RNA–Protein interactions for RNA: ENST00000633627.1

CROCCP4-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

TSL 3 BASIC

Gene CROCCP4, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-202ENST00000633627 GPR173Q9NS66 373 aa16.33■□□□□ 0.2
CROCCP4-202ENST00000633627 BLOC1S6Q9UL45 172 aa16.33■□□□□ 0.2
CROCCP4-202ENST00000633627 NPTNQ9Y639 398 aa16.33■□□□□ 0.2
CROCCP4-202ENST00000633627 OR5B21A6NL26 309 aa16.32■□□□□ 0.2
CROCCP4-202ENST00000633627 TMEM210A6NLX4 147 aa16.32■□□□□ 0.2
CROCCP4-202ENST00000633627 SMAD7O15105 426 aaKnown RBP16.32■□□□□ 0.2
CROCCP4-202ENST00000633627 INHBBP09529 407 aa16.32■□□□□ 0.2
CROCCP4-202ENST00000633627 TAS2R43P59537 309 aa16.32■□□□□ 0.2
CROCCP4-202ENST00000633627 GNG3P63215 75 aa16.32■□□□□ 0.2
CROCCP4-202ENST00000633627 ACSM1Q08AH1 577 aa16.32■□□□□ 0.2
CROCCP4-202ENST00000633627 AVPI1Q5T686 147 aa16.32■□□□□ 0.2
CROCCP4-202ENST00000633627 PLCXD3Q63HM9 321 aa16.32■□□□□ 0.2
CROCCP4-202ENST00000633627 ZNF826PQ6ZT77 177 aa16.32■□□□□ 0.2
CROCCP4-202ENST00000633627 FGGYQ96C11 551 aa16.32■□□□□ 0.2
CROCCP4-202ENST00000633627 TIMD4Q96H15 378 aa16.32■□□□□ 0.2
CROCCP4-202ENST00000633627 OR5M11Q96RB7 305 aa16.32■□□□□ 0.2
CROCCP4-202ENST00000633627 YTHDF1Q9BYJ9 559 aaKnown RBP16.32■□□□□ 0.2
CROCCP4-202ENST00000633627 ABCA2Q9BZC7 2435 aa16.32■□□□□ 0.2
CROCCP4-202ENST00000633627 CHST5Q9GZS9 411 aa16.32■□□□□ 0.2
CROCCP4-202ENST00000633627 PLEKHA1Q9HB21 404 aa16.32■□□□□ 0.2
CROCCP4-202ENST00000633627 ANKRD61A6NGH8 418 aa16.31■□□□□ 0.2
CROCCP4-202ENST00000633627 LRRC30A6NM36 301 aa16.31■□□□□ 0.2
CROCCP4-202ENST00000633627 ZNF732B4DXR9 585 aa16.31■□□□□ 0.2
CROCCP4-202ENST00000633627 CYB5R3P00387 301 aaPredicted RBP16.31■□□□□ 0.2
CROCCP4-202ENST00000633627 IGHV2-70P01814 119 aa16.31■□□□□ 0.2
CROCCP4-202ENST00000633627 CFHR2P36980 270 aa16.31■□□□□ 0.2
CROCCP4-202ENST00000633627 GPM6AP51674 278 aa16.31■□□□□ 0.2
CROCCP4-202ENST00000633627 BDH1Q02338 343 aa16.31■□□□□ 0.2
CROCCP4-202ENST00000633627 SPHARQ15513 63 aa16.31■□□□□ 0.2
CROCCP4-202ENST00000633627 UBE2V2Q15819 145 aa16.31■□□□□ 0.2
CROCCP4-202ENST00000633627 ZFP41Q8N8Y5 198 aa16.31■□□□□ 0.2
CROCCP4-202ENST00000633627 OR11L1Q8NGX0 322 aa16.31■□□□□ 0.2
CROCCP4-202ENST00000633627 PP6455Q8WZ26 134 aa16.31■□□□□ 0.2
CROCCP4-202ENST00000633627 HPS1Q92902 700 aa16.31■□□□□ 0.2
CROCCP4-202ENST00000633627 PGLYRP3Q96LB9 341 aa16.31■□□□□ 0.2
CROCCP4-202ENST00000633627 OR51I2Q9H344 312 aa16.31■□□□□ 0.2
CROCCP4-202ENST00000633627 C1orf123Q9NWV4 160 aa16.31■□□□□ 0.2
CROCCP4-202ENST00000633627 RNF7Q9UBF6 113 aa16.31■□□□□ 0.2
CROCCP4-202ENST00000633627 LRRC42Q9Y546 428 aa16.31■□□□□ 0.2
CROCCP4-202ENST00000633627 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.31■□□□□ 0.2
CROCCP4-202ENST00000633627 LRP5LA4QPB2 252 aa16.3■□□□□ 0.2
CROCCP4-202ENST00000633627 A6NLC8 198 aa16.3■□□□□ 0.2
CROCCP4-202ENST00000633627 PLPP2O43688 288 aa16.3■□□□□ 0.2
CROCCP4-202ENST00000633627 FSTL3O95633 263 aa16.3■□□□□ 0.2
CROCCP4-202ENST00000633627 LHBP01229 141 aa16.3■□□□□ 0.2
CROCCP4-202ENST00000633627 CD1AP06126 327 aa16.3■□□□□ 0.2
CROCCP4-202ENST00000633627 CHN2P52757 468 aa16.3■□□□□ 0.2
CROCCP4-202ENST00000633627 GABARAPL2P60520 117 aa16.3■□□□□ 0.2
CROCCP4-202ENST00000633627 ZMYND11Q15326 602 aa16.3■□□□□ 0.2
CROCCP4-202ENST00000633627 FAM201AQ5SY85 155 aa16.3■□□□□ 0.2
CROCCP4-202ENST00000633627 WDR82Q6UXN9 313 aa16.3■□□□□ 0.2
CROCCP4-202ENST00000633627 UTS2BQ765I0 119 aa16.3■□□□□ 0.2
CROCCP4-202ENST00000633627 PEG10Q86TG7 708 aaKnown RBP16.3■□□□□ 0.2
CROCCP4-202ENST00000633627 LRRC28Q86X40 367 aaPredicted RBP16.3■□□□□ 0.2
CROCCP4-202ENST00000633627 C1orf87Q8N0U7 546 aa16.3■□□□□ 0.2
CROCCP4-202ENST00000633627 OR13C3Q8NGS6 347 aa16.3■□□□□ 0.2
CROCCP4-202ENST00000633627 CLDND2Q8NHS1 167 aa16.3■□□□□ 0.2
CROCCP4-202ENST00000633627 GHSRQ92847 366 aa16.3■□□□□ 0.2
CROCCP4-202ENST00000633627 ZNF281Q9Y2X9 895 aa16.3■□□□□ 0.2
CROCCP4-202ENST00000633627 PQLC2LA1A4F0 135 aa16.29■□□□□ 0.2
CROCCP4-202ENST00000633627 CDIPTO14735 213 aa16.29■□□□□ 0.2
CROCCP4-202ENST00000633627 GATBO75879 557 aaKnown RBP16.29■□□□□ 0.2
CROCCP4-202ENST00000633627 SERPINA3P01011 423 aa16.29■□□□□ 0.2
CROCCP4-202ENST00000633627 IRF2P14316 349 aa16.29■□□□□ 0.2
CROCCP4-202ENST00000633627 EEF1B2P24534 225 aaKnown RBP16.29■□□□□ 0.2
CROCCP4-202ENST00000633627 LMO4P61968 165 aa16.29■□□□□ 0.2
CROCCP4-202ENST00000633627 RPS11P62280 158 aaKnown RBP eCLIP16.29■□□□□ 0.2
CROCCP4-202ENST00000633627 BTG1P62324 171 aa16.29■□□□□ 0.2
CROCCP4-202ENST00000633627 KRTAP1-1Q07627 177 aa16.29■□□□□ 0.2
CROCCP4-202ENST00000633627 TMEM249Q2WGJ8 235 aa16.29■□□□□ 0.2
CROCCP4-202ENST00000633627 KCTD8Q6ZWB6 473 aa16.29■□□□□ 0.2
CROCCP4-202ENST00000633627 PARP16Q8N5Y8 322 aa16.29■□□□□ 0.2
CROCCP4-202ENST00000633627 GCSAMQ8N6F7 178 aa16.29■□□□□ 0.2
CROCCP4-202ENST00000633627 SCCPDHQ8NBX0 429 aa16.29■□□□□ 0.2
CROCCP4-202ENST00000633627 GPR148Q8TDV2 347 aa16.29■□□□□ 0.2
CROCCP4-202ENST00000633627 RPL3LQ92901 407 aaKnown RBP16.29■□□□□ 0.2
CROCCP4-202ENST00000633627 TECTBQ96PL2 329 aa16.29■□□□□ 0.2
CROCCP4-202ENST00000633627 CCDC90BQ9GZT6 254 aa16.29■□□□□ 0.2
CROCCP4-202ENST00000633627 TMEM165Q9HC07 324 aa16.29■□□□□ 0.2
CROCCP4-202ENST00000633627 IGKV1-9A0A0C4DH69 117 aa16.28■□□□□ 0.2
CROCCP4-202ENST00000633627 MRPS14O60783 128 aaKnown RBP16.28■□□□□ 0.2
CROCCP4-202ENST00000633627 ZNF20P17024 532 aa16.28■□□□□ 0.2
CROCCP4-202ENST00000633627 CELP19835 753 aa16.28■□□□□ 0.2
CROCCP4-202ENST00000633627 IL2RGP31785 369 aa16.28■□□□□ 0.2
CROCCP4-202ENST00000633627 HOXA4Q00056 320 aaPredicted RBP16.28■□□□□ 0.2
CROCCP4-202ENST00000633627 TMEM155Q4W5P6 130 aa16.28■□□□□ 0.2
CROCCP4-202ENST00000633627 SMR3AQ99954 134 aa16.28■□□□□ 0.2
CROCCP4-202ENST00000633627 NARFLQ9H6Q4 476 aa16.28■□□□□ 0.2
CROCCP4-202ENST00000633627 METTL17Q9H7H0 456 aaPredicted RBP16.28■□□□□ 0.2
CROCCP4-202ENST00000633627 DHDHQ9UQ10 334 aa16.28■□□□□ 0.2
CROCCP4-202ENST00000633627 PPIAL4EA0A075B759 164 aa16.27■□□□□ 0.2
CROCCP4-202ENST00000633627 TRBV5-5A0A0J9YX44 114 aa16.27■□□□□ 0.2
CROCCP4-202ENST00000633627 PPIAL4DF5H284 164 aa16.27■□□□□ 0.2
CROCCP4-202ENST00000633627 ZNF205O95201 554 aa16.27■□□□□ 0.2
CROCCP4-202ENST00000633627 PPIAL4FP0DN26 164 aa16.27■□□□□ 0.2
CROCCP4-202ENST00000633627 ATF1P18846 271 aa16.27■□□□□ 0.2
CROCCP4-202ENST00000633627 MDH2P40926 338 aaKnown RBP16.27■□□□□ 0.2
CROCCP4-202ENST00000633627 MAP2K4P45985 399 aa16.27■□□□□ 0.2
CROCCP4-202ENST00000633627 MED22Q15528 200 aa16.27■□□□□ 0.2
CROCCP4-202ENST00000633627 TBCEQ15813 527 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms