RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 DEFB109BQ30KR1 87 aa19.15■□□□□ 0.66
PNKP-220ENST00000627232 DMRTC1Q5HYR2 192 aa19.15■□□□□ 0.66
PNKP-220ENST00000627232 FBXW9Q5XUX1 488 aa19.15■□□□□ 0.66
PNKP-220ENST00000627232 ASCL4Q6XD76 172 aa19.15■□□□□ 0.66
PNKP-220ENST00000627232 ASCC1Q8N9N2 400 aaKnown RBP19.15■□□□□ 0.66
PNKP-220ENST00000627232 SLC6A7Q99884 636 aa19.15■□□□□ 0.66
PNKP-220ENST00000627232 LRFN3Q9BTN0 628 aa19.15■□□□□ 0.66
PNKP-220ENST00000627232 DLL4Q9NR61 685 aa19.15■□□□□ 0.66
PNKP-220ENST00000627232 PRSS50Q9UI38 385 aa19.15■□□□□ 0.66
PNKP-220ENST00000627232 BOLA1Q9Y3E2 137 aa19.15■□□□□ 0.66
PNKP-220ENST00000627232 ZNF816-ZNF321PA0A0X1KG74 233 aa19.14■□□□□ 0.65
PNKP-220ENST00000627232 OR14I1A6ND48 311 aa19.14■□□□□ 0.65
PNKP-220ENST00000627232 SS18L1O75177 396 aaPredicted RBP19.14■□□□□ 0.65
PNKP-220ENST00000627232 CA11O75493 328 aa19.14■□□□□ 0.65
PNKP-220ENST00000627232 SERPINA2P20848 420 aa19.14■□□□□ 0.65
PNKP-220ENST00000627232 CPT2P23786 658 aa19.14■□□□□ 0.65
PNKP-220ENST00000627232 RBP2P50120 134 aa19.14■□□□□ 0.65
PNKP-220ENST00000627232 RTL6Q6ICC9 239 aa19.14■□□□□ 0.65
PNKP-220ENST00000627232 GVQW1Q8N7I0 195 aa19.14■□□□□ 0.65
PNKP-220ENST00000627232 OR4S1Q8NGB4 309 aa19.14■□□□□ 0.65
PNKP-220ENST00000627232 OR1K1Q8NGR3 316 aa19.14■□□□□ 0.65
PNKP-220ENST00000627232 BORCS8Q96FH0 119 aa19.14■□□□□ 0.65
PNKP-220ENST00000627232 OCSTAMPQ9BR26 566 aa19.14■□□□□ 0.65
PNKP-220ENST00000627232 METTL9Q9H1A3 318 aa19.14■□□□□ 0.65
PNKP-220ENST00000627232 CLCF1Q9UBD9 225 aa19.14■□□□□ 0.65
PNKP-220ENST00000627232 MGAT4CQ9UBM8 478 aa19.14■□□□□ 0.65
PNKP-220ENST00000627232 KCNN3Q9UGI6 736 aa19.14■□□□□ 0.65
PNKP-220ENST00000627232 SLC7A11Q9UPY5 501 aa19.14■□□□□ 0.65
PNKP-220ENST00000627232 RTTNQ86VV8 2226 aa19.13■□□□□ 0.65
PNKP-220ENST00000627232 TMEM82A0PJX8 343 aa19.13■□□□□ 0.65
PNKP-220ENST00000627232 AQP7O14520 342 aa19.13■□□□□ 0.65
PNKP-220ENST00000627232 CD79AP11912 226 aa19.13■□□□□ 0.65
PNKP-220ENST00000627232 FUT6P51993 359 aa19.13■□□□□ 0.65
PNKP-220ENST00000627232 PLP2Q04941 152 aa19.13■□□□□ 0.65
PNKP-220ENST00000627232 PPA1Q15181 289 aa19.13■□□□□ 0.65
PNKP-220ENST00000627232 ACTBL2Q562R1 376 aa19.13■□□□□ 0.65
PNKP-220ENST00000627232 P4HA3Q7Z4N8 544 aa19.13■□□□□ 0.65
PNKP-220ENST00000627232 APOBEC3DQ96AK3 386 aaPredicted RBP19.13■□□□□ 0.65
PNKP-220ENST00000627232 ARHGAP5-AS1Q96IT6 56 aa19.13■□□□□ 0.65
PNKP-220ENST00000627232 GON7Q9BXV9 100 aa19.13■□□□□ 0.65
PNKP-220ENST00000627232 KCNMB2Q9Y691 235 aa19.13■□□□□ 0.65
PNKP-220ENST00000627232 SERPINA5P05154 406 aa19.12■□□□□ 0.65
PNKP-220ENST00000627232 TMEM225BP0DP42 221 aa19.12■□□□□ 0.65
PNKP-220ENST00000627232 ATP1B3P54709 279 aa19.12■□□□□ 0.65
PNKP-220ENST00000627232 RAB1AP62820 205 aa19.12■□□□□ 0.65
PNKP-220ENST00000627232 LAMTOR1Q6IAA8 161 aa19.12■□□□□ 0.65
PNKP-220ENST00000627232 NLRC3Q7RTR2 1065 aa19.12■□□□□ 0.65
PNKP-220ENST00000627232 OR10K1Q8NGX5 313 aa19.12■□□□□ 0.65
PNKP-220ENST00000627232 NANOS1Q8WY41 292 aaKnown RBP19.12■□□□□ 0.65
PNKP-220ENST00000627232 BCL2L2Q92843 193 aaPredicted RBP19.12■□□□□ 0.65
PNKP-220ENST00000627232 C12orf49Q9H741 205 aa19.12■□□□□ 0.65
PNKP-220ENST00000627232 FAM230AA0A1W2PPH8 454 aa19.11■□□□□ 0.65
PNKP-220ENST00000627232 ZNF503-AS2A6NEH8 195 aa19.11■□□□□ 0.65
PNKP-220ENST00000627232 SERPINE3A8MV23 424 aa19.11■□□□□ 0.65
PNKP-220ENST00000627232 ZNF780AO75290 641 aaPredicted RBP19.11■□□□□ 0.65
PNKP-220ENST00000627232 GIPP09681 153 aaPredicted RBP19.11■□□□□ 0.65
PNKP-220ENST00000627232 BLVRBP30043 206 aaPredicted RBP19.11■□□□□ 0.65
PNKP-220ENST00000627232 CXADRP78310 365 aa19.11■□□□□ 0.65
PNKP-220ENST00000627232 NDUFA5Q16718 116 aa19.11■□□□□ 0.65
PNKP-220ENST00000627232 Q5BKY6 102 aa19.11■□□□□ 0.65
PNKP-220ENST00000627232 ZDHHC22Q8N966 263 aa19.11■□□□□ 0.65
PNKP-220ENST00000627232 OR13C8Q8NGS7 320 aa19.11■□□□□ 0.65
PNKP-220ENST00000627232 POM121L2Q96KW2 1035 aa19.11■□□□□ 0.65
PNKP-220ENST00000627232 Q96M66 194 aa19.11■□□□□ 0.65
PNKP-220ENST00000627232 REPIN1Q9BWE0 567 aaKnown RBP19.11■□□□□ 0.65
PNKP-220ENST00000627232 PECRQ9BY49 303 aa19.11■□□□□ 0.65
PNKP-220ENST00000627232 ELL3Q9HB65 397 aaPredicted RBP19.11■□□□□ 0.65
PNKP-220ENST00000627232 IGKV1-27A0A075B6S5 117 aa19.1■□□□□ 0.65
PNKP-220ENST00000627232 IL18BPO95998 194 aa19.1■□□□□ 0.65
PNKP-220ENST00000627232 MALLQ13021 153 aa19.1■□□□□ 0.65
PNKP-220ENST00000627232 ARFRP1Q13795 201 aa19.1■□□□□ 0.65
PNKP-220ENST00000627232 OR52W1Q6IF63 320 aa19.1■□□□□ 0.65
PNKP-220ENST00000627232 MOB3CQ70IA8 216 aa19.1■□□□□ 0.65
PNKP-220ENST00000627232 RTN4RL2Q86UN3 420 aa19.1■□□□□ 0.65
PNKP-220ENST00000627232 C9orf62Q8N4C0 152 aa19.1■□□□□ 0.65
PNKP-220ENST00000627232 PXT1Q8NFP0 134 aa19.1■□□□□ 0.65
PNKP-220ENST00000627232 OR52B4Q8NGK2 314 aa19.1■□□□□ 0.65
PNKP-220ENST00000627232 ZNF431Q8TF32 576 aaPredicted RBP19.1■□□□□ 0.65
PNKP-220ENST00000627232 ST8SIA4Q92187 359 aa19.1■□□□□ 0.65
PNKP-220ENST00000627232 POFUT1Q9H488 388 aa19.1■□□□□ 0.65
PNKP-220ENST00000627232 OPA3Q9H6K4 179 aa19.1■□□□□ 0.65
PNKP-220ENST00000627232 IL36GQ9NZH8 169 aa19.1■□□□□ 0.65
PNKP-220ENST00000627232 TNRC6AQ8NDV7 1962 aaKnown RBP19.1■□□□□ 0.65
PNKP-220ENST00000627232 C5orf49A4QMS7 147 aa19.1■□□□□ 0.65
PNKP-220ENST00000627232 RAD51DO75771 328 aa19.1■□□□□ 0.65
PNKP-220ENST00000627232 OR2A4O95047 310 aa19.1■□□□□ 0.65
PNKP-220ENST00000627232 DNASE1P24855 282 aa19.1■□□□□ 0.65
PNKP-220ENST00000627232 HRH1P35367 487 aa19.1■□□□□ 0.65
PNKP-220ENST00000627232 RAP2BP61225 183 aa19.1■□□□□ 0.65
PNKP-220ENST00000627232 RSU1Q15404 277 aa19.1■□□□□ 0.65
PNKP-220ENST00000627232 SCGB2B2Q4G0G5 96 aa19.1■□□□□ 0.65
PNKP-220ENST00000627232 VAX1Q5SQQ9 334 aa19.1■□□□□ 0.65
PNKP-220ENST00000627232 ATPAF1Q5TC12 328 aaPredicted RBP19.1■□□□□ 0.65
PNKP-220ENST00000627232 CD163Q86VB7 1156 aa19.1■□□□□ 0.65
PNKP-220ENST00000627232 OR4K15Q8NH41 348 aa19.1■□□□□ 0.65
PNKP-220ENST00000627232 PIGCQ92535 297 aa19.1■□□□□ 0.65
PNKP-220ENST00000627232 SNAPC3Q92966 411 aa19.1■□□□□ 0.65
PNKP-220ENST00000627232 SARAFQ96BY9 339 aa19.1■□□□□ 0.65
PNKP-220ENST00000627232 OR2A7Q96R45 310 aa19.1■□□□□ 0.65
PNKP-220ENST00000627232 EIF3KQ9UBQ5 218 aaKnown RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms