RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 PRR32B1ATL7 298 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 SHISA9B4DS77 424 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 LRRN3E7EW58 273 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 IMPA2O14732 288 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 GSTZ1O43708 216 aaPredicted RBP4.17□□□□□ -1.74
LINC00550-201ENST00000629293 ORC5O43913 435 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 SELENOFO60613 162 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 TXNDC12O95881 172 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 C1QBP02746 253 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 ZNF17P17021 662 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 TALDO1P37837 337 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 EIF1P41567 113 aaKnown RBP4.17□□□□□ -1.74
LINC00550-201ENST00000629293 GBX2P52951 348 aaPredicted RBP4.17□□□□□ -1.74
LINC00550-201ENST00000629293 HCCSP53701 268 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 FOXG1P55316 489 aaPredicted RBP4.17□□□□□ -1.74
LINC00550-201ENST00000629293 CCDC92Q53HC0 331 aaPredicted RBP4.17□□□□□ -1.74
LINC00550-201ENST00000629293 CYB5R2Q6BCY4 276 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 Q6ZT83 130 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 YIPF7Q8N8F6 280 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 ZNF563Q8TA94 476 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 YIPF5Q969M3 257 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 ZNF524Q96C55 264 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 CMTM3Q96MX0 182 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 GFI1Q99684 422 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 ACOXLQ9NUZ1 547 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 RPS6KB2Q9UBS0 482 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 NOSIPQ9Y314 301 aaKnown RBP4.17□□□□□ -1.74
LINC00550-201ENST00000629293 LRP5LA4QPB2 252 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 OR5H1A6NKK0 313 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 GJE1A6NN92 205 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 ATP6V1G2-DDX39BF2Z307 99 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 CTDSPLO15194 276 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 PIN1P1O15428 100 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 MAGEB4O15481 346 aaPredicted RBP4.17□□□□□ -1.74
LINC00550-201ENST00000629293 HOXA3O43365 443 aaPredicted RBP4.17□□□□□ -1.74
LINC00550-201ENST00000629293 FZD7O75084 574 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 ARL6IP5O75915 188 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 GLCEO94923 617 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 UBL3O95164 117 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 USF1P22415 310 aaPredicted RBP4.17□□□□□ -1.74
LINC00550-201ENST00000629293 IGHV1-2P23083 117 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 ERP29P30040 261 aaKnown RBP4.17□□□□□ -1.74
LINC00550-201ENST00000629293 NAA10P41227 235 aaPredicted RBP4.17□□□□□ -1.74
LINC00550-201ENST00000629293 MMP15P51511 669 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 PRPS1P60891 318 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 MRPS15P82914 257 aaKnown RBP4.17□□□□□ -1.74
LINC00550-201ENST00000629293 LGALS3BPQ08380 585 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 ZNF74Q16587 644 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 LIPNQ5VXI9 398 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 WBP2NLQ6ICG8 309 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 BAIAP2L2Q6UXY1 529 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 MOSPD2Q8NHP6 518 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 RNF138Q8WVD3 245 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 RGP1Q92546 391 aaPredicted RBP4.17□□□□□ -1.74
LINC00550-201ENST00000629293 APH1AQ96BI3 265 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 RASD2Q96D21 266 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 FOXN4Q96NZ1 517 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 NMNAT3Q96T66 252 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 TMEM246Q9BRR3 403 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 OR11A1Q9GZK7 315 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 NARFLQ9H6Q4 476 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 LPAR2Q9HBW0 351 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 CBLN4Q9NTU7 201 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 UPB1Q9UBR1 384 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 SPATA2Q9UM82 520 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 MOKQ9UQ07 419 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 CACNG2Q9Y698 323 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 INMT-MINDY4F8WBC2 141 aa4.16□□□□□ -1.74
LINC00550-201ENST00000629293 MRPL33O75394 65 aaKnown RBP4.16□□□□□ -1.74
LINC00550-201ENST00000629293 KRT33AO76009 404 aa4.16□□□□□ -1.74
LINC00550-201ENST00000629293 ASAH2BP0C7U1 165 aa4.16□□□□□ -1.74
LINC00550-201ENST00000629293 PNMTP11086 282 aa4.16□□□□□ -1.74
LINC00550-201ENST00000629293 HNF1AP20823 631 aa4.16□□□□□ -1.74
LINC00550-201ENST00000629293 CDKN2AP42771 156 aaKnown RBP4.16□□□□□ -1.74
LINC00550-201ENST00000629293 CCR9P51686 369 aa4.16□□□□□ -1.74
LINC00550-201ENST00000629293 EGR4Q05215 589 aa4.16□□□□□ -1.74
LINC00550-201ENST00000629293 FAM120AOSQ5T036 256 aa4.16□□□□□ -1.74
LINC00550-201ENST00000629293 ZNF57Q68EA5 555 aaPredicted RBP4.16□□□□□ -1.74
LINC00550-201ENST00000629293 DGAT2L7PQ6IED9 249 aa4.16□□□□□ -1.74
LINC00550-201ENST00000629293 FAM166AQ6J272 317 aa4.16□□□□□ -1.74
LINC00550-201ENST00000629293 KLHL24Q6TFL4 600 aa4.16□□□□□ -1.74
LINC00550-201ENST00000629293 DOK3Q7L591 496 aa4.16□□□□□ -1.74
LINC00550-201ENST00000629293 OR51L1Q8NGJ5 315 aa4.16□□□□□ -1.74
LINC00550-201ENST00000629293 MSI2Q96DH6 328 aaKnown RBP4.16□□□□□ -1.74
LINC00550-201ENST00000629293 OR14A2Q96R54 314 aa4.16□□□□□ -1.74
LINC00550-201ENST00000629293 TTTY10Q9BZA0 68 aa4.16□□□□□ -1.74
LINC00550-201ENST00000629293 C12orf10Q9HB07 376 aa4.16□□□□□ -1.74
LINC00550-201ENST00000629293 PLEKHA1Q9HB21 404 aa4.16□□□□□ -1.74
LINC00550-201ENST00000629293 SEPSECSQ9HD40 501 aaKnown RBP4.16□□□□□ -1.74
LINC00550-201ENST00000629293 RPRD1BQ9NQG5 326 aaKnown RBP4.16□□□□□ -1.74
LINC00550-201ENST00000629293 ZNF275Q9NSD4 429 aaPredicted RBP4.16□□□□□ -1.74
LINC00550-201ENST00000629293 MCUBQ9NWR8 336 aa4.16□□□□□ -1.74
LINC00550-201ENST00000629293 A0A0B4J203 849 aa4.16□□□□□ -1.74
LINC00550-201ENST00000629293 TEX13CA0A0J9YWL9 993 aa4.16□□□□□ -1.74
LINC00550-201ENST00000629293 ZNF503-AS2A6NEH8 195 aa4.16□□□□□ -1.74
LINC00550-201ENST00000629293 CENPBD1B2RD01 187 aa4.16□□□□□ -1.74
LINC00550-201ENST00000629293 SMAD9O15198 467 aaKnown RBP4.16□□□□□ -1.74
LINC00550-201ENST00000629293 CD14P08571 375 aa4.16□□□□□ -1.74
LINC00550-201ENST00000629293 UBL4AP11441 157 aa4.16□□□□□ -1.74
LINC00550-201ENST00000629293 RAC2P15153 192 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms