0.67
UBASH3A-209ENST00000635325 PNLIPRP3Q17RR3 467 aa10.84□□□□□ -0.67
UBASH3A-209ENST00000635325 ESCO2Q56NI9 601 aa10.84□□□□□ -0.67
UBASH3A-209ENST00000635325 CLVS2Q5SYC1 327 aa10.84□□□□□ -0.67
UBASH3A-209ENST00000635325 RIPPLY2Q5TAB7 128 aa10.84□□□□□ -0.67
UBASH3A-209ENST00000635325 TSPO2Q5TGU0 170 aa10.84□□□□□ -0.67
UBASH3A-209ENST00000635325 GALNTL5Q7Z4T8 443 aa10.84□□□□□ -0.67
UBASH3A-209ENST00000635325 SLC51BQ86UW2 128 aa10.84□□□□□ -0.67
UBASH3A-209ENST00000635325 CCDC54Q8NEL0 328 aa10.84□□□□□ -0.67
UBASH3A-209ENST00000635325 OCSTAMPQ9BR26 566 aa10.84□□□□□ -0.67
UBASH3A-209ENST00000635325 ST6GALNAC5Q9BVH7 336 aa10.84□□□□□ -0.67
UBASH3A-209ENST00000635325 SLC6A15Q9H2J7 730 aa10.84□□□□□ -0.67
UBASH3A-209ENST00000635325 GHRLQ9UBU3 117 aa10.84□□□□□ -0.67
UBASH3A-209ENST00000635325 KCNN3Q9UGI6 736 aa10.84□□□□□ -0.67
UBASH3A-209ENST00000635325 TIMM10BQ9Y5J6 103 aa10.84□□□□□ -0.67
UBASH3A-209ENST00000635325 AUP1Q9Y679 476 aa10.84□□□□□ -0.67
UBASH3A-209ENST00000635325 IGKV1-27A0A075B6S5 117 aa10.83□□□□□ -0.68
UBASH3A-209ENST00000635325 EFSO43281 561 aa10.83□□□□□ -0.68
UBASH3A-209ENST00000635325 TNFSF15O95150 251 aa10.83□□□□□ -0.68
UBASH3A-209ENST00000635325 VAMP1P23763 118 aa10.83□□□□□ -0.68
UBASH3A-209ENST00000635325 MTCP1P56278 107 aa10.83□□□□□ -0.68
UBASH3A-209ENST00000635325 IL13RA1P78552 427 aa10.83□□□□□ -0.68
UBASH3A-209ENST00000635325 CLLU1Q5K131 121 aa10.83□□□□□ -0.68
UBASH3A-209ENST00000635325 C3P1Q6ZMU1 363 aa10.83□□□□□ -0.68
UBASH3A-209ENST00000635325 ASCL5Q7RTU5 278 aa10.83□□□□□ -0.68
UBASH3A-209ENST00000635325 CASTOR1Q8WTX7 329 aa10.83□□□□□ -0.68
UBASH3A-209ENST00000635325 MITD1Q8WV92 249 aa10.83□□□□□ -0.68
UBASH3A-209ENST00000635325 C10orf35Q96D05 121 aa10.83□□□□□ -0.68
UBASH3A-209ENST00000635325 SEC22AQ96IW7 307 aa10.83□□□□□ -0.68
UBASH3A-209ENST00000635325 PECRQ9BY49 303 aa10.83□□□□□ -0.68
UBASH3A-209ENST00000635325 TTTY12Q9BZ98 90 aa10.83□□□□□ -0.68
UBASH3A-209ENST00000635325 ARL6Q9H0F7 186 aa10.83□□□□□ -0.68
UBASH3A-209ENST00000635325 ZNF581Q9P0T4 197 aa10.83□□□□□ -0.68
UBASH3A-209ENST00000635325 MED13Q9UHV7 2174 aa10.83□□□□□ -0.68
UBASH3A-209ENST00000635325 FAM230AA0A1W2PPH8 454 aa10.83□□□□□ -0.68
UBASH3A-209ENST00000635325 ZNHIT1O43257 154 aa10.83□□□□□ -0.68
UBASH3A-209ENST00000635325 ANGPTL7O43827 346 aa10.83□□□□□ -0.68
UBASH3A-209ENST00000635325 PLATP00750 562 aa10.83□□□□□ -0.68
UBASH3A-209ENST00000635325 NPY4RP50391 375 aa10.83□□□□□ -0.68
UBASH3A-209ENST00000635325 NHLRC3Q5JS37 347 aa10.83□□□□□ -0.68
UBASH3A-209ENST00000635325 VAX1Q5SQQ9 334 aa10.83□□□□□ -0.68
UBASH3A-209ENST00000635325 TERB2Q8NHR7 220 aa10.83□□□□□ -0.68
UBASH3A-209ENST00000635325 S100A13Q99584 98 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms