RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 LALBAP00709 142 aa17.07■□□□□ 0.32
PTCD3-220ENST00000627371 CRHBPP24387 322 aa17.07■□□□□ 0.32
PTCD3-220ENST00000627371 IL2RGP31785 369 aa17.07■□□□□ 0.32
PTCD3-220ENST00000627371 GNG3P63215 75 aa17.07■□□□□ 0.32
PTCD3-220ENST00000627371 KRTAP1-1Q07627 177 aa17.07■□□□□ 0.32
PTCD3-220ENST00000627371 ZMYND11Q15326 602 aa17.07■□□□□ 0.32
PTCD3-220ENST00000627371 C11orf53Q8IXP5 236 aa17.07■□□□□ 0.32
PTCD3-220ENST00000627371 OR5A2Q8NGI9 324 aa17.07■□□□□ 0.32
PTCD3-220ENST00000627371 OR51A4Q8NGJ6 313 aa17.07■□□□□ 0.32
PTCD3-220ENST00000627371 OR10AC1Q8NH08 325 aa17.07■□□□□ 0.32
PTCD3-220ENST00000627371 PDCD1LG2Q9BQ51 273 aa17.07■□□□□ 0.32
PTCD3-220ENST00000627371 CDCA4Q9BXL8 241 aa17.07■□□□□ 0.32
PTCD3-220ENST00000627371 CHST5Q9GZS9 411 aa17.07■□□□□ 0.32
PTCD3-220ENST00000627371 GSX1Q9H4S2 264 aaPredicted RBP17.07■□□□□ 0.32
PTCD3-220ENST00000627371 DUSP21Q9H596 190 aa17.07■□□□□ 0.32
PTCD3-220ENST00000627371 GPR173Q9NS66 373 aa17.07■□□□□ 0.32
PTCD3-220ENST00000627371 RNF7Q9UBF6 113 aa17.07■□□□□ 0.32
PTCD3-220ENST00000627371 ERGIC3Q9Y282 383 aa17.07■□□□□ 0.32
PTCD3-220ENST00000627371 ISPDA4D126 451 aa17.06■□□□□ 0.32
PTCD3-220ENST00000627371 ANKRD61A6NGH8 418 aa17.06■□□□□ 0.32
PTCD3-220ENST00000627371 FSTL3O95633 263 aa17.06■□□□□ 0.32
PTCD3-220ENST00000627371 IGHV4-31P0DP07 118 aa17.06■□□□□ 0.32
PTCD3-220ENST00000627371 GPM6AP51674 278 aa17.06■□□□□ 0.32
PTCD3-220ENST00000627371 WNT4P56705 351 aa17.06■□□□□ 0.32
PTCD3-220ENST00000627371 TMEM155Q4W5P6 130 aa17.06■□□□□ 0.32
PTCD3-220ENST00000627371 RBM48Q5RL73 367 aaKnown RBP17.06■□□□□ 0.32
PTCD3-220ENST00000627371 CLEC9AQ6UXN8 241 aa17.06■□□□□ 0.32
PTCD3-220ENST00000627371 ZNF826PQ6ZT77 177 aa17.06■□□□□ 0.32
PTCD3-220ENST00000627371 KCTD8Q6ZWB6 473 aa17.06■□□□□ 0.32
PTCD3-220ENST00000627371 NANOGP1Q8N7R0 232 aa17.06■□□□□ 0.32
PTCD3-220ENST00000627371 SGCDQ92629 289 aa17.06■□□□□ 0.32
PTCD3-220ENST00000627371 SMIM19Q96E16 107 aa17.06■□□□□ 0.32
PTCD3-220ENST00000627371 GAL3ST1Q99999 423 aa17.06■□□□□ 0.32
PTCD3-220ENST00000627371 DOCK11Q5JSL3 2073 aa17.05■□□□□ 0.32
PTCD3-220ENST00000627371 hCG_1807616A0A1W2PRN6 198 aa17.05■□□□□ 0.32
PTCD3-220ENST00000627371 ZNF732B4DXR9 585 aa17.05■□□□□ 0.32
PTCD3-220ENST00000627371 OGG1O15527 345 aa17.05■□□□□ 0.32
PTCD3-220ENST00000627371 GATBO75879 557 aaKnown RBP17.05■□□□□ 0.32
PTCD3-220ENST00000627371 LY6G6DO95868 133 aa17.05■□□□□ 0.32
PTCD3-220ENST00000627371 HEXAP06865 529 aa17.05■□□□□ 0.32
PTCD3-220ENST00000627371 MDH2P40926 338 aaKnown RBP17.05■□□□□ 0.32
PTCD3-220ENST00000627371 GZMKP49863 264 aa17.05■□□□□ 0.32
PTCD3-220ENST00000627371 TAS2R43P59537 309 aa17.05■□□□□ 0.32
PTCD3-220ENST00000627371 LMO4P61968 165 aa17.05■□□□□ 0.32
PTCD3-220ENST00000627371 DMRTC1Q5HYR2 192 aa17.05■□□□□ 0.32
PTCD3-220ENST00000627371 LRRC28Q86X40 367 aaPredicted RBP17.05■□□□□ 0.32
PTCD3-220ENST00000627371 MUC20Q8N307 709 aaPredicted RBP17.05■□□□□ 0.32
PTCD3-220ENST00000627371 OR13C3Q8NGS6 347 aa17.05■□□□□ 0.32
PTCD3-220ENST00000627371 PP6455Q8WZ26 134 aa17.05■□□□□ 0.32
PTCD3-220ENST00000627371 ADAT3Q96EY9 351 aaPredicted RBP17.05■□□□□ 0.32
PTCD3-220ENST00000627371 TECTBQ96PL2 329 aa17.05■□□□□ 0.32
PTCD3-220ENST00000627371 MND1Q9BWT6 205 aa17.05■□□□□ 0.32
PTCD3-220ENST00000627371 ERVK-18Q9QC07 812 aa17.05■□□□□ 0.32
PTCD3-220ENST00000627371 BLOC1S6Q9UL45 172 aa17.05■□□□□ 0.32
PTCD3-220ENST00000627371 SIRT4Q9Y6E7 314 aaPredicted RBP17.05■□□□□ 0.32
PTCD3-220ENST00000627371 MTORP42345 2549 aa17.05■□□□□ 0.32
PTCD3-220ENST00000627371 PPIAL4EA0A075B759 164 aa17.04■□□□□ 0.32
PTCD3-220ENST00000627371 PPIAL4DF5H284 164 aa17.04■□□□□ 0.32
PTCD3-220ENST00000627371 CDIPTO14735 213 aa17.04■□□□□ 0.32
PTCD3-220ENST00000627371 RGS10O43665 173 aa17.04■□□□□ 0.32
PTCD3-220ENST00000627371 CD5LO43866 347 aa17.04■□□□□ 0.32
PTCD3-220ENST00000627371 SERPINA3P01011 423 aa17.04■□□□□ 0.32
PTCD3-220ENST00000627371 IGHV2-5P01817 119 aa17.04■□□□□ 0.32
PTCD3-220ENST00000627371 PPIAL4FP0DN26 164 aa17.04■□□□□ 0.32
PTCD3-220ENST00000627371 IRF3Q14653 427 aa17.04■□□□□ 0.32
PTCD3-220ENST00000627371 FAM201AQ5SY85 155 aa17.04■□□□□ 0.32
PTCD3-220ENST00000627371 WDR82Q6UXN9 313 aa17.04■□□□□ 0.32
PTCD3-220ENST00000627371 SPICQ8N5J4 248 aa17.04■□□□□ 0.32
PTCD3-220ENST00000627371 GCSAMQ8N6F7 178 aa17.04■□□□□ 0.32
PTCD3-220ENST00000627371 SCCPDHQ8NBX0 429 aa17.04■□□□□ 0.32
PTCD3-220ENST00000627371 RPL3LQ92901 407 aaKnown RBP17.04■□□□□ 0.32
PTCD3-220ENST00000627371 RAB39BQ96DA2 213 aa17.04■□□□□ 0.32
PTCD3-220ENST00000627371 C1orf159Q96HA4 380 aa17.04■□□□□ 0.32
PTCD3-220ENST00000627371 OR51I2Q9H344 312 aa17.04■□□□□ 0.32
PTCD3-220ENST00000627371 ZNF665Q9H7R5 613 aa17.04■□□□□ 0.32
PTCD3-220ENST00000627371 UBAP1Q9NZ09 502 aa17.04■□□□□ 0.32
PTCD3-220ENST00000627371 PPIAL4AQ9Y536 164 aa17.04■□□□□ 0.32
PTCD3-220ENST00000627371 PQLC2LA1A4F0 135 aa17.03■□□□□ 0.32
PTCD3-220ENST00000627371 ZNF205O95201 554 aa17.03■□□□□ 0.32
PTCD3-220ENST00000627371 LHBP01229 141 aa17.03■□□□□ 0.32
PTCD3-220ENST00000627371 ZNF20P17024 532 aa17.03■□□□□ 0.32
PTCD3-220ENST00000627371 CFHR2P36980 270 aa17.03■□□□□ 0.32
PTCD3-220ENST00000627371 UBE2V2Q15819 145 aa17.03■□□□□ 0.32
PTCD3-220ENST00000627371 CYB5R2Q6BCY4 276 aa17.03■□□□□ 0.32
PTCD3-220ENST00000627371 DMKNQ6E0U4 476 aaPredicted RBP17.03■□□□□ 0.32
PTCD3-220ENST00000627371 UTS2BQ765I0 119 aa17.03■□□□□ 0.32
PTCD3-220ENST00000627371 LRRC29Q8WV35 223 aa17.03■□□□□ 0.32
PTCD3-220ENST00000627371 RGP1Q92546 391 aaPredicted RBP17.03■□□□□ 0.32
PTCD3-220ENST00000627371 FGGYQ96C11 551 aa17.03■□□□□ 0.32
PTCD3-220ENST00000627371 METTL17Q9H7H0 456 aaPredicted RBP17.03■□□□□ 0.32
PTCD3-220ENST00000627371 TMEM165Q9HC07 324 aa17.03■□□□□ 0.32
PTCD3-220ENST00000627371 SLC7A11Q9UPY5 501 aa17.03■□□□□ 0.32
PTCD3-220ENST00000627371 MT-ND2P03891 347 aa17.02■□□□□ 0.32
PTCD3-220ENST00000627371 HOXA4Q00056 320 aaPredicted RBP17.02■□□□□ 0.32
PTCD3-220ENST00000627371 DOC2BQ14184 412 aa17.02■□□□□ 0.32
PTCD3-220ENST00000627371 CNN3Q15417 329 aaKnown RBP17.02■□□□□ 0.32
PTCD3-220ENST00000627371 ZNF404Q494X3 552 aa17.02■□□□□ 0.32
PTCD3-220ENST00000627371 PRSS48Q7RTY5 328 aa17.02■□□□□ 0.32
PTCD3-220ENST00000627371 ZFP41Q8N8Y5 198 aa17.02■□□□□ 0.32
PTCD3-220ENST00000627371 OR10Z1Q8NGY1 313 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms